Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra01G0089600 Salix brachista HOM05D005885 ORTHO05D008127 0.0e+00 1204.1 588 100.0
Potri.001G116800 Populus trichocarpa HOM05D005885 ORTHO05D008127 3.6e-279 964.5 523 89.5
Manes.01G072400 Manihot esculenta HOM05D005885 ORTHO05D008127 8.2e-239 830.5 524 75.4
Duzib205G0406 Durio zibethinus HOM05D005885 ORTHO05D008127 1.8e-238 829.3 523 76.7
TWI81G1092 Tripterygium wilfordii HOM05D005885 ORTHO05D008127 1.8e-238 829.3 524 76.9
Cfa012022 Carpinus fangiana HOM05D005885 ORTHO05D008127 4.1e-238 828.2 524 76.3
Thecc.03G262500 Theobroma cacao HOM05D005885 ORTHO05D008127 2.9e-236 822.0 523 74.6
QL12p015122 Quercus lobata HOM05D005885 ORTHO05D008127 1.1e-235 820.1 525 76.6
Atru.chr9.1440 Acer truncatum HOM05D005885 ORTHO05D008127 1.4e-235 819.7 524 75.8
Ciclev10019819m.g Citrus clementina HOM05D005885 ORTHO05D008127 7.2e-235 817.4 535 75.3
CSS0003633 Camellia sinensis var. sinensis HOM05D005885 ORTHO05D008127 1.8e-233 812.8 513 76.6
Eucgr.D01985 Eucalyptus grandis HOM05D005885 ORTHO05D008127 3.0e-233 812.0 519 74.0
Nn4g26386 Nelumbo nucifera HOM05D005885 ORTHO05D008127 8.8e-233 810.4 532 73.5
Gohir.D03G158300 Gossypium hirsutum HOM05D005885 ORTHO05D008127 2.0e-232 809.3 522 74.7
Gorai.003G166800 Gossypium raimondii HOM05D005885 ORTHO05D008127 2.8e-231 805.4 522 74.3
ClCG01G003610 Citrullus lanatus HOM05D005885 ORTHO05D008127 4.1e-230 801.6 514 74.3
CANSAT21G1830 Cannabis sativa HOM05D005885 ORTHO05D008127 2.6e-229 798.9 556 71.4
Sed0024879 Sechium edule HOM05D005885 ORTHO05D008127 2.6e-229 798.9 512 75.2
CsaV3_5G003710 Cucumis sativus L. HOM05D005885 ORTHO05D008127 1.0e-228 797.0 509 74.3
TAR375G0281 Trochodendron aralioides HOM05D005885 ORTHO05D008127 1.0e-228 797.0 551 71.7
MELO3C005584.2 Cucumis melo HOM05D005885 ORTHO05D008127 1.7e-228 796.2 516 74.2
Lalb_Chr09g0324521 Lupinus albus HOM05D005885 ORTHO05D008127 7.2e-227 790.8 512 74.0
MD04G1078900 Malus domestica HOM05D005885 ORTHO05D008127 9.4e-227 790.4 511 75.3
Oeu040058.2 Olea europaea HOM05D005885 ORTHO05D008127 1.6e-226 789.6 514 73.7
arahy.Tifrunner.gnm1.ann1.FFRS2J Arachis hypogaea HOM05D005885 ORTHO05D008127 3.6e-226 788.5 504 73.2
arahy.Tifrunner.gnm1.ann1.J86H7Q Arachis hypogaea HOM05D005885 ORTHO05D008127 3.6e-226 788.5 526 71.9
Hma1.2p1_0138F.1_g063110 Hydrangea macrophylla HOM05D005885 ORTHO05D008127 3.6e-226 788.5 522 75.5
CAN.G630.67 Capsicum annuum HOM05D005885 ORTHO05D008127 6.1e-226 787.7 516 73.8
Haze_09046 Corylus avellana HOM05D005885 ORTHO05D008127 1.8e-225 786.2 524 73.3
FAN04G1127 Fragaria x ananassa HOM05D005885 ORTHO05D008127 3.9e-225 785.0 521 72.4
Cpa.g.sc29.82 Carica papaya HOM05D005885 ORTHO05D008127 6.7e-225 784.3 524 72.9
PGR031G0042 Punica granatum HOM05D005885 ORTHO05D008127 1.5e-224 783.1 508 72.6
