Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO367G0884 Selaginella moellendorffii HOM05D005873 ORTHO05D007582 0.0e+00 1385.5 699 100.0
AagrBONN_evm.TU.Sc2ySwM_117.2340 Anthoceros agrestis HOM05D005873 ORTHO05D007582 8.6e-203 711.1 670 52.5
Pp3c24_8100 Physcomitrium patens HOM05D005873 ORTHO05D007582 1.8e-200 703.4 673 53.6
ATR0733G019 Amborella trichopoda HOM05D005873 ORTHO05D007582 7.5e-199 698.0 692 50.9
SEGI_08778 Sequoiadendron giganteum HOM05D005873 ORTHO05D007582 3.7e-198 695.7 711 50.9
C02p46710 Brassica napus HOM05D005873 ORTHO05D007582 1.1e-197 694.1 688 51.9
BraA02t07971Z Brassica rapa HOM05D005873 ORTHO05D007582 5.4e-197 691.8 688 52.0
BolC2t10723H Brassica oleracea HOM05D005873 ORTHO05D007582 1.6e-196 690.3 689 51.8
A02p29440 Brassica napus HOM05D005873 ORTHO05D007582 2.7e-196 689.5 688 51.7
AL8G12650 Arabidopsis lyrata HOM05D005873 ORTHO05D007582 3.5e-196 689.1 684 51.8
ECA236G1606 Erigeron canadensis HOM05D005873 ORTHO05D007582 6.0e-196 688.3 694 50.9
Nn1g09089 Nelumbo nucifera HOM05D005873 ORTHO05D007582 5.0e-195 685.3 699 51.2
AT5G45900 Arabidopsis thaliana HOM05D005873 ORTHO05D007582 5.6e-194 681.8 687 50.9
CARHR176060 Cardamine hirsuta HOM05D005873 ORTHO05D007582 5.6e-194 681.8 690 50.6
PGR004G0809 Punica granatum HOM05D005873 ORTHO05D007582 7.3e-194 681.4 683 51.0
Thhalv10000804m.g Eutrema salsugineum HOM05D005873 ORTHO05D007582 2.1e-193 679.9 684 51.3
Nn1g04384 Nelumbo nucifera HOM05D005873 ORTHO05D007582 4.7e-193 678.7 699 50.1
BcaC03g16799 Brassica carinata HOM05D005873 ORTHO05D007582 6.2e-193 678.3 689 51.8
Aqoxy4G00415 Aquilegia oxysepala HOM05D005873 ORTHO05D007582 1.1e-192 677.6 699 50.4
Sed0012124 Sechium edule HOM05D005873 ORTHO05D007582 1.8e-192 676.8 701 50.6
Glyma.12G010000 Glycine max HOM05D005873 ORTHO05D007582 3.1e-192 676.0 678 51.0
COL.COLO4_05490 Corchorus olitorius HOM05D005873 ORTHO05D007582 6.8e-192 674.9 694 51.3
CiPaw.10G058200 Carya illinoinensis HOM05D005873 ORTHO05D007582 1.2e-191 674.1 697 50.1
Lsat_1_v5_gn_7_23000 Lactuca sativa HOM05D005873 ORTHO05D007582 3.4e-191 672.5 700 49.7
THA.LOC104806153 Tarenaya hassleriana HOM05D005873 ORTHO05D007582 3.4e-191 672.5 699 49.5
Aa31LG9G7130 Aethionema arabicum HOM05D005873 ORTHO05D007582 4.4e-191 672.2 697 50.5
Oeu039925.1 Olea europaea HOM05D005873 ORTHO05D007582 4.4e-191 672.2 697 50.4
Eucgr.B01514 Eucalyptus grandis HOM05D005873 ORTHO05D007582 5.8e-191 671.8 704 49.1
TAR627G0247 Trochodendron aralioides HOM05D005873 ORTHO05D007582 1.7e-190 670.2 698 50.1
HanXRQChr05g0156521 Helianthus annuus HOM05D005873 ORTHO05D007582 2.2e-190 669.8 696 50.1
