Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO367G0472 Selaginella moellendorffii HOM05D006308 ORTHO05D007820 5.5e-100 367.9 216 100.0
Lalb_Chr20g0108751 Lupinus albus HOM05D006308 ORTHO05D007820 1.5e-41 173.7 160 56.9
GSVIVG01020411001 Vitis vinifera HOM05D006308 ORTHO05D007820 9.9e-41 171.0 160 53.8
ATR0605G149 Amborella trichopoda HOM05D006308 ORTHO05D007820 1.3e-40 170.6 156 55.8
Ca_03675_v3 Cicer arietinum L. HOM05D006308 ORTHO05D007820 2.2e-40 169.9 156 57.1
Eucgr.F01457 Eucalyptus grandis HOM05D006308 ORTHO05D007820 2.9e-40 169.5 164 53.7
Glyma.08G172200 Glycine max HOM05D006308 ORTHO05D007820 3.8e-40 169.1 159 57.2
Mapoly0031s0088 Marchantia polymorpha HOM05D006308 ORTHO05D007820 3.8e-40 169.1 165 53.9
Glyma.15G255800 Glycine max HOM05D006308 ORTHO05D007820 4.9e-40 168.7 159 57.2
MD10G1202500 Malus domestica HOM05D006308 ORTHO05D007820 6.4e-40 168.3 162 54.9
arahy.Tifrunner.gnm1.ann1.1EF43V Arachis hypogaea HOM05D006308 ORTHO05D007820 1.9e-39 166.8 161 54.7
Gohir.A04G049000 Gossypium hirsutum HOM05D006308 ORTHO05D007820 2.4e-39 166.4 150 56.0
PSO170G1595 Papaver somniferum HOM05D006308 ORTHO05D007820 2.4e-39 166.4 156 53.8
Gohir.D05G331300 Gossypium hirsutum HOM05D006308 ORTHO05D007820 3.2e-39 166.0 150 55.3
Gorai.009G355200 Gossypium raimondii HOM05D006308 ORTHO05D007820 3.2e-39 166.0 150 55.3
MBI04_g08705_MAGBIO Magnolia biondii HOM05D006308 ORTHO05D007820 3.2e-39 166.0 169 53.8
THA.LOC104822752 Tarenaya hassleriana HOM05D006308 ORTHO05D007820 3.2e-39 166.0 151 53.6
TPR.G9745 Trifolium pratense HOM05D006308 ORTHO05D007820 3.2e-39 166.0 161 55.3
Psat1g011160 Pisum sativum HOM05D006308 ORTHO05D007820 4.2e-39 165.6 160 53.1
PSO017G0504 Papaver somniferum HOM05D006308 ORTHO05D007820 5.4e-39 165.2 155 53.5
Pp3c9_2790 Physcomitrium patens HOM05D006308 ORTHO05D007820 5.4e-39 165.2 163 49.7
Nn6g31547 Nelumbo nucifera HOM05D006308 ORTHO05D007820 7.1e-39 164.9 169 53.3
Thecc.07G152500 Theobroma cacao HOM05D006308 ORTHO05D007820 7.1e-39 164.9 150 54.7
Ah.16g106540 Amaranthus hybridus HOM05D006308 ORTHO05D007820 9.3e-39 164.5 163 54.0
CSS0031885 Camellia sinensis var. sinensis HOM05D006308 ORTHO05D007820 9.3e-39 164.5 163 52.8
CSS0041769 Camellia sinensis var. sinensis HOM05D006308 ORTHO05D007820 9.3e-39 164.5 163 52.8
CANSAT80G1356 Cannabis sativa HOM05D006308 ORTHO05D007820 9.3e-39 164.5 154 53.2
CAN.G943.39 Capsicum annuum HOM05D006308 ORTHO05D007820 9.3e-39 164.5 160 54.4
AUR62043126 Chenopodium quinoa HOM05D006308 ORTHO05D007820 9.3e-39 164.5 159 52.8
Lj1A905G40 Lonicera japonica HOM05D006308 ORTHO05D007820 9.3e-39 164.5 161 52.8
Ciclev10021874m.g Citrus clementina HOM05D006308 ORTHO05D007820 1.2e-38 164.1 163 52.8
