Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra02G0152300 Salix brachista HOM05D001050 ORTHO05D001270 3.3e-106 388.3 179 100.0
Sabra02G0151700 Salix brachista HOM05D001050 ORTHO05D001270 2.8e-41 172.6 159 56.0
Sabra02G0151400 Salix brachista HOM05D001050 ORTHO05D001270 9.1e-16 87.8 38 100.0
Sabra02G0152000 Salix brachista HOM05D001050 ORTHO05D001270 9.1e-16 87.8 38 100.0
Duzib211G0412 Durio zibethinus HOM05D001050 ORTHO05D001270 5.5e-13 78.6 38 89.5
Actinidia09154 Actinidia chinensis HOM05D001050 ORTHO05D001270 3.4e-10 69.3 31 96.8
COL.COLO4_23397 Corchorus olitorius HOM05D001050 ORTHO05D001270 5.7e-10 68.6 31 96.8
Duzib138G1232 Durio zibethinus HOM05D001050 ORTHO05D001270 5.7e-10 68.6 31 96.8
Gohir.A11G115800 Gossypium hirsutum HOM05D001050 ORTHO05D001270 5.7e-10 68.6 31 96.8
Gohir.A12G010000 Gossypium hirsutum HOM05D001050 ORTHO05D001270 5.7e-10 68.6 31 96.8
Gohir.D11G120700 Gossypium hirsutum HOM05D001050 ORTHO05D001270 5.7e-10 68.6 31 96.8
Gohir.D12G010100 Gossypium hirsutum HOM05D001050 ORTHO05D001270 5.7e-10 68.6 31 96.8
Gorai.007G129500 Gossypium raimondii HOM05D001050 ORTHO05D001270 5.7e-10 68.6 31 96.8
Gorai.008G010100 Gossypium raimondii HOM05D001050 ORTHO05D001270 5.7e-10 68.6 31 96.8
Manes.05G064900 Manihot esculenta HOM05D001050 ORTHO05D001270 5.7e-10 68.6 31 96.8
Potri.002G207865 Populus trichocarpa HOM05D001050 ORTHO05D001270 5.7e-10 68.6 31 96.8
TWI14G0484 Tripterygium wilfordii HOM05D001050 ORTHO05D001270 5.7e-10 68.6 31 96.8
Lj9A119T26 Lonicera japonica HOM05D001050 ORTHO05D001270 7.5e-10 68.2 31 93.5
CiPaw.07G104200 Carya illinoinensis HOM05D001050 ORTHO05D001270 9.8e-10 67.8 31 93.5
GSVIVG01010945001 Vitis vinifera HOM05D001050 ORTHO05D001270 1.3e-09 67.4 31 93.5
CSS0018737 Camellia sinensis var. sinensis HOM05D001050 ORTHO05D001270 1.7e-09 67.0 31 93.5
Manes.01G216100 Manihot esculenta HOM05D001050 ORTHO05D001270 1.7e-09 67.0 31 93.5
CSS0047629 Camellia sinensis var. sinensis HOM05D001050 ORTHO05D001270 2.2e-09 66.6 31 93.5
FvH4_2g25170 Fragaria vesca HOM05D001050 ORTHO05D001270 2.2e-09 66.6 31 93.5
FAN20G1526 Fragaria x ananassa HOM05D001050 ORTHO05D001270 2.2e-09 66.6 31 93.5
FAN24G1025 Fragaria x ananassa HOM05D001050 ORTHO05D001270 2.2e-09 66.6 31 93.5
FAN27G3053 Fragaria x ananassa HOM05D001050 ORTHO05D001270 2.2e-09 66.6 31 93.5
RcHm_v2.0_Chr6g0293291 Rosa chinensis HOM05D001050 ORTHO05D001270 2.2e-09 66.6 31 93.5
Sabra14G0098600 Salix brachista HOM05D001050 ORTHO05D001270 2.2e-09 66.6 31 93.5
TWI23G0300 Tripterygium wilfordii HOM05D001050 ORTHO05D001270 2.2e-09 66.6 31 93.5
Ciclev10023707m.g Citrus clementina HOM05D001050 ORTHO05D001270 3.7e-09 65.9 31 93.5
Dinv33027 Davidia involucrata HOM05D001050 ORTHO05D001270 3.7e-09 65.9 31 90.3
MD03G1283100 Malus domestica HOM05D001050 ORTHO05D001270 4.9e-09 65.5 31 90.3