Phvul.011G010700 Phaseolus vulgaris HOM05D005873 ORTHO05D007582 2.2e-190 669.8 694 49.6
GSVIVG01021202001 Vitis vinifera HOM05D005873 ORTHO05D007582 2.2e-190 669.8 699 50.5
PSO541G6035 Papaver somniferum HOM05D005873 ORTHO05D007582 2.9e-190 669.5 707 48.8
TPR.G8345 Trifolium pratense HOM05D005873 ORTHO05D007582 3.7e-190 669.1 693 50.5
Sp2g10820 Schrenkiella parvula HOM05D005873 ORTHO05D007582 4.9e-190 668.7 688 50.3
PSO675G7532 Papaver somniferum HOM05D005873 ORTHO05D007582 1.1e-189 667.5 707 48.8
TWI38G0673 Tripterygium wilfordii HOM05D005873 ORTHO05D007582 1.1e-189 667.5 698 50.3
CANSAT35G0525 Cannabis sativa HOM05D005873 ORTHO05D007582 1.4e-189 667.2 697 49.9
HanXRQChr13g0397371 Helianthus annuus HOM05D005873 ORTHO05D007582 2.4e-189 666.4 696 49.9
Medtr0003s0540 Medicago truncatula HOM05D005873 ORTHO05D007582 2.4e-189 666.4 688 50.9
Solyc11g068930.3 Solanum lycopersicum HOM05D005873 ORTHO05D007582 2.4e-189 666.4 697 49.9
arahy.Tifrunner.gnm1.ann1.IZWY79 Arachis hypogaea HOM05D005873 ORTHO05D007582 5.4e-189 665.2 701 49.2
FAN21G0636 Fragaria x ananassa HOM05D005873 ORTHO05D007582 5.4e-189 665.2 700 50.0
PGSC0003DMG400019634 Solanum tuberosum HOM05D005873 ORTHO05D007582 7.1e-189 664.8 698 49.6
Thecc.06G172000 Theobroma cacao HOM05D005873 ORTHO05D007582 1.6e-188 663.7 694 50.9
Ciclev10014429m.g Citrus clementina HOM05D005873 ORTHO05D007582 2.1e-188 663.3 698 50.3
Gohir.D05G158500 Gossypium hirsutum HOM05D005873 ORTHO05D007582 3.5e-188 662.5 703 49.9
VMungo1127G0781 Vigna mungo HOM05D005873 ORTHO05D007582 3.5e-188 662.5 694 49.6
TWI63G0032 Tripterygium wilfordii HOM05D005873 ORTHO05D007582 4.6e-188 662.1 703 50.2
CSS0045323 Camellia sinensis var. sinensis HOM05D005873 ORTHO05D007582 6.0e-188 661.8 692 49.4
Peaxi162Scf00010g03612 Petunia axillaris HOM05D005873 ORTHO05D007582 6.0e-188 661.8 696 49.7
Ca_21328_v3 Cicer arietinum L. HOM05D005873 ORTHO05D007582 7.8e-188 661.4 692 50.1
Lj3g0011702 Lotus japonicus HOM05D005873 ORTHO05D007582 7.8e-188 661.4 695 49.1
Lalb_Chr03g0024111 Lupinus albus HOM05D005873 ORTHO05D007582 7.8e-188 661.4 695 49.1
Dinv04615 Davidia involucrata HOM05D005873 ORTHO05D007582 1.3e-187 660.6 698 49.9
Duzib192G0329 Durio zibethinus HOM05D005873 ORTHO05D007582 1.3e-187 660.6 698 50.3
Gohir.A05G155800 Gossypium hirsutum HOM05D005873 ORTHO05D007582 1.7e-187 660.2 703 49.9
Gorai.009G163500 Gossypium raimondii HOM05D005873 ORTHO05D007582 1.7e-187 660.2 703 50.1
Potri.004G055600 Populus trichocarpa HOM05D005873 ORTHO05D007582 1.7e-187 660.2 694 49.6