EL10Ac2g03321 Beta vulgaris HOM05D006308 ORTHO05D007820 1.6e-38 163.7 161 52.8
CiPaw.12G004900 Carya illinoinensis HOM05D006308 ORTHO05D007820 2.1e-38 163.3 164 51.2
CDE06G0902 Ceratophyllum demersum HOM05D006308 ORTHO05D007820 2.1e-38 163.3 156 53.8
FvH4_3g15760 Fragaria vesca HOM05D006308 ORTHO05D007820 2.1e-38 163.3 161 52.8
FAN11G0128 Fragaria x ananassa HOM05D006308 ORTHO05D007820 2.1e-38 163.3 161 52.8
FAN21G3038 Fragaria x ananassa HOM05D006308 ORTHO05D007820 2.1e-38 163.3 161 52.8
Manes.14G016400 Manihot esculenta HOM05D006308 ORTHO05D007820 2.1e-38 163.3 156 51.3
Medtr2g069470 Medicago truncatula HOM05D006308 ORTHO05D007820 2.1e-38 163.3 161 54.0
RcHm_v2.0_Chr5g0026561 Rosa chinensis HOM05D006308 ORTHO05D007820 2.1e-38 163.3 161 54.0
Phvul.005G057100 Phaseolus vulgaris HOM05D006308 ORTHO05D007820 2.7e-38 162.9 159 54.1
Atru.chr2.1759 Acer truncatum HOM05D006308 ORTHO05D007820 3.5e-38 162.5 150 54.7
COL.COLO4_07328 Corchorus olitorius HOM05D006308 ORTHO05D007820 3.5e-38 162.5 157 53.5
FAN16G0301 Fragaria x ananassa HOM05D006308 ORTHO05D007820 3.5e-38 162.5 161 52.8
QL08p064492 Quercus lobata HOM05D006308 ORTHO05D007820 3.5e-38 162.5 163 51.5
SEGI_12516 Sequoiadendron giganteum HOM05D006308 ORTHO05D007820 3.5e-38 162.5 156 53.8
Lj3g0010937 Lotus japonicus HOM05D006308 ORTHO05D007820 4.6e-38 162.2 159 53.5
CDE08G1673 Ceratophyllum demersum HOM05D006308 ORTHO05D007820 6.0e-38 161.8 171 50.9
Aa31LG8G150 Aethionema arabicum HOM05D006308 ORTHO05D007820 1.0e-37 161.0 168 51.2
ClCG07G010660 Citrullus lanatus HOM05D006308 ORTHO05D007820 1.3e-37 160.6 154 52.6
HanXRQChr10g0305791 Helianthus annuus HOM05D006308 ORTHO05D007820 1.3e-37 160.6 154 54.5
Hma1.2p1_0334F.1_g128750 Hydrangea macrophylla HOM05D006308 ORTHO05D007820 1.3e-37 160.6 156 53.2
Nitab4.5_0001080g0030 Nicotiana tabacum HOM05D004008 ORTHO05D005383 1.3e-37 160.6 161 52.2
Sabra16G0310800 Salix brachista HOM05D006308 ORTHO05D007820 1.3e-37 160.6 160 52.5
Hund12461 Selenicereus undatus HOM05D006308 ORTHO05D007820 1.3e-37 160.6 149 53.7
MELO3C016177.2 Cucumis melo HOM05D006308 ORTHO05D007820 1.7e-37 160.2 154 52.6
CsaV3_4G007640 Cucumis sativus L. HOM05D006308 ORTHO05D007820 1.7e-37 160.2 154 51.9
Migut.M01556 Erythranthe guttata HOM05D006308 ORTHO05D007820 2.3e-37 159.8 165 53.3
FAN25G0513 Fragaria x ananassa HOM05D006308 ORTHO05D007820 2.3e-37 159.8 161 52.2
Solyc07g066460.3 Solanum lycopersicum HOM05D006308 ORTHO05D007820 2.3e-37 159.8 163 50.9
Sopen07g034640 Solanum pennellii HOM05D006308 ORTHO05D007820 2.3e-37 159.8 163 50.9
PGSC0003DMG400022127 Solanum tuberosum HOM05D006308 ORTHO05D007820 2.3e-37 159.8 163 50.9