MD11G1303400 Malus domestica HOM05D001050 ORTHO05D001270 4.9e-09 65.5 31 90.3
Prupe.8G256500 Prunus persica HOM05D001050 ORTHO05D001270 4.9e-09 65.5 31 90.3
Cfa005975 Carpinus fangiana HOM05D001050 ORTHO05D001270 6.3e-09 65.1 31 90.3
CiPaw.07G104800 Carya illinoinensis HOM05D001050 ORTHO05D001270 6.3e-09 65.1 31 87.1
Rhsim13G0014300 Rhododendron simsii HOM05D001050 ORTHO05D001270 6.3e-09 65.1 31 90.3
RcHm_v2.0_Chr3g0455431 Rosa chinensis HOM05D001050 ORTHO05D001270 6.3e-09 65.1 31 90.3
TAR365G0325 Trochodendron aralioides HOM05D001050 ORTHO05D001270 6.3e-09 65.1 31 90.3
TAR365G0944 Trochodendron aralioides HOM05D001050 ORTHO05D001270 6.3e-09 65.1 31 90.3
vmacro02477 Vaccinium macrocarpon HOM05D001050 ORTHO05D001270 6.3e-09 65.1 31 90.3
Hma1.2p1_1212F.1_g267380 Hydrangea macrophylla HOM05D001050 ORTHO05D001270 8.3e-09 64.7 31 87.1
TAR362G1014 Trochodendron aralioides HOM05D001050 ORTHO05D001270 8.3e-09 64.7 35 80.0
Cpa.g.sc9.199 Carica papaya HOM05D001050 ORTHO05D001270 1.1e-08 64.3 31 87.1
Lj2A1189T45 Lonicera japonica HOM05D001050 ORTHO05D001270 1.1e-08 64.3 31 87.1
Lj1A33G86 Lonicera japonica HOM05D001050 ORTHO05D001270 1.8e-08 63.5 31 83.9
TAR567G0002 Trochodendron aralioides HOM05D001050 ORTHO05D001270 1.8e-08 63.5 31 83.9
TAR633G2499 Trochodendron aralioides HOM05D001050 ORTHO05D001270 1.8e-08 63.5 31 83.9
GSVIVG01031120001 Vitis vinifera HOM05D001050 ORTHO05D001270 1.8e-08 63.5 31 87.1
FvH4_6g06350 Fragaria vesca HOM05D001050 ORTHO05D001270 2.4e-08 63.2 31 83.9
Oeu047455.1 Olea europaea HOM05D001050 ORTHO05D001270 2.4e-08 63.2 31 83.9
Oeu047458.1 Olea europaea HOM05D001050 ORTHO05D001270 2.4e-08 63.2 31 83.9
QL12p026741 Quercus lobata HOM05D001050 ORTHO05D001270 2.4e-08 63.2 30 90.0
Lsat_1_v5_gn_5_106920 Lactuca sativa HOM05D001050 ORTHO05D001270 3.1e-08 62.8 31 80.6
Prupe.6G322300 Prunus persica HOM05D001050 ORTHO05D001270 3.1e-08 62.8 31 87.1
Cfa005974 Carpinus fangiana HOM05D001050 ORTHO05D001270 4.1e-08 62.4 31 87.1
Migut.D00188 Erythranthe guttata HOM05D001050 ORTHO05D001270 4.1e-08 62.4 31 87.1
Glyma.03G212100 Glycine max HOM05D001050 ORTHO05D001270 4.1e-08 62.4 27 96.3
Phvul.001G205000 Phaseolus vulgaris HOM05D001050 ORTHO05D001270 4.1e-08 62.4 27 96.3
CSS0017985 Camellia sinensis var. sinensis HOM05D001050 ORTHO05D001270 5.4e-08 62.0 31 83.9
DCAR_012398 Daucus carota HOM05D001050 ORTHO05D001270 5.4e-08 62.0 31 83.9
Nn3g21414 Nelumbo nucifera HOM05D001050 ORTHO05D001270 5.4e-08 62.0 31 83.9
PGR083G0875 Punica granatum HOM05D001050 ORTHO05D001270 5.4e-08 62.0 31 83.9
Hund18124 Selenicereus undatus HOM05D001050 ORTHO05D001270 5.4e-08 62.0 31 83.9
Lsat_1_v5_gn_9_3041 Lactuca sativa HOM05D001050 ORTHO05D001270 7.0e-08 61.6 31 80.6
Rhsim05G0141400 Rhododendron simsii HOM05D001050 ORTHO05D001270 7.0e-08 61.6 31 83.9