Lsat_1_v5_gn_6_9740 Lactuca sativa HOM05D005885 ORTHO05D008127 2.6e-224 782.3 530 71.1
GSVIVG01004905001 Vitis vinifera HOM05D005885 ORTHO05D008127 2.6e-224 782.3 528 74.2
Aqoxy7G00633 Aquilegia oxysepala HOM05D005885 ORTHO05D008127 5.7e-224 781.2 526 71.9
FvH4_5g00790 Fragaria vesca HOM05D005885 ORTHO05D008127 9.7e-224 780.4 518 73.0
PGSC0003DMG400003932 Solanum tuberosum HOM05D005885 ORTHO05D008127 9.7e-224 780.4 510 73.5
FAN08G2136 Fragaria x ananassa HOM05D005885 ORTHO05D000042 2.2e-223 779.2 510 73.1
Psat2g179680 Pisum sativum HOM05D005885 ORTHO05D008127 2.2e-223 779.2 523 70.9
Nitab4.5_0003534g0090 Nicotiana tabacum HOM05D005885 ORTHO05D008127 2.8e-223 778.9 546 70.1
Glyma.11G029500 Glycine max HOM05D005885 ORTHO05D008127 1.1e-222 776.9 523 71.3
Sopen08g027900 Solanum pennellii HOM05D005885 ORTHO05D008127 1.4e-222 776.5 510 73.5
Solyc08g079530.3 Solanum lycopersicum HOM05D005885 ORTHO05D008127 1.8e-222 776.2 510 73.3
THA.LOC104809442 Tarenaya hassleriana HOM05D005885 ORTHO05D008127 1.8e-222 776.2 508 73.4
VMungo1215G0841 Vigna mungo HOM05D005885 ORTHO05D008127 1.8e-222 776.2 522 71.1
RcHm_v2.0_Chr7g0201341 Rosa chinensis HOM05D005885 ORTHO05D008127 2.4e-222 775.8 505 73.9
PSO478G5024 Papaver somniferum HOM05D005885 ORTHO05D008127 3.1e-222 775.4 522 71.3
BolC8t49167H Brassica oleracea HOM05D005885 ORTHO05D008127 4.1e-222 775.0 507 73.8
Nitab4.5_0010237g0040 Nicotiana tabacum HOM05D005885 ORTHO05D008127 1.2e-221 773.5 510 73.1
Sp1g10970 Schrenkiella parvula HOM05D005885 ORTHO05D008127 1.2e-221 773.5 507 73.4
TPR.G19593 Trifolium pratense HOM05D005885 ORTHO05D008127 3.5e-221 771.9 514 71.8
Medtr5g011780 Medicago truncatula HOM05D005885 ORTHO05D008127 1.3e-220 770.0 521 70.2
AT1G12370 Arabidopsis thaliana HOM05D005885 ORTHO05D008127 5.0e-220 768.1 508 72.8
Carub.0001s1203 Capsella rubella HOM05D005885 ORTHO05D008127 5.0e-220 768.1 511 72.2
Migut.A00839 Erythranthe guttata HOM05D005885 ORTHO05D008127 6.5e-220 767.7 523 71.3
Thhalv10007458m.g Eutrema salsugineum HOM05D005885 ORTHO05D008127 6.5e-220 767.7 509 72.9
AL1G23690 Arabidopsis lyrata HOM05D005885 ORTHO05D008127 1.1e-219 766.9 508 72.8
AUR62017386 Chenopodium quinoa HOM05D005885 ORTHO05D008127 1.1e-219 766.9 521 71.2
CiPaw.11G147000 Carya illinoinensis HOM05D005885 ORTHO05D008127 1.4e-219 766.5 485 76.5
Lj2g0010887 Lotus japonicus HOM05D005885 ORTHO05D008127 2.7e-218 762.3 524 71.0
Aa31LG1G2270 Aethionema arabicum HOM05D005885 ORTHO05D008127 6.1e-218 761.1 507 72.2
CARHR012660 Cardamine hirsuta HOM05D005885 ORTHO05D008127 1.8e-217 759.6 507 71.8
A08p32870 Brassica napus HOM05D005885 ORTHO05D008127 3.0e-217 758.8 512 70.5
ECA233G5871 Erigeron canadensis HOM05D005885 ORTHO05D008127 4.4e-216 755.0 518 70.8
MSTRG.25552 Avicennia marina HOM05D005885 ORTHO05D008127 2.2e-215 752.7 528 69.9