CAN.G689.28 Capsicum annuum HOM05D005873 ORTHO05D007582 3.0e-187 659.4 700 49.9
Sopen11g027640 Solanum pennellii HOM05D005873 ORTHO05D007582 6.6e-187 658.3 698 49.7
SalBow8G4573 Salvia bowleyana HOM05D005873 ORTHO05D007582 8.6e-187 657.9 700 49.6
ClCG01G023710 Citrullus lanatus HOM05D005873 ORTHO05D007582 3.3e-186 656.0 696 49.9
FvH4_3g07910 Fragaria vesca HOM05D005873 ORTHO05D007582 3.3e-186 656.0 700 49.9
CSS0049485 Camellia sinensis var. sinensis HOM05D005873 ORTHO05D007582 4.3e-186 655.6 694 48.8
CsaV3_6G050860 Cucumis sativus L. HOM05D005873 ORTHO05D007582 4.3e-186 655.6 696 49.6
FAN11G2228 Fragaria x ananassa HOM05D005873 ORTHO05D007582 4.3e-186 655.6 700 49.7
Prupe.4G060100 Prunus persica HOM05D005873 ORTHO05D007582 4.3e-186 655.6 699 49.4
Sabra04G0036300 Salix brachista HOM05D005873 ORTHO05D007582 4.3e-186 655.6 694 49.1
Cfa000601 Carpinus fangiana HOM05D005873 ORTHO05D007582 7.3e-186 654.8 688 49.7
MD10G1281000 Malus domestica HOM05D005873 ORTHO05D007582 1.2e-185 654.1 700 49.9
arahy.Tifrunner.gnm1.ann1.6H0VZY Arachis hypogaea HOM05D005873 ORTHO05D007582 1.6e-185 653.7 689 49.5
FAN16G2124 Fragaria x ananassa HOM05D005873 ORTHO05D007582 2.8e-185 652.9 705 49.4
Migut.M01045 Erythranthe guttata HOM05D005873 ORTHO05D007582 4.7e-185 652.1 698 48.3
AUR62036593 Chenopodium quinoa HOM05D005873 ORTHO05D007582 6.8e-184 648.3 680 50.7
MSTRG.16147 Avicennia marina HOM05D005873 ORTHO05D007582 2.0e-183 646.7 701 47.8
MD05G1302300 Malus domestica HOM05D005873 ORTHO05D007582 2.6e-183 646.4 700 49.0
DCAR_028009 Daucus carota HOM05D005873 ORTHO05D007582 3.4e-183 646.0 694 48.8
Rhsim13G0191000 Rhododendron simsii HOM05D005873 ORTHO05D007582 7.6e-183 644.8 716 47.9
Lj1C1193T7 Lonicera japonica HOM05D005873 ORTHO05D007582 9.9e-183 644.4 696 48.9
MBI06_g25992_MAGBIO Magnolia biondii HOM05D005873 ORTHO05D007582 1.7e-182 643.7 708 48.2
RcHm_v2.0_Chr5g0010641 Rosa chinensis HOM05D005873 ORTHO05D007582 2.2e-182 643.3 699 48.8
MELO3C007214.2 Cucumis melo HOM05D005873 ORTHO05D007582 4.1e-181 639.0 736 47.0
Nitab4.5_0003937g0030 Nicotiana tabacum HOM05D005873 ORTHO05D007582 3.5e-180 636.0 718 48.2
Carub.0008s0205 Capsella rubella HOM05D005873 ORTHO05D007582 1.0e-179 634.4 656 49.5
QL05p046535 Quercus lobata HOM05D005873 ORTHO05D007582 7.3e-178 628.2 768 44.5
Ah.14g087180 Amaranthus hybridus HOM05D005873 ORTHO05D007582 1.6e-177 627.1 690 48.6
FAN25G0256 Fragaria x ananassa HOM05D005873 ORTHO05D007582 1.6e-177 627.1 717 47.6
EL10Ac8g20512 Beta vulgaris HOM05D005873 ORTHO05D007582 2.8e-177 626.3 656 50.2