RcHm_v2.0_Chr3g0455461 Rosa chinensis HOM05D001050 ORTHO05D001270 7.0e-08 61.6 31 83.9
THA.LOC104798836 Tarenaya hassleriana HOM05D001050 ORTHO05D001270 7.0e-08 61.6 31 83.9
ClCG09G006140 Citrullus lanatus HOM05D001050 ORTHO05D001270 9.1e-08 61.2 31 87.1
MELO3C016035.2 Cucumis melo HOM05D001050 ORTHO05D001270 9.1e-08 61.2 31 87.1
CsaV3_7G029030 Cucumis sativus L. HOM05D001050 ORTHO05D001270 9.1e-08 61.2 31 87.1
Hma1.2p1_0491F.1_g164380 Hydrangea macrophylla HOM05D001050 ORTHO05D001270 9.1e-08 61.2 31 83.9
Lsat_1_v5_gn_3_19420 Lactuca sativa HOM05D001050 ORTHO05D001270 9.1e-08 61.2 31 80.6
Lsat_1_v5_gn_8_54600 Lactuca sativa HOM05D001050 ORTHO05D001270 9.1e-08 61.2 31 80.6
SalBow3G0309 Salvia bowleyana HOM05D001050 ORTHO05D001270 9.1e-08 61.2 31 83.9
SHI29051 Sapria himalayana HOM05D001050 ORTHO05D001270 9.1e-08 61.2 31 83.9
THA.LOC104817503 Tarenaya hassleriana HOM05D001050 ORTHO05D001270 9.1e-08 61.2 31 83.9
MD12G1215900 Malus domestica HOM05D001050 ORTHO05D001270 1.2e-07 60.8 30 83.3
Oeu024511.1 Olea europaea HOM05D001050 ORTHO05D001270 1.2e-07 60.8 31 80.6
PSO210G5863 Papaver somniferum HOM05D001050 ORTHO05D001270 1.2e-07 60.8 31 83.9
Carub.0005s2942 Capsella rubella HOM05D001050 ORTHO05D001270 1.6e-07 60.5 31 83.9
Cc00_g10480 Coffea canephora HOM05D001050 ORTHO05D001270 1.6e-07 60.5 31 80.6
Lj5g0023439 Lotus japonicus HOM05D001050 ORTHO05D001270 1.6e-07 60.5 29 86.2
Medtr1g083230 Medicago truncatula HOM05D001050 ORTHO05D001270 1.6e-07 60.5 31 83.9
SGA_v2.0_scaffold2G01413 Striga asiatica HOM05D001050 ORTHO05D001270 1.6e-07 60.5 31 80.6
Haze_04873 Corylus avellana HOM05D001050 ORTHO05D001270 2.0e-07 60.1 31 83.9
HanXRQChr06g0163921 Helianthus annuus HOM05D001050 ORTHO05D001270 2.0e-07 60.1 31 77.4
Lalb_Chr04g0259761 Lupinus albus HOM05D001050 ORTHO05D001270 2.0e-07 60.1 29 86.2
MBI19_g44803_MAGBIO Magnolia biondii HOM05D001050 ORTHO05D001270 2.0e-07 60.1 31 80.6
arahy.Tifrunner.gnm1.ann1.3VB9ND Arachis hypogaea HOM05D001050 ORTHO05D001270 2.7e-07 59.7 27 92.6
arahy.Tifrunner.gnm1.ann1.653NH4 Arachis hypogaea HOM05D001050 ORTHO05D001270 2.7e-07 59.7 27 92.6
Cc01_g20570 Coffea canephora HOM05D001050 ORTHO05D001270 2.7e-07 59.7 26 92.3
ECA236G3080 Erigeron canadensis HOM05D001050 ORTHO05D001270 2.7e-07 59.7 31 77.4
ECA247G3400 Erigeron canadensis HOM05D001050 ORTHO05D001270 2.7e-07 59.7 27 81.5
Eucgr.B01921 Eucalyptus grandis HOM05D001050 ORTHO05D001270 2.7e-07 59.7 27 88.9
Lalb_Chr06g0167681 Lupinus albus HOM05D001050 ORTHO05D001270 2.7e-07 59.7 31 80.6
Sed0020319 Sechium edule HOM05D001050 ORTHO05D001270 2.7e-07 59.7 31 83.9
Ah.08g213240 Amaranthus hybridus HOM05D001050 ORTHO05D001270 3.5e-07 59.3 31 80.6
CARHR173040 Cardamine hirsuta HOM05D001050 ORTHO05D001270 3.5e-07 59.3 31 80.6