BraA08t35209Z Brassica rapa HOM05D005885 ORTHO05D008127 7.0e-214 747.7 512 69.7
SalBow6G1575 Salvia bowleyana HOM05D005885 ORTHO05D008127 4.5e-213 745.0 523 70.0
COL.COLO4_23868 Corchorus olitorius HOM05D005885 ORTHO05D008127 2.9e-212 742.3 499 72.9
Prupe.5G080300 Prunus persica HOM05D005885 ORTHO05D008127 1.6e-210 736.5 517 71.0
HanXRQChr07g0188641 Helianthus annuus HOM05D005885 ORTHO05D008127 2.7e-210 735.7 484 74.0
EL10Ac5g12625 Beta vulgaris HOM05D005885 ORTHO05D008127 2.2e-207 726.1 564 63.8
SGA_v2.0_scaffold120G32808 Striga asiatica HOM05D005885 ORTHO05D008127 1.8e-206 723.0 541 66.2
ATR0810G103 Amborella trichopoda HOM05D005885 ORTHO05D008127 9.1e-206 720.7 514 67.5
Rhsim07G0193500 Rhododendron simsii HOM05D005885 ORTHO05D008127 1.1e-203 713.8 519 68.2
Dinv37758 Davidia involucrata HOM05D005885 ORTHO05D008127 4.2e-203 711.8 469 75.3
PSO782G2305 Papaver somniferum HOM05D005885 ORTHO05D008127 7.2e-203 711.1 522 66.7
unitig_744.g24322 Utricularia gibba HOM05D005885 ORTHO05D008127 2.1e-202 709.5 541 64.5
DCAR_008454 Daucus carota HOM05D005885 ORTHO05D008127 1.7e-199 699.9 516 69.0
CDE12G0141 Ceratophyllum demersum HOM05D005885 ORTHO05D008127 2.8e-199 699.1 497 66.0
Ca_06688_v3 Cicer arietinum L. HOM05D005885 ORTHO05D008127 5.4e-198 694.9 523 65.6
MBI04_g35270_MAGBIO Magnolia biondii HOM05D005885 ORTHO05D008127 2.7e-197 692.6 531 64.8
Hund11561 Selenicereus undatus HOM05D005885 ORTHO05D008127 1.3e-196 690.3 520 65.0
ECA233G1449 Erigeron canadensis HOM05D005885 ORTHO05D008127 8.0e-194 681.0 484 67.8
vmacro00223 Vaccinium macrocarpon HOM05D005885 ORTHO05D008127 2.3e-193 679.5 522 66.3
AagrBONN_evm.TU.Sc2ySwM_117.35 Anthoceros agrestis HOM05D005885 ORTHO05D008127 2.2e-191 672.9 513 63.2
FAN18G2769 Fragaria x ananassa HOM05D005885 ORTHO05D000042 3.1e-190 669.1 521 65.8
Hma1.2p1_0138F.1_g063120 Hydrangea macrophylla HOM05D005885 ORTHO05D008127 1.6e-181 640.2 515 65.4
Lj8C254T7 Lonicera japonica HOM05D005885 ORTHO05D008127 6.0e-181 638.3 397 79.8
Gohir.A03G011600 Gossypium hirsutum HOM05D005885 ORTHO05D008127 2.5e-179 632.9 390 78.7
Mapoly0149s0026 Marchantia polymorpha HOM05D005885 ORTHO05D008127 1.8e-177 626.7 515 58.3
SMO137G0163 Selaginella moellendorffii HOM05D005885 ORTHO05D008127 1.2e-176 624.0 500 59.4
CBR_g17934 Chara braunii HOM05D005885 ORTHO05D008127 1.9e-174 616.7 520 57.5
Peaxi162Scf00271g00133 Petunia axillaris HOM05D005885 ORTHO05D008127 1.7e-172 610.1 510 61.6
Pp3c5_3400 Physcomitrium patens HOM05D005885 ORTHO05D008127 6.6e-172 608.2 500 59.0
Sc07g0009420 Simmondsia chinensis HOM05D005885 ORTHO05D008127 2.5e-171 606.3 400 74.5
C08p15390 Brassica napus HOM05D005885 ORTHO05D008127 8.1e-170 601.3 414 72.0
Phvul.002G059800 Phaseolus vulgaris HOM05D005885 ORTHO05D008127 6.8e-169 598.2 388 74.2
Cc08_g13300 Coffea canephora HOM05D005885 ORTHO05D008127 1.4e-166 590.5 388 74.2