TWI39G0290 Tripterygium wilfordii HOM05D006308 ORTHO05D007820 2.3e-37 159.8 153 53.6
Duzib213G0994 Durio zibethinus HOM05D006308 ORTHO05D007820 3.0e-37 159.5 157 52.9
Sed0010671 Sechium edule HOM05D006308 ORTHO05D007820 3.0e-37 159.5 154 52.6
MSTRG.7060 Avicennia marina HOM05D006308 ORTHO05D007820 3.9e-37 159.1 160 53.8
Lsat_1_v5_gn_5_125241 Lactuca sativa HOM05D006308 ORTHO05D007820 3.9e-37 159.1 156 51.9
Peaxi162Scf00452g00832 Petunia axillaris HOM05D006308 ORTHO05D007820 3.9e-37 159.1 168 50.6
SGA_v2.0_scaffold186G40217 Striga asiatica HOM05D006308 ORTHO05D007820 3.9e-37 159.1 173 50.3
Aqoxy5G00928 Aquilegia oxysepala HOM05D006308 ORTHO05D007820 5.1e-37 158.7 159 53.5
vmacro11665 Vaccinium macrocarpon HOM05D006308 ORTHO05D007820 6.6e-37 158.3 149 53.7
BraA05t22456Z Brassica rapa HOM05D006308 ORTHO05D007820 8.7e-37 157.9 159 51.6
Potri.001G458600 Populus trichocarpa HOM05D006308 ORTHO05D007820 8.7e-37 157.9 159 50.3
Sp3g11070 Schrenkiella parvula HOM05D006308 ORTHO05D007820 8.7e-37 157.9 158 52.5
Sc06g0001530 Simmondsia chinensis HOM05D006308 ORTHO05D007820 1.1e-36 157.5 163 50.3
unitig_46.g18521 Utricularia gibba HOM05D006308 ORTHO05D007820 1.1e-36 157.5 159 50.9
Potri.011G142900 Populus trichocarpa HOM05D006308 ORTHO05D007820 1.9e-36 156.8 154 50.6
Nitab4.5_0001749g0010 Nicotiana tabacum HOM05D004008 ORTHO05D005383 4.3e-36 155.6 166 50.6
Thhalv10021431m.g Eutrema salsugineum HOM05D006308 ORTHO05D007820 5.6e-36 155.2 159 52.8
A05p36560 Brassica napus HOM05D006308 ORTHO05D007820 7.3e-36 154.8 159 50.3
Rhsim06G0239000 Rhododendron simsii HOM05D006308 ORTHO05D007820 7.3e-36 154.8 154 50.6
SalBow8G4544 Salvia bowleyana HOM05D006308 ORTHO05D007820 9.6e-36 154.5 160 53.1
AagrBONN_evm.TU.Sc2ySwM_228.3592 Anthoceros agrestis HOM05D006308 ORTHO05D007820 1.3e-35 154.1 160 50.6
AL3G24610 Arabidopsis lyrata HOM05D006308 ORTHO05D007820 1.3e-35 154.1 166 49.4
AT3G12930 Arabidopsis thaliana HOM05D006308 ORTHO05D007820 1.6e-35 153.7 162 49.4
BolC5t34167H Brassica oleracea HOM05D006308 ORTHO05D007820 1.6e-35 153.7 159 49.7
Carub.0005s0924 Capsella rubella HOM05D006308 ORTHO05D007820 1.6e-35 153.7 162 49.4
CARHR087450 Cardamine hirsuta HOM05D006308 ORTHO05D007820 1.6e-35 153.7 162 48.8
BcaC09g48280 Brassica carinata HOM05D006308 ORTHO05D007820 3.6e-35 152.5 166 49.4
ECA234G3728 Erigeron canadensis HOM05D006308 ORTHO05D007820 3.6e-35 152.5 158 51.3
PGR083G0385 Punica granatum HOM05D006308 ORTHO05D007820 3.6e-35 152.5 148 52.7
Cc05_g16080 Coffea canephora HOM05D006308 ORTHO05D007820 4.8e-35 152.1 164 49.4
A01p40570 Brassica napus HOM05D006308 ORTHO05D007820 8.1e-35 151.4 166 48.8
C01p52210 Brassica napus HOM05D006308 ORTHO05D007820 8.1e-35 151.4 166 48.8