CDE08G1043 Ceratophyllum demersum HOM05D001050 ORTHO05D001270 3.5e-07 59.3 31 80.6
VMungo1383G2460 Vigna mungo HOM05D001050 ORTHO05D001270 3.5e-07 59.3 26 92.3
Aa31LG10G16590 Aethionema arabicum HOM05D001050 ORTHO05D001270 4.5e-07 58.9 31 80.6
AL5G45550 Arabidopsis lyrata HOM05D001050 ORTHO05D001270 4.5e-07 58.9 31 80.6
AT3G62770 Arabidopsis thaliana HOM05D001050 ORTHO05D001270 4.5e-07 58.9 31 80.6
BcaB02g07319 Brassica carinata HOM05D001050 ORTHO05D001270 4.5e-07 58.9 31 80.6
BcaC07g40763 Brassica carinata HOM05D001050 ORTHO05D001270 4.5e-07 58.9 31 80.6
BcaC08g45237 Brassica carinata HOM05D001050 ORTHO05D001270 4.5e-07 58.9 31 80.6
A04p00530 Brassica napus HOM05D001050 ORTHO05D001270 4.5e-07 58.9 31 80.6
A07p26080 Brassica napus HOM05D001050 ORTHO05D001270 4.5e-07 58.9 31 80.6
C06p28400 Brassica napus HOM05D001050 ORTHO05D001270 4.5e-07 58.9 31 80.6
C08p37530 Brassica napus HOM05D001050 ORTHO05D001270 4.5e-07 58.9 31 80.6
BolC8t51333H Brassica oleracea HOM05D001050 ORTHO05D001270 4.5e-07 58.9 31 80.6
BraA04t15773Z Brassica rapa HOM05D001050 ORTHO05D001270 4.5e-07 58.9 31 80.6
BraA07t30256Z Brassica rapa HOM05D001050 ORTHO05D001270 4.5e-07 58.9 31 80.6
AUR62008597 Chenopodium quinoa HOM05D001050 ORTHO05D001270 4.5e-07 58.9 31 80.6
Ca_10123_v3 Cicer arietinum L. HOM05D001050 ORTHO05D001270 4.5e-07 58.9 31 80.6
Thhalv10005977m.g Eutrema salsugineum HOM05D001050 ORTHO05D001270 4.5e-07 58.9 31 80.6
Lj5g0007910 Lotus japonicus HOM05D001050 ORTHO05D001270 4.5e-07 58.9 31 80.6
MD12G1215700 Malus domestica HOM05D001050 ORTHO05D001270 4.5e-07 58.9 27 88.9
Sp5g00750 Schrenkiella parvula HOM05D001050 ORTHO05D001270 4.5e-07 58.9 31 80.6
TPR.G33973 Trifolium pratense HOM05D001050 ORTHO05D001270 4.5e-07 58.9 29 86.2
TPR.G6103 Trifolium pratense HOM05D001050 ORTHO05D001270 4.5e-07 58.9 31 80.6
unitig_0.g654 Utricularia gibba HOM05D001050 ORTHO05D001270 4.5e-07 58.9 28 85.7
CSS0027759 Camellia sinensis var. sinensis HOM05D001050 ORTHO05D001270 5.9e-07 58.5 27 88.9
Lalb_Chr21g0310641 Lupinus albus HOM05D001050 ORTHO05D001270 5.9e-07 58.5 31 80.6
Potri.014G132300 Populus trichocarpa HOM05D001050 ORTHO05D001270 5.9e-07 58.5 29 82.8
QL03p022522 Quercus lobata HOM05D001050 ORTHO05D001270 5.9e-07 58.5 27 88.9
MSTRG.18175 Avicennia marina HOM05D001050 ORTHO05D001270 7.7e-07 58.2 31 77.4
BcaB02g08099 Brassica carinata HOM05D001050 ORTHO05D001270 1.0e-06 57.8 31 77.4
Lsat_1_v5_gn_8_60780 Lactuca sativa HOM05D001050 ORTHO05D001270 1.0e-06 57.8 31 77.4
Lj1g0005683 Lotus japonicus HOM05D001050 ORTHO05D001270 1.0e-06 57.8 27 85.2
Glyma.19G209200 Glycine max HOM05D001050 ORTHO05D001270 1.3e-06 57.4 27 88.9
Peaxi162Scf00071g00635 Petunia axillaris HOM05D001050 ORTHO05D001270 1.3e-06 57.4 31 77.4
GSVIVG01010943001 Vitis vinifera HOM05D001050 ORTHO05D001270 1.3e-06 57.4 27 88.9