Cre12.g533000 Chlamydomonas reinhardtii HOM05D005885 ORTHO05D008127 6.4e-151 538.5 499 53.9
FAN13G1573 Fragaria x ananassa HOM05D005885 ORTHO05D008127 1.4e-150 537.3 429 62.7
Ah.02g116190 Amaranthus hybridus HOM05D005885 ORTHO05D008127 1.2e-149 534.3 360 70.6
MCO01G340 Micromonas commoda HOM05D005885 ORTHO05D008127 1.8e-145 520.4 504 52.6
BcaB03g13192 Brassica carinata HOM05D005885 ORTHO05D008127 9.9e-144 514.6 357 69.2
Actinidia14469 Actinidia chinensis HOM05D005885 ORTHO05D008127 7.1e-134 481.9 355 68.7
MCO16G424 Micromonas commoda HOM05D005885 ORTHO05D008127 3.5e-133 479.6 509 51.3
Zm00001eb026960 Zea mays HOM05D005885 ORTHO05D008127 6.1e-125 452.2 390 58.2
TAR375G0948 Trochodendron aralioides HOM05D005885 ORTHO05D008127 3.3e-123 446.4 280 75.7
PRCOL_00005710 Prasinoderma coloniale HOM05D005885 ORTHO05D008127 6.3e-122 442.2 501 47.1
Actinidia02084 Actinidia chinensis HOM05D005885 ORTHO05D008127 8.2e-122 441.8 369 62.9
SEGI_07453 Sequoiadendron giganteum HOM05D005885 ORTHO05D008127 2.7e-117 426.8 281 71.2
Haze_26274 Corylus avellana HOM05D005885 ORTHO05D008127 3.6e-117 426.4 467 46.7
HPP92_020977 Vanilla planifolia HOM05D005885 ORTHO05D008127 1.4e-116 424.5 304 65.1
Os10g0167600 Oryza sativa ssp. japonica HOM05D005885 ORTHO05D008127 2.9e-111 406.8 345 59.4
Glyma.01G212300 Glycine max HOM05D005885 ORTHO05D008127 6.5e-87 325.9 213 70.4
AUR62010516 Chenopodium quinoa HOM05D005885 ORTHO05D008127 3.9e-71 273.5 182 70.9
MCO05G034 Micromonas commoda HOM05D005885 ORTHO05D268017 3.9e-63 246.9 563 33.7
Lj8A254T79 Lonicera japonica HOM05D005885 ORTHO05D008127 1.3e-50 205.3 106 84.0
SEGI_03642 Sequoiadendron giganteum HOM05D005885 ORTHO05D008127 1.9e-46 191.4 94 86.2
TAR375G0547 Trochodendron aralioides HOM05D005885 ORTHO05D008127 6.9e-36 156.4 138 63.0
Cc08_g13290 Coffea canephora HOM05D005885 ORTHO05D008127 2.4e-33 147.9 69 88.4
Phvul.002G151001 Phaseolus vulgaris HOM05D005885 ORTHO05D008127 9.3e-33 146.0 93 72.0
Ah.02g116200 Amaranthus hybridus HOM05D005885 ORTHO05D008127 3.5e-32 144.1 69 87.0
QL09p013714 Quercus lobata HOM05D005885 ORTHO05D008127 6.9e-28 129.8 128 54.7
Cre02.g118000 Chlamydomonas reinhardtii HOM05D005885 ORTHO05D044175 1.3e-26 125.6 242 33.9
HanXRQChr10g0306201 Helianthus annuus HOM05D005885 ORTHO05D008127 3.2e-25 120.9 70 84.3
SEGI_07050 Sequoiadendron giganteum HOM05D005885 ORTHO05D008127 4.3e-22 110.5 96 56.2
PRCOL_00007238 Prasinoderma coloniale HOM05D005885 ORTHO05D044175 3.4e-19 100.9 227 30.0
COL.COLO4_29220 Corchorus olitorius HOM05D005885 ORTHO05D008127 2.9e-18 97.8 54 87.0
RcHm_v2.0_Chr7g0201231 Rosa chinensis HOM05D005885 ORTHO05D342624 1.5e-06 58.9 76 44.7
BolC2t10740H Brassica oleracea HOM05D005885 ORTHO05D023940 9.7e-06 56.2 48 54.2


User provided reference genes

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