Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra01G0153300 Salix brachista HOM05D003995 ORTHO05D004800 1.2e-231 806.2 412 100.0
Potri.001G187000 Populus trichocarpa HOM05D003995 ORTHO05D004800 2.4e-189 665.6 391 89.0
Manes.04G131700 Manihot esculenta HOM05D003995 ORTHO05D004800 8.2e-137 491.1 394 65.0
Manes.11G036200 Manihot esculenta HOM05D003995 ORTHO05D004800 1.6e-127 460.3 412 61.9
Thecc.06G096000 Theobroma cacao HOM05D003995 ORTHO05D004800 3.2e-125 452.6 389 63.2
COL.COLO4_30474 Corchorus olitorius HOM05D003995 ORTHO05D004800 2.3e-123 446.4 392 63.0
QL05p021104 Quercus lobata HOM05D003995 ORTHO05D004800 1.1e-117 427.6 392 61.0
GSVIVG01017039001 Vitis vinifera HOM05D003995 ORTHO05D004800 1.9e-117 426.8 391 60.6
Prupe.3G063200 Prunus persica HOM05D003995 ORTHO05D004800 2.1e-116 423.3 393 60.1
Actinidia21699 Actinidia chinensis HOM05D003995 ORTHO05D004800 3.4e-114 416.0 392 57.9
FAN02G0974 Fragaria x ananassa HOM05D003995 ORTHO05D004800 1.1e-112 411.0 400 57.0
Duzib235G0154 Durio zibethinus HOM05D003995 ORTHO05D004800 3.2e-112 409.5 392 58.2
RcHm_v2.0_Chr2g0139601 Rosa chinensis HOM05D003995 ORTHO05D004800 3.2e-112 409.5 392 58.2
FAN05G2434 Fragaria x ananassa HOM05D003995 ORTHO05D004800 5.4e-112 408.7 392 57.7
CSS0043166 Camellia sinensis var. sinensis HOM05D003995 ORTHO05D004800 7.0e-112 408.3 393 57.5
Gorai.009G136200 Gossypium raimondii HOM05D003995 ORTHO05D004800 1.2e-111 407.5 392 58.7
FvH4_6g32000 Fragaria vesca HOM05D003995 ORTHO05D004800 1.6e-111 407.1 391 57.3
Cfa002115 Carpinus fangiana HOM05D003995 ORTHO05D004800 2.0e-111 406.8 391 59.1
Gohir.A05G128000 Gossypium hirsutum HOM05D003995 ORTHO05D004800 2.7e-111 406.4 392 58.2
CiPaw.02G147500 Carya illinoinensis HOM05D003995 ORTHO05D004800 1.0e-110 404.4 393 58.3
FAN14G0476 Fragaria x ananassa HOM05D003995 ORTHO05D004800 3.9e-110 402.5 407 55.3
Haze_16334 Corylus avellana HOM05D003995 ORTHO05D004800 8.6e-110 401.4 390 59.2
CSS0042187 Camellia sinensis var. sinensis HOM05D003995 ORTHO05D004800 1.5e-109 400.6 393 57.0
TAR102G0002 Trochodendron aralioides HOM05D003995 ORTHO05D004800 1.5e-109 400.6 397 57.7
TAR624G1104 Trochodendron aralioides HOM05D003995 ORTHO05D004800 1.5e-109 400.6 399 58.6
Gohir.D03G059900 Gossypium hirsutum HOM05D003995 ORTHO05D004800 5.6e-109 398.7 392 58.2
Gohir.A02G119100 Gossypium hirsutum HOM05D003995 ORTHO05D004800 9.5e-109 397.9 392 57.1
Gohir.D05G132500 Gossypium hirsutum HOM05D003995 ORTHO05D004800 1.2e-108 397.5 392 57.9
FAN09G2208 Fragaria x ananassa HOM05D003995 ORTHO05D004800 1.4e-107 394.0 400 55.8