MD04G1202000 Malus domestica HOM05D001050 ORTHO05D001270 1.7e-06 57.0 27 85.2
PSO170G2257 Papaver somniferum HOM05D001050 ORTHO05D001270 1.7e-06 57.0 31 80.6
TPR.G9625 Trifolium pratense HOM05D001050 ORTHO05D001270 1.7e-06 57.0 31 80.6
Actinidia19784 Actinidia chinensis HOM05D001050 ORTHO05D001270 2.3e-06 56.6 31 74.2
EL10Ac7g17487 Beta vulgaris HOM05D001050 ORTHO05D001270 2.3e-06 56.6 31 77.4
Eucgr.K03455 Eucalyptus grandis HOM05D001050 ORTHO05D001270 2.3e-06 56.6 29 79.3
FvH4_6g06370 Fragaria vesca HOM05D001050 ORTHO05D001270 2.3e-06 56.6 31 77.4
Psat6g150280 Pisum sativum HOM05D001050 ORTHO05D001270 2.3e-06 56.6 31 77.4
Aqoxy5G00705 Aquilegia oxysepala HOM05D001050 ORTHO05D001270 2.9e-06 56.2 31 71.0
CANSAT54G2899 Cannabis sativa HOM05D001050 ORTHO05D001270 2.9e-06 56.2 31 74.2
BcaC02g10311 Brassica carinata HOM05D001050 ORTHO05D001270 3.8e-06 55.8 26 88.5
A09p54630 Brassica napus HOM05D001050 ORTHO05D001270 3.8e-06 55.8 31 77.4
C04p30440 Brassica napus HOM05D001050 ORTHO05D001270 3.8e-06 55.8 26 88.5
BolC4t24579H Brassica oleracea HOM05D001050 ORTHO05D001270 3.8e-06 55.8 26 88.5
BraA09t40874Z Brassica rapa HOM05D001050 ORTHO05D001270 3.8e-06 55.8 31 77.4
FAN02G1549 Fragaria x ananassa HOM05D001050 ORTHO05D001270 3.8e-06 55.8 31 77.4
FAN05G0797 Fragaria x ananassa HOM05D001050 ORTHO05D001270 3.8e-06 55.8 31 77.4
Glyma.10G152500 Glycine max HOM05D001050 ORTHO05D001270 3.8e-06 55.8 31 77.4
Glyma.20G235800 Glycine max HOM05D001050 ORTHO05D001270 3.8e-06 55.8 31 77.4
Lalb_Chr18g0047201 Lupinus albus HOM05D001050 ORTHO05D001270 3.8e-06 55.8 31 74.2
AL4G47290 Arabidopsis lyrata HOM05D001050 ORTHO05D001270 5.0e-06 55.5 31 74.2
CiPaw.07G104600 Carya illinoinensis HOM05D001050 ORTHO05D001270 5.0e-06 55.5 29 79.3
Thecc.05G311400 Theobroma cacao HOM05D001050 ORTHO05D001270 5.0e-06 55.5 30 76.7
TWI12G0544 Tripterygium wilfordii HOM05D001050 ORTHO05D001270 5.0e-06 55.5 26 84.6
Aa31LG1G29040 Aethionema arabicum HOM05D001050 ORTHO05D001270 6.6e-06 55.1 31 71.0
CANSAT25G1461 Cannabis sativa HOM05D001050 ORTHO05D001270 6.6e-06 55.1 27 85.2
Eucgr.B01927 Eucalyptus grandis HOM05D001050 ORTHO05D001270 6.6e-06 55.1 27 85.2
Lj5A441G34 Lonicera japonica HOM05D001050 ORTHO05D001270 6.6e-06 55.1 26 84.6
PGSC0003DMG402029595 Solanum tuberosum HOM05D001050 ORTHO05D001270 6.6e-06 55.1 31 71.0
ATR0706G122 Amborella trichopoda HOM05D001050 ORTHO05D001270 8.6e-06 54.7 31 71.0
Aqoxy2G00527 Aquilegia oxysepala HOM05D001050 ORTHO05D001270 8.6e-06 54.7 31 67.7
Ca_09140_v3 Cicer arietinum L. HOM05D001050 ORTHO05D001270 8.6e-06 54.7 31 77.4
Medtr1g088855 Medicago truncatula HOM05D001050 ORTHO05D001270 8.6e-06 54.7 29 79.3
Potri.013G018400 Populus trichocarpa HOM05D001050 ORTHO05D001270 8.6e-06 54.7 27 81.5


User provided reference genes

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