Cc11_g13830 Coffea canephora HOM05D005873 ORTHO05D007582 1.3e-174 617.5 701 47.6
Nitab4.5_0000158g0030 Nicotiana tabacum HOM05D005873 ORTHO05D007582 3.8e-174 615.9 659 49.6
Hund21181 Selenicereus undatus HOM05D005873 ORTHO05D007582 2.8e-169 599.7 747 44.4
AUR62031177 Chenopodium quinoa HOM05D005873 ORTHO05D007582 5.8e-167 592.0 699 46.4
Psat7g197320 Pisum sativum HOM05D005873 ORTHO05D007582 1.5e-162 577.4 691 46.9
Atru.chr10.1680 Acer truncatum HOM05D005873 ORTHO05D007582 2.6e-159 566.6 586 50.7
Sc17g0005780 Simmondsia chinensis HOM05D005873 ORTHO05D007582 1.9e-157 560.5 592 49.7
CBR_g39927 Chara braunii HOM05D005873 ORTHO05D007582 5.6e-154 548.9 721 43.1
SGA_v2.0_scaffold1G00037 Striga asiatica HOM05D005873 ORTHO05D007582 9.3e-149 531.6 691 42.8
Manes.17G054900 Manihot esculenta HOM05D005873 ORTHO05D007582 5.3e-144 515.8 536 50.7
CBR_g50802 Chara braunii HOM05D005873 ORTHO05D007582 2.9e-142 510.0 686 43.1
Dinv40666 Davidia involucrata HOM05D005873 ORTHO05D007582 1.8e-139 500.7 554 47.5
PRCOL_00005698 Prasinoderma coloniale HOM05D005873 ORTHO05D007582 3.7e-137 493.0 746 40.9
vmacro01547 Vaccinium macrocarpon HOM05D005873 ORTHO05D007582 1.8e-136 490.7 706 40.2
Cpa.g.sc7.54 Carica papaya HOM05D005873 ORTHO05D007582 5.0e-134 482.6 516 50.0
Mapoly0015s0071 Marchantia polymorpha HOM05D005873 ORTHO05D007582 4.7e-132 476.1 493 49.5
Os01g0614900 Oryza sativa ssp. japonica HOM05D005873 ORTHO05D007582 2.9e-126 456.8 658 39.4
MCO13G516 Micromonas commoda HOM05D005873 ORTHO05D007582 1.3e-121 441.4 742 39.5
Cfa025052 Carpinus fangiana HOM05D005873 ORTHO05D007582 3.7e-121 439.9 728 37.9
Cre03.g165215 Chlamydomonas reinhardtii HOM05D005873 ORTHO05D007582 8.0e-116 422.2 808 35.5
CSS0029481 Camellia sinensis var. sinensis HOM05D005873 ORTHO05D007582 1.2e-114 418.3 722 36.8
Eucgr.B01507 Eucalyptus grandis HOM05D005873 ORTHO05D007582 7.7e-111 405.6 454 48.2
Haze_26854 Corylus avellana HOM05D005873 ORTHO05D007582 1.1e-109 401.7 688 35.0
Haze_06243 Corylus avellana HOM05D005873 ORTHO05D007582 1.9e-93 347.8 375 48.5
CDE08G0418 Ceratophyllum demersum HOM05D005873 ORTHO05D007582 5.1e-78 296.6 303 53.1
Zm00001eb358160 Zea mays HOM05D005873 ORTHO05D007582 4.3e-77 293.5 346 46.2
Actinidia16800 Actinidia chinensis HOM05D005873 ORTHO05D007582 3.4e-66 257.3 328 44.5
SHI28554 Sapria himalayana HOM05D005873 ORTHO05D007582 8.7e-54 216.1 264 44.7
unitig_0.g713 Utricularia gibba HOM05D005873 ORTHO05D007582 2.1e-47 194.9 177 54.2
CDE08G0836 Ceratophyllum demersum HOM05D005873 ORTHO05D007582 4.6e-47 193.7 208 45.7
CDE02G2814 Ceratophyllum demersum HOM05D005873 ORTHO05D007582 2.8e-36 157.9 165 46.7
