Gene: HPP92_011377

General Information

Structural Information

  • Species Vanilla planifolia
  • Gene Identifier HPP92_011377
  • Transcript Identifier Vpl05Ag11377.1
  • Gene Type Coding gene
  • Location CM028154.1 : 25894285-25901445 : positive

Gene Family Information

  • ID HOM05D001413
  • #Genes/#Species 444/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Vpl05Ag11377.1
  • pid KAG0480519.1

Descriptions

  • Description Arginine/serine-rich splicing factor, putative ***
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
InterPronucleic acid binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G02840
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT1G02840

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT1G09140
GO:0016607
ISO
PLAZA Integrative Orthologynuclear speck AT1G02840
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT1G09140
GO:0035061
ISO
PLAZA Integrative Orthologyinterchromatin granule AT1G02840

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
IPR000504 RNA recognition motif domain
IPR035979 RNA-binding domain superfamily
Mapman id Description
16.2.6.1 RNA processing.pre-mRNA splicing.spliceosome-associated non-snRNP factor activities.splicing factor (SR30/34)