Gene: PGR142G1779

General Information

Structural Information

  • Species Punica granatum
  • Gene Identifier PGR142G1779
  • Transcript Identifier PGR142G1779.01
  • Gene Type Coding gene
  • Location NC_045128.1 : 3886399-3892104 : negative

Gene Family Information

  • ID HOM05D001816
  • #Genes/#Species 361/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • pid XP_031380423.1
  • name LOC116195399
  • name XM_031524563.1
  • id gene-LOC116195399
  • uniprot A0A6P8CID2

Descriptions

  • product alanine--tRNA ligase, chloroplastic/mitochondrial
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009793
ISO
PLAZA Integrative Orthologyembryo development ending in seed dormancy AT5G22800
GO:0043039
IEA
GOA DatabasetRNA aminoacylation
GO:0043039
IEA
InterProtRNA aminoacylation
GO:0006412
IEA
GOA Databasetranslation
GO:0006419
IEA
GOA Databasealanyl-tRNA aminoacylation
GO:0006419
IEA
InterProalanyl-tRNA aminoacylation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005524
IEA
GOA DatabaseATP binding
GO:0005524
IEA
InterProATP binding
GO:0003676
IEA
GOA Databasenucleic acid binding
GO:0003676
IEA
InterPronucleic acid binding
GO:0004812
IEA
GOA Databaseaminoacyl-tRNA ligase activity
GO:0004812
IEA
InterProaminoacyl-tRNA ligase activity
GO:0000049
IEA
GOA DatabasetRNA binding
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0000166
IEA
InterPronucleotide binding
GO:0003723
IEA
GOA DatabaseRNA binding
GO:0016874
IEA
GOA Databaseligase activity
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0008270
IEA
GOA Databasezinc ion binding
GO:0004813
IEA
GOA Databasealanine-tRNA ligase activity
GO:0004813
IEA
InterProalanine-tRNA ligase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009570
ISO
PLAZA Integrative Orthologychloroplast stroma AT5G22800
GO:0005737
IEA
GOA Databasecytoplasm
GO:0005737
IEA
InterProcytoplasm
GO:0009536
IEA
GOA Databaseplastid
GO:0009507
IEA
GOA Databasechloroplast
GO:0005739
IEA
GOA Databasemitochondrion

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR003156 DHHA1 domain
IPR002318 Alanine-tRNA ligase, class IIc
IPR009000 Translation protein, beta-barrel domain superfamily
IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal
IPR012947 Threonyl/alanyl tRNA synthetase, SAD
IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily
IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily
Mapman id Description
17.2.1 Protein biosynthesis.aminoacyl-tRNA synthetase activities.alanine-tRNA ligase