TWI75G1811 Tripterygium wilfordii HOM05D003995 ORTHO05D004800 5.2e-107 392.1 388 57.0
Hma1.2p1_1689F.1_g297670 Hydrangea macrophylla HOM05D003995 ORTHO05D004800 8.9e-107 391.3 390 56.9
Dinv30461 Davidia involucrata HOM05D003995 ORTHO05D004800 7.5e-106 388.3 392 57.4
TWI12G0239 Tripterygium wilfordii HOM05D003995 ORTHO05D004800 1.7e-105 387.1 392 57.4
PGR102G1287 Punica granatum HOM05D003995 ORTHO05D004800 2.2e-105 386.7 394 56.9
Glyma.07G017700 Glycine max HOM05D003995 ORTHO05D004800 2.9e-105 386.3 391 56.0
Lj3g0012728 Lotus japonicus HOM05D003995 ORTHO05D004800 5.4e-104 382.1 392 56.4
Gorai.003G063800 Gossypium raimondii HOM05D003995 ORTHO05D004800 1.2e-103 380.9 378 57.7
MD09G1207100 Malus domestica HOM05D003995 ORTHO05D004800 2.7e-103 379.8 395 56.2
Hma1.2p1_0659F.1_g197350 Hydrangea macrophylla HOM05D003995 ORTHO05D004800 3.5e-103 379.4 391 57.0
DCAR_019957 Daucus carota HOM05D003995 ORTHO05D004800 3.0e-102 376.3 389 56.3
TWI18G0079 Tripterygium wilfordii HOM05D003995 ORTHO05D004800 3.9e-102 375.9 392 55.4
MD17G1187800 Malus domestica HOM05D003995 ORTHO05D004800 6.6e-102 375.2 394 54.8
CiPaw.01G233700 Carya illinoinensis HOM05D003995 ORTHO05D004800 8.6e-102 374.8 392 54.1
Gorai.010G229800 Gossypium raimondii HOM05D003995 ORTHO05D004800 8.6e-102 374.8 392 55.6
Cpa.g.sc109.33 Carica papaya HOM05D003995 ORTHO05D004800 1.1e-101 374.4 378 54.5
CANSAT56G4226 Cannabis sativa HOM05D003995 ORTHO05D004800 3.3e-101 372.9 390 55.9
Atru.chr1.3467 Acer truncatum HOM05D003995 ORTHO05D004800 9.5e-101 371.3 379 58.3
Medtr8g013720 Medicago truncatula HOM05D003995 ORTHO05D004800 9.5e-101 371.3 394 57.1
Dinv38000 Davidia involucrata HOM05D003995 ORTHO05D004800 2.8e-100 369.8 378 57.7
Lalb_Chr25g0280081 Lupinus albus HOM05D003995 ORTHO05D004800 3.6e-100 369.4 392 56.6
Gohir.D06G197450 Gossypium hirsutum HOM05D003995 ORTHO05D004800 1.8e-99 367.1 392 55.1
Ciclev10027380m.g Citrus clementina HOM05D003995 ORTHO05D004800 5.2e-99 365.5 416 53.4
VMungo0331G0049 Vigna mungo HOM05D003995 ORTHO05D004800 2.6e-98 363.2 393 54.5
Oeu050081.1 Olea europaea HOM05D003995 ORTHO05D004800 9.8e-98 361.3 390 55.1
arahy.Tifrunner.gnm1.ann1.8U94IH Arachis hypogaea HOM05D003995 ORTHO05D004800 2.9e-97 359.8 394 52.8
Phvul.010G147000 Phaseolus vulgaris HOM05D003995 ORTHO05D004800 2.9e-97 359.8 392 53.8
Lalb_Chr01g0013091 Lupinus albus HOM05D003995 ORTHO05D004800 4.9e-97 359.0 391 54.5
Nitab4.5_0004354g0010 Nicotiana tabacum HOM05D003995 ORTHO05D004800 8.3e-97 358.2 410 51.7