BolC1t05161H Brassica oleracea HOM05D006308 ORTHO05D007820 8.1e-35 151.4 166 48.8
Sed0016869 Sechium edule HOM05D006308 ORTHO05D007820 8.1e-35 151.4 151 52.3
Prupe.4G139700 Prunus persica HOM05D006308 ORTHO05D007820 1.1e-34 151.0 168 49.4
arahy.Tifrunner.gnm1.ann1.HXV25C Arachis hypogaea HOM05D006308 ORTHO05D007820 2.4e-34 149.8 191 44.5
BcaC05g29223 Brassica carinata HOM05D006308 ORTHO05D007820 3.1e-34 149.4 149 50.3
HPP92_015477 Vanilla planifolia HOM05D006308 ORTHO05D007820 5.3e-34 148.7 159 50.3
C05p54980 Brassica napus HOM05D006308 ORTHO05D007820 9.0e-34 147.9 179 44.1
BraA01t04092Z Brassica rapa HOM05D006308 ORTHO05D007820 1.2e-33 147.5 166 48.2
Haze_08539 Corylus avellana HOM05D006308 ORTHO05D007820 3.8e-32 142.5 115 58.3
Oeu051665.1 Olea europaea HOM05D006308 ORTHO05D007820 6.4e-32 141.7 124 54.0
DCAR_016822 Daucus carota HOM05D006308 ORTHO05D007820 1.1e-31 141.0 159 46.5
Os09g0493600 Oryza sativa ssp. japonica HOM05D006308 ORTHO05D007820 1.9e-31 140.2 147 49.0
Sabra11G0127800 Salix brachista HOM05D006308 ORTHO05D007820 4.2e-31 139.0 193 40.4
BcaB06g25499 Brassica carinata HOM05D006308 ORTHO05D007820 1.3e-27 127.5 208 37.5
Manes.06G172000 Manihot esculenta HOM05D006308 ORTHO05D007820 2.6e-25 119.8 136 47.1
TAR381G0490 Trochodendron aralioides HOM05D006308 ORTHO05D007820 1.4e-23 114.0 124 48.4
VMungo1080G0665 Vigna mungo HOM05D006308 ORTHO05D007820 2.4e-23 113.2 119 48.7
Dinv42509 Davidia involucrata HOM05D006308 ORTHO05D007820 5.5e-23 112.1 121 47.9
Actinidia07352 Actinidia chinensis HOM05D006308 ORTHO05D007820 3.5e-22 109.4 86 57.0
Actinidia12793 Actinidia chinensis HOM05D006308 ORTHO05D007820 1.8e-21 107.1 156 42.3
Nn3g19990 Nelumbo nucifera HOM05D006308 ORTHO05D007820 5.6e-20 102.1 138 47.1
Nn3g19991 Nelumbo nucifera HOM05D006308 ORTHO05D007820 5.6e-20 102.1 138 47.1
Pp3c15_7010 Physcomitrium patens HOM05D006308 ORTHO05D007820 1.1e-18 97.8 145 36.6
MCO04G467 Micromonas commoda HOM05D006308 ORTHO05D007820 6.9e-18 95.1 140 37.9
Cre03.g205600 Chlamydomonas reinhardtii HOM05D006308 ORTHO05D007820 9.0e-18 94.7 122 41.0
PRCOL_00002538 Prasinoderma coloniale HOM05D006308 ORTHO05D007820 2.5e-15 86.7 124 39.5
CAN.G337.145 Capsicum annuum HOM05D006308 ORTHO05D007820 2.7e-14 83.2 109 40.4
CBR_g48397 Chara braunii HOM05D006308 ORTHO05D007820 7.4e-12 75.1 82 47.6
Nn3g18400 Nelumbo nucifera HOM05D006308 ORTHO05D007820 8.2e-11 71.6 86 47.7
AUR62039167 Chenopodium quinoa HOM05D007854 ORTHO05D138328 1.7e-08 63.9 53 58.5
A01p40580 Brassica napus HOM05D006308 ORTHO05D007820 7.9e-06 55.1 76 44.7


User provided reference genes

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