Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra02G0154300 Salix brachista HOM05D001413 ORTHO05D349192 3.1e-48 195.3 135 100.0
Sabra14G0096500 Salix brachista HOM05D001413 ORTHO05D001385 1.0e-11 73.9 39 92.3
Potri.014G129900 Populus trichocarpa HOM05D001413 ORTHO05D001385 7.4e-10 67.8 35 94.3
QL12p028557 Quercus lobata HOM05D001413 ORTHO05D001385 1.3e-09 67.0 35 91.4
Duzib211G0006 Durio zibethinus HOM05D001413 ORTHO05D001385 1.6e-09 66.6 33 97.0
CANSAT25G2342 Cannabis sativa HOM05D001413 ORTHO05D001385 3.7e-09 65.5 33 93.9
Cfa005920 Carpinus fangiana HOM05D001413 ORTHO05D001385 3.7e-09 65.5 35 88.6
ClCG09G005890 Citrullus lanatus HOM05D001413 ORTHO05D001385 3.7e-09 65.5 35 91.4
Haze_04929 Corylus avellana HOM05D001413 ORTHO05D001385 3.7e-09 65.5 35 88.6
Haze_04930 Corylus avellana HOM05D001413 ORTHO05D001385 3.7e-09 65.5 35 88.6
MELO3C016002.2 Cucumis melo HOM05D001413 ORTHO05D001385 3.7e-09 65.5 35 91.4
CsaV3_7G029260 Cucumis sativus L. HOM05D001413 ORTHO05D001385 3.7e-09 65.5 35 91.4
Manes.05G062400 Manihot esculenta HOM05D001413 ORTHO05D001385 3.7e-09 65.5 35 91.4
Cpa.g.sc19.278 Carica papaya HOM05D001413 ORTHO05D001385 8.2e-09 64.3 35 88.6
CiPaw.07G108100 Carya illinoinensis HOM05D001413 ORTHO05D001385 8.2e-09 64.3 35 85.7
CiPaw.08G095600 Carya illinoinensis HOM05D001413 ORTHO05D001385 8.2e-09 64.3 102 43.1
Sed0014141 Sechium edule HOM05D001413 ORTHO05D001385 8.2e-09 64.3 35 88.6
THA.LOC104825971 Tarenaya hassleriana HOM05D001413 ORTHO05D001385 1.1e-08 63.9 33 90.9
Sed0001749 Sechium edule HOM05D001413 ORTHO05D001385 1.4e-08 63.5 33 90.9
Manes.01G218300 Manihot esculenta HOM05D001413 ORTHO05D001385 1.8e-08 63.2 35 85.7
Eucgr.K03474 Eucalyptus grandis HOM05D001413 ORTHO05D001385 3.1e-08 62.4 33 84.8
Ciclev10021764m.g Citrus clementina HOM05D001413 ORTHO05D001385 5.3e-08 61.6 35 82.9
Lalb_Chr18g0047011 Lupinus albus HOM05D001413 ORTHO05D001385 5.3e-08 61.6 35 80.0
Sabra13G0013600 Salix brachista HOM05D001413 ORTHO05D001385 5.3e-08 61.6 35 82.9
Sabra13G0017700 Salix brachista HOM05D001413 ORTHO05D001385 5.3e-08 61.6 35 82.9
Sed0028034 Sechium edule HOM05D001413 ORTHO05D001385 5.3e-08 61.6 36 80.6
PGR044G2059 Punica granatum HOM05D001413 ORTHO05D001385 9.0e-08 60.8 35 80.0
Potri.005G024600 Populus trichocarpa HOM05D001413 ORTHO05D001385 1.2e-07 60.5 33 84.8
Potri.013G015500 Populus trichocarpa HOM05D001413 ORTHO05D001385 1.2e-07 60.5 33 84.8
Prupe.8G260600 Prunus persica HOM05D001413 ORTHO05D001385 1.2e-07 60.5 35 85.7
Atru.chr5.1153 Acer truncatum HOM05D001413 ORTHO05D001385 2.6e-07 59.3 33 81.8
Manes.09G171000 Manihot esculenta HOM05D001413 ORTHO05D001385 4.5e-07 58.5 35 80.0
A02p24730 Brassica napus HOM05D001413 ORTHO05D001385 7.6e-07 57.8 35 82.9
Eucgr.B01911 Eucalyptus grandis HOM05D001413 ORTHO05D001385 1.0e-06 57.4 35 77.1
PGR083G2148 Punica granatum HOM05D001413 ORTHO05D001385 1.0e-06 57.4 35 77.1
MELO3C015299.2 Cucumis melo HOM05D001413 ORTHO05D001385 1.3e-06 57.0 36 75.0
CsaV3_1G038750 Cucumis sativus L. HOM05D001413 ORTHO05D001385 1.3e-06 57.0 36 75.0
MD03G1287500 Malus domestica HOM05D001413 ORTHO05D001385 1.3e-06 57.0 35 80.0
MD11G1310700 Malus domestica HOM05D001413 ORTHO05D001385 1.3e-06 57.0 35 80.0