QL04p048641 Quercus lobata HOM05D003995 ORTHO05D004800 8.3e-97 358.2 378 55.3
arahy.Tifrunner.gnm1.ann1.QE1TJP Arachis hypogaea HOM05D003995 ORTHO05D004800 1.4e-96 357.5 391 52.7
Ca_11524_v3 Cicer arietinum L. HOM05D003995 ORTHO05D004800 1.9e-96 357.1 393 55.5
Cc00_g10390 Coffea canephora HOM05D003995 ORTHO05D004800 4.1e-96 355.9 392 54.1
Eucgr.F03056 Eucalyptus grandis HOM05D003995 ORTHO05D004800 1.2e-95 354.4 393 51.9
Oeu017626.1 Olea europaea HOM05D003995 ORTHO05D004800 2.1e-95 353.6 392 54.8
THA.LOC104817968 Tarenaya hassleriana HOM05D003995 ORTHO05D004800 4.6e-95 352.4 393 53.4
Psat4g198440 Pisum sativum HOM05D003995 ORTHO05D004800 1.0e-94 351.3 393 53.4
Sc12g0009570 Simmondsia chinensis HOM05D003995 ORTHO05D004800 1.3e-94 350.9 389 51.7
Aqoxy7G01498 Aquilegia oxysepala HOM05D003995 ORTHO05D004800 1.7e-94 350.5 415 51.1
PGSC0003DMG400008535 Solanum tuberosum HOM05D003995 ORTHO05D004800 1.7e-94 350.5 390 52.6
Nitab4.5_0002549g0020 Nicotiana tabacum HOM05D003995 ORTHO05D004800 2.3e-94 350.1 389 53.2
PSO210G6397 Papaver somniferum HOM05D003995 ORTHO05D004800 7.3e-93 345.1 399 51.9
PSO210G6330 Papaver somniferum HOM05D003995 ORTHO05D004800 2.1e-92 343.6 400 51.5
Peaxi162Scf00090g00073 Petunia axillaris HOM05D003995 ORTHO05D004800 2.1e-92 343.6 390 52.1
MBI04_g27074_MAGBIO Magnolia biondii HOM05D003266 ORTHO05D003718 4.7e-92 342.4 403 51.9
THA.LOC104810534 Tarenaya hassleriana HOM05D003995 ORTHO05D004800 4.7e-92 342.4 392 51.3
Solyc04g047770.3 Solanum lycopersicum HOM05D003995 ORTHO05D004800 6.2e-92 342.0 390 51.5
TPR.G14825 Trifolium pratense HOM05D003995 ORTHO05D004800 6.2e-92 342.0 399 52.6
Sopen04g017970 Solanum pennellii HOM05D003995 ORTHO05D004800 2.3e-91 340.1 390 51.5
PGR102G1422 Punica granatum HOM05D003995 ORTHO05D004800 5.2e-91 339.0 395 51.9
CAN.G60.5 Capsicum annuum HOM05D003995 ORTHO05D004800 9.9e-90 334.7 390 50.8
Lj4A820G41 Lonicera japonica HOM05D003995 ORTHO05D004800 4.9e-89 332.4 388 52.8
Hund06648 Selenicereus undatus HOM05D003995 ORTHO05D004800 4.9e-89 332.4 389 49.1
Aa31LG8G3420 Aethionema arabicum HOM05D003995 ORTHO05D004800 1.1e-88 331.3 394 51.5
MELO3C012986.2 Cucumis melo HOM05D003995 ORTHO05D004800 1.9e-88 330.5 397 51.6
Rhsim08G0225700 Rhododendron simsii HOM05D003995 ORTHO05D004800 1.9e-88 330.5 390 50.3
Sp3g14640 Schrenkiella parvula HOM05D003995 ORTHO05D004800 2.4e-88 330.1 394 51.5
Carub.0003s1602 Capsella rubella HOM05D003995 ORTHO05D004800 3.2e-88 329.7 395 51.9
Thhalv10020187m.g Eutrema salsugineum HOM05D003995 ORTHO05D004800 4.1e-88 329.3 393 50.1