TPR.G23454 Trifolium pratense HOM05D001972 ORTHO05D002555 3.1e-27 127.9 128 53.1
SHI28555 Sapria himalayana HOM05D005873 ORTHO05D007582 3.0e-22 111.3 95 63.2
SHI28562 Sapria himalayana HOM05D005873 ORTHO05D007582 1.1e-21 109.4 114 44.7
Haze_06244 Corylus avellana HOM05D005873 ORTHO05D007582 9.7e-21 106.3 87 51.7
Psat0s133g0080 Pisum sativum HOM05D005873 ORTHO05D007582 7.2e-16 90.1 111 47.7
SHI28558 Sapria himalayana HOM05D005873 ORTHO05D050808 1.6e-15 89.0 81 51.9
Potri.011G065402 Populus trichocarpa HOM05D005873 ORTHO05D007582 6.3e-12 77.0 72 56.9
Sabra11G0047200 Salix brachista HOM05D005873 ORTHO05D007582 1.8e-11 75.5 61 50.8
Lsat_1_v5_gn_9_10320 Lactuca sativa HOM05D001670 ORTHO05D002980 1.1e-08 66.2 79 41.8
unitig_61.g26342 Utricularia gibba HOM05D004980 ORTHO05D006505 4.2e-08 64.3 212 29.2
Lsat_1_v5_gn_4_5981 Lactuca sativa HOM05D005873 ORTHO05D002980 3.6e-07 61.2 57 49.1
ClCG10G005220 Citrullus lanatus HOM05D004980 ORTHO05D006505 4.7e-07 60.8 236 28.4
MELO3C014186.2 Cucumis melo HOM05D004980 ORTHO05D006505 6.1e-07 60.5 236 28.0
CsaV3_3G004900 Cucumis sativus L. HOM05D004980 ORTHO05D006505 1.8e-06 58.9 236 26.7
SalBow3G0070 Salvia bowleyana HOM05D004980 ORTHO05D006505 1.8e-06 58.9 225 26.2
Actinidia32274 Actinidia chinensis HOM05D004980 ORTHO05D006505 2.3e-06 58.5 210 26.7
CDE02G3733 Ceratophyllum demersum HOM05D004980 ORTHO05D006505 2.3e-06 58.5 182 27.5
Ca_06343_v3 Cicer arietinum L. HOM05D004980 ORTHO05D006505 2.3e-06 58.5 180 26.1
Lsat_1_v5_gn_1_96960 Lactuca sativa HOM05D001670 ORTHO05D002980 2.3e-06 58.5 86 38.4
Medtr5g093580 Medicago truncatula HOM05D004980 ORTHO05D006505 2.3e-06 58.5 180 27.2
Sabra16G0233900 Salix brachista HOM05D004980 ORTHO05D006505 2.3e-06 58.5 210 26.7
TPR.G4803 Trifolium pratense HOM05D004980 ORTHO05D006505 3.0e-06 58.2 180 26.7
Rhsim06G0222400 Rhododendron simsii HOM05D004980 ORTHO05D006505 3.9e-06 57.8 210 28.1
Dinv40789 Davidia involucrata HOM05D004980 ORTHO05D006505 5.2e-06 57.4 210 26.7
CAN.G337.68 Capsicum annuum HOM05D004980 ORTHO05D006505 6.7e-06 57.0 223 26.9
CARHR268470 Cardamine hirsuta HOM05D004980 ORTHO05D006505 6.7e-06 57.0 180 26.7
ECA246G3869 Erigeron canadensis HOM05D004980 ORTHO05D006505 6.7e-06 57.0 217 25.8
Lju1319A3G37 Lonicera japonica HOM05D004980 ORTHO05D006505 6.7e-06 57.0 215 27.4
Peaxi162Scf00235g00521 Petunia axillaris HOM05D004980 ORTHO05D006505 8.8e-06 56.6 210 27.6
Potri.001G355800 Populus trichocarpa HOM05D004980 ORTHO05D006505 8.8e-06 56.6 210 26.7


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