Medtr7g108810 Medicago truncatula HOM05D001413 ORTHO05D001385 1.3e-06 57.0 33 84.8
Medtr8g058530 Medicago truncatula HOM05D001413 ORTHO05D001385 1.3e-06 57.0 33 84.8
BcaNung05002 Brassica carinata HOM05D005645 ORTHO05D007156 1.7e-06 56.6 33 84.8
A09p01890 Brassica napus HOM05D001413 ORTHO05D001385 1.7e-06 56.6 35 80.0
C02p39020 Brassica napus HOM05D001413 ORTHO05D001385 1.7e-06 56.6 35 80.0
BolC2t09914H Brassica oleracea HOM05D001413 ORTHO05D001385 1.7e-06 56.6 35 80.0
BolC9t53129H Brassica oleracea HOM05D001413 ORTHO05D001385 1.7e-06 56.6 35 80.0
BraA02t07460Z Brassica rapa HOM05D001413 ORTHO05D001385 1.7e-06 56.6 33 84.8
Ciclev10002007m.g Citrus clementina HOM05D001413 ORTHO05D001385 1.7e-06 56.6 35 77.1
Glyma.19G211100 Glycine max HOM05D001413 ORTHO05D001385 1.7e-06 56.6 30 86.7
Gohir.A13G174500 Gossypium hirsutum HOM05D001413 ORTHO05D001385 1.7e-06 56.6 32 81.2
Lalb_Chr02g0143251 Lupinus albus HOM05D001413 ORTHO05D001385 1.7e-06 56.6 36 77.8
Lalb_Chr21g0306841 Lupinus albus HOM05D001413 ORTHO05D001385 1.7e-06 56.6 36 77.8
AL6G50640 Arabidopsis lyrata HOM05D001413 ORTHO05D001385 2.9e-06 55.8 35 80.0
BcaC03g16125 Brassica carinata HOM05D001413 ORTHO05D001385 2.9e-06 55.8 35 80.0
BcaC03g16126 Brassica carinata HOM05D001413 ORTHO05D001385 2.9e-06 55.8 35 80.0
FAN20G1601 Fragaria x ananassa HOM05D001413 ORTHO05D001385 2.9e-06 55.8 35 77.1
Gohir.A13G109900 Gossypium hirsutum HOM05D001413 ORTHO05D001385 2.9e-06 55.8 32 78.1
arahy.Tifrunner.gnm1.ann1.DYK1KG Arachis hypogaea HOM05D001413 ORTHO05D001385 3.8e-06 55.5 36 75.0
Duzib177G0318 Durio zibethinus HOM05D001413 ORTHO05D001385 3.8e-06 55.5 32 78.1
Gohir.D13G112500 Gossypium hirsutum HOM05D001413 ORTHO05D001385 3.8e-06 55.5 32 78.1
Gorai.013G126300 Gossypium raimondii HOM05D001413 ORTHO05D001385 3.8e-06 55.5 32 78.1
Nn3g21473 Nelumbo nucifera HOM05D001413 ORTHO05D001385 3.8e-06 55.5 32 78.1
Psat6g150760 Pisum sativum HOM05D001413 ORTHO05D001385 3.8e-06 55.5 36 77.8
Aa31LG5G2070 Aethionema arabicum HOM05D001413 ORTHO05D001385 4.9e-06 55.1 29 86.2
AT1G02840 Arabidopsis thaliana HOM05D001413 ORTHO05D001385 4.9e-06 55.1 35 77.1
Duzib133G0003 Durio zibethinus HOM05D001413 ORTHO05D001385 4.9e-06 55.1 27 96.3
FvH4_2g25670 Fragaria vesca HOM05D001413 ORTHO05D001385 4.9e-06 55.1 35 77.1
FAN24G0529 Fragaria x ananassa HOM05D001413 ORTHO05D001385 4.9e-06 55.1 35 77.1
Potri.002G205025 Populus trichocarpa HOM05D001413 ORTHO05D001385 4.9e-06 55.1 28 89.3
RcHm_v2.0_Chr6g0293931 Rosa chinensis HOM05D001413 ORTHO05D001385 4.9e-06 55.1 35 77.1
Sp6g02340 Schrenkiella parvula HOM05D001413 ORTHO05D001385 4.9e-06 55.1 29 86.2
Thecc.01G299600 Theobroma cacao HOM05D001413 ORTHO05D001385 4.9e-06 55.1 27 96.3
Carub.0001s0196 Capsella rubella HOM05D001413 ORTHO05D001385 6.5e-06 54.7 35 77.1
Medtr1g083400 Medicago truncatula HOM05D001413 ORTHO05D001385 6.5e-06 54.7 36 75.0
HPP92_011377 Vanilla planifolia HOM05D001413 ORTHO05D001385 6.5e-06 54.7 31 80.6
CDE02G4376 Ceratophyllum demersum HOM05D001413 ORTHO05D001385 8.4e-06 54.3 31 80.6
COL.COLO4_10528 Corchorus olitorius HOM05D001413 ORTHO05D001385 8.4e-06 54.3 32 75.0
PSO210G4195 Papaver somniferum HOM05D001413 ORTHO05D001385 8.4e-06 54.3 31 80.6


User provided reference genes

Program Settings