AL3G29010 Arabidopsis lyrata HOM05D003995 ORTHO05D004800 9.2e-88 328.2 395 52.2
CARHR091480 Cardamine hirsuta HOM05D003995 ORTHO05D004800 9.2e-88 328.2 394 51.5
Eucgr.J02949 Eucalyptus grandis HOM05D003995 ORTHO05D004800 6.0e-87 325.5 394 50.8
BcaB06g25717 Brassica carinata HOM05D003995 ORTHO05D004800 7.8e-87 325.1 394 50.5
A05p33250 Brassica napus HOM05D003995 ORTHO05D004800 1.0e-86 324.7 395 49.9
EL10Ac9g22110 Beta vulgaris HOM05D003995 ORTHO05D004800 2.3e-86 323.6 387 49.6
C05p50240 Brassica napus HOM05D003995 ORTHO05D004800 3.0e-86 323.2 392 49.2
CsaV3_3G023750 Cucumis sativus L. HOM05D003995 ORTHO05D004800 3.9e-86 322.8 397 51.4
BcaC05g28900 Brassica carinata HOM05D003995 ORTHO05D004800 5.1e-86 322.4 394 50.0
BolC5t33775H Brassica oleracea HOM05D003995 ORTHO05D004800 5.1e-86 322.4 394 50.0
AT3G16270 Arabidopsis thaliana HOM05D003995 ORTHO05D004800 2.5e-85 320.1 394 51.0
BraA05t22150Z Brassica rapa HOM05D003995 ORTHO05D004800 4.3e-85 319.3 394 49.7
CSS0032416 Camellia sinensis var. sinensis HOM05D003995 ORTHO05D004800 2.1e-84 317.0 381 49.9
Migut.H00960 Erythranthe guttata HOM05D003995 ORTHO05D004800 2.1e-84 317.0 397 49.4
Glyma.13G355800 Glycine max HOM05D003995 ORTHO05D004800 2.8e-84 316.6 395 49.6
Glyma.08G202900 Glycine max HOM05D003995 ORTHO05D004800 6.2e-84 315.5 391 48.6
MSTRG.23509 Avicennia marina HOM05D003995 ORTHO05D004800 5.8e-82 308.9 393 49.4
AUR62031875 Chenopodium quinoa HOM05D003995 ORTHO05D004800 1.3e-81 307.8 389 47.6
HanXRQChr14g0434431 Helianthus annuus HOM05D003995 ORTHO05D004800 3.2e-80 303.1 398 50.3
Sed0011470 Sechium edule HOM05D003995 ORTHO05D004800 2.7e-79 300.1 402 47.3
Sed0003559 Sechium edule HOM05D003995 ORTHO05D004800 1.3e-73 281.2 397 47.4
VMungo1080G0563 Vigna mungo HOM05D003995 ORTHO05D004800 1.9e-72 277.3 387 46.3
AUR62022169 Chenopodium quinoa HOM05D003995 ORTHO05D004800 4.2e-72 276.2 387 44.7
Actinidia32709 Actinidia chinensis HOM05D003995 ORTHO05D004800 6.6e-70 268.9 348 47.7
Lsat_1_v5_gn_2_39201 Lactuca sativa HOM05D003995 ORTHO05D004800 8.7e-70 268.5 407 46.9
ECA248G2833 Erigeron canadensis HOM05D003995 ORTHO05D004800 5.6e-69 265.8 391 47.3
Hund00665 Selenicereus undatus HOM05D003995 ORTHO05D004800 9.6e-69 265.0 389 43.4
Phvul.005G170500 Phaseolus vulgaris HOM05D003995 ORTHO05D004800 1.6e-68 264.2 393 43.5
Ah.01g005620 Amaranthus hybridus HOM05D003995 ORTHO05D004800 6.2e-68 262.3 392 41.8
ClCG07G013220 Citrullus lanatus HOM05D003995 ORTHO05D004800 6.2e-68 262.3 316 51.9
vmacro18870 Vaccinium macrocarpon HOM05D003995 ORTHO05D004800 8.1e-68 261.9 345 45.5
ATR0705G117 Amborella trichopoda HOM05D003995 ORTHO05D004800 2.6e-66 256.9 409 43.8
SGA_v2.0_scaffold44G16540 Striga asiatica HOM05D003995 ORTHO05D004800 2.6e-66 256.9 397 44.1
Ah.01g021840 Amaranthus hybridus HOM05D003995 ORTHO05D004800 3.8e-65 253.1 380 45.8
SHI11063 Sapria himalayana HOM05D003995 ORTHO05D004800 9.3e-64 248.4 378 43.7
Nn2g11632 Nelumbo nucifera HOM05D003995 ORTHO05D004800 4.6e-63 246.1 363 42.1
HanXRQChr01g0017801 Helianthus annuus HOM05D003995 ORTHO05D004800 1.0e-62 245.0 394 43.1
MBI01_g24453_MAGBIO Magnolia biondii HOM05D003995 ORTHO05D004800 1.8e-62 244.2 332 47.9
SalBow1G2060 Salvia bowleyana HOM05D003995 ORTHO05D004800 1.1e-59 235.0 418 40.4
Os01g0232400 Oryza sativa ssp. japonica HOM05D003995 ORTHO05D004800 1.2e-58 231.5 394 42.4
CDE02G3541 Ceratophyllum demersum HOM05D003995 ORTHO05D004800 3.5e-55 219.9 395 39.2
Zm00001eb339300 Zea mays HOM05D003995 ORTHO05D004800 3.3e-53 213.4 394 40.4
HPP92_008092 Vanilla planifolia HOM05D003995 ORTHO05D004800 1.3e-52 211.5 404 41.1
CDE08G1118 Ceratophyllum demersum HOM05D003995 ORTHO05D004800 1.8e-51 207.6 390 38.7
Glyma.15G018300 Glycine max HOM05D003995 ORTHO05D004800 2.6e-50 203.8 262 46.2
Zm00001eb119170 Zea mays HOM05D003995 ORTHO05D004800 1.8e-46 191.0 392 38.8
SEGI_23305 Sequoiadendron giganteum HOM05D003995 ORTHO05D004800 3.0e-38 163.7 428 33.6
MBI01_g39826_MAGBIO Magnolia biondii HOM05D003995 ORTHO05D004800 2.1e-23 114.4 175 41.7
Mapoly0022s0096 Marchantia polymorpha HOM05D003995 ORTHO05D004800 7.5e-21 105.9 420 29.8
Gorai.003G083400 Gossypium raimondii HOM05D003995 ORTHO05D004800 8.2e-20 102.4 95 57.9
Actinidia39149 Actinidia chinensis HOM05D003995 ORTHO05D004800 4.1e-19 100.1 157 39.5
Gohir.D03G024850 Gossypium hirsutum HOM05D003995 ORTHO05D004800 4.5e-18 96.7 97 55.7
SMO340G0180 Selaginella moellendorffii HOM05D003995 ORTHO05D004800 1.9e-16 91.3 394 26.9
Pp3c2_17390 Physcomitrium patens HOM05D003995 ORTHO05D004800 3.6e-15 87.0 421 28.7
AagrBONN_evm.TU.Sc2ySwM_362.567 Anthoceros agrestis HOM05D003995 ORTHO05D004800 6.1e-15 86.3 443 27.5
Gohir.A06G188875 Gossypium hirsutum HOM05D003995 ORTHO05D004800 1.2e-13 82.0 65 70.8
Nn3g18163 Nelumbo nucifera HOM05D003995 ORTHO05D004800 1.3e-12 78.6 60 63.3
SalBow1G1048 Salvia bowleyana HOM05D003995 ORTHO05D004800 3.7e-12 77.0 55 65.5
SalBow1G5856 Salvia bowleyana HOM05D003995 ORTHO05D004800 3.7e-12 77.0 55 65.5
Pp3c1_18430 Physcomitrium patens HOM05D003995 ORTHO05D004800 1.9e-08 64.7 425 27.1


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