Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO356G0182 Selaginella moellendorffii HOM05D004159 ORTHO05D005858 0.0e+00 1196.8 618 100.0
AagrBONN_evm.TU.Sc2ySwM_362.1908 Anthoceros agrestis HOM05D004159 ORTHO05D005858 1.6e-192 676.8 614 59.3
SEGI_02382 Sequoiadendron giganteum HOM05D004159 ORTHO05D005858 3.0e-191 672.5 587 61.5
Mapoly0138s0023 Marchantia polymorpha HOM05D004159 ORTHO05D005858 2.1e-189 666.4 621 58.0
Nn3g16747 Nelumbo nucifera HOM05D004159 ORTHO05D005858 1.5e-182 643.7 596 58.2
TAR371G0318 Trochodendron aralioides HOM05D004159 ORTHO05D005858 1.8e-180 636.7 593 58.7
MBI16_g23841_MAGBIO Magnolia biondii HOM05D004159 ORTHO05D005858 1.3e-178 630.6 605 56.2
ATR1132G032 Amborella trichopoda HOM05D004159 ORTHO05D005858 3.8e-178 629.0 593 56.8
Pp3c3_23250 Physcomitrium patens HOM05D004159 ORTHO05D005858 3.8e-178 629.0 613 56.3
TAR629G3285 Trochodendron aralioides HOM05D004159 ORTHO05D005858 6.5e-178 628.2 588 57.1
Rhsim10G0017800 Rhododendron simsii HOM05D004159 ORTHO05D005858 1.4e-175 620.5 597 55.6
PGR142G2553 Punica granatum HOM05D004159 ORTHO05D005858 8.8e-175 617.8 603 55.2
Potri.004G121400 Populus trichocarpa HOM05D004159 ORTHO05D005858 3.3e-174 615.9 609 54.7
Os03g0699200 Oryza sativa ssp. japonica HOM05D004159 ORTHO05D005858 7.4e-174 614.8 598 54.3
Actinidia09406 Actinidia chinensis HOM05D004159 ORTHO05D005858 1.3e-173 614.0 590 54.4
Peaxi162Scf00700g00427 Petunia axillaris HOM05D004159 ORTHO05D005858 1.3e-173 614.0 593 55.3
CSS0048893 Camellia sinensis var. sinensis HOM05D004159 ORTHO05D005858 1.7e-173 613.6 590 54.9
Zm00001eb053960 Zea mays HOM05D004159 ORTHO05D005858 2.2e-173 613.2 612 54.2
Hma1.2p1_0078F.1_g040070 Hydrangea macrophylla HOM05D004159 ORTHO05D005858 1.4e-172 610.5 593 54.8
Solyc07g047670.3 Solanum lycopersicum HOM05D004159 ORTHO05D005858 5.3e-172 608.6 601 54.7
MSTRG.20029 Avicennia marina HOM05D004159 ORTHO05D005858 9.1e-172 607.8 587 54.3
Eucgr.I01748 Eucalyptus grandis HOM05D004159 ORTHO05D005858 2.0e-171 606.7 592 53.9
Cc07_g01750 Coffea canephora HOM05D004159 ORTHO05D005858 4.5e-171 605.5 596 54.0
CDE07G0971 Ceratophyllum demersum HOM05D004159 ORTHO05D005858 5.9e-171 605.1 597 54.3
GSVIVG01032412001 Vitis vinifera HOM05D004159 ORTHO05D005858 1.0e-170 604.4 596 54.0
Sabra04G0067000 Salix brachista HOM05D004159 ORTHO05D005858 2.2e-170 603.2 593 54.0
PGSC0003DMG400006122 Solanum tuberosum HOM05D004159 ORTHO05D005858 2.2e-170 603.2 616 53.9
TWI56G0312 Tripterygium wilfordii HOM05D004159 ORTHO05D005858 2.9e-170 602.8 598 54.3
BcaB01g05107 Brassica carinata HOM05D004159 ORTHO05D005858 5.0e-170 602.1 600 54.2
CiPaw.03G043300 Carya illinoinensis HOM05D004159 ORTHO05D005858 2.5e-169 599.7 597 54.4
Sp6g29490 Schrenkiella parvula HOM05D004159 ORTHO05D005858 3.2e-169 599.4 587 54.9
CiPaw.04G028300 Carya illinoinensis HOM05D004159 ORTHO05D005858 7.2e-169 598.2 601 54.4
THA.LOC104824006 Tarenaya hassleriana HOM05D004159 ORTHO05D005858 9.4e-169 597.8 598 53.2
BolC3t13270H Brassica oleracea HOM05D004159 ORTHO05D005858 1.2e-168 597.4 601 54.1
CAN.G1819.1 Capsicum annuum HOM05D004159 ORTHO05D005858 1.2e-168 597.4 605 53.9
Sed0001839 Sechium edule HOM05D004159 ORTHO05D005858 2.1e-168 596.7 614 52.0
C03p07700 Brassica napus HOM05D004159 ORTHO05D005858 3.6e-168 595.9 601 54.1
Cpa.g.sc108.65 Carica papaya HOM05D004159 ORTHO05D005858 3.6e-168 595.9 608 52.8
HanXRQChr04g0114031 Helianthus annuus HOM05D004159 ORTHO05D005858 1.0e-167 594.3 599 52.4
SGA_v2.0_scaffold32G13248 Striga asiatica HOM05D004159 ORTHO05D005858 1.0e-167 594.3 593 53.1
Thhalv10013046m.g Eutrema salsugineum HOM05D004159 ORTHO05D005858 1.8e-167 593.6 589 53.5
Aqoxy5G03802 Aquilegia oxysepala HOM05D004159 ORTHO05D005858 3.9e-167 592.4 587 54.5
Gorai.001G264700 Gossypium raimondii HOM05D004159 ORTHO05D005858 3.9e-167 592.4 588 52.9
Lj7C599T6 Lonicera japonica HOM05D004159 ORTHO05D005858 3.9e-167 592.4 586 53.4
Sed0003581 Sechium edule HOM05D004159 ORTHO05D005858 3.9e-167 592.4 614 51.6
HanXRQChr14g0462651 Helianthus annuus HOM05D004159 ORTHO05D005858 5.1e-167 592.0 600 52.0
CARHR198790 Cardamine hirsuta HOM05D004159 ORTHO05D005858 6.7e-167 591.7 587 54.2
Gohir.D07G229600 Gossypium hirsutum HOM05D004159 ORTHO05D005858 6.7e-167 591.7 588 52.9
AT5G14520 Arabidopsis thaliana HOM05D004159 ORTHO05D005858 1.5e-166 590.5 593 53.3
Gohir.A07G222900 Gossypium hirsutum HOM05D004159 ORTHO05D005858 1.5e-166 590.5 595 52.8
vmacro05861 Vaccinium macrocarpon HOM05D004159 ORTHO05D005858 2.0e-166 590.1 631 52.5
Duzib264G0191 Durio zibethinus HOM05D004159 ORTHO05D005858 2.6e-166 589.7 603 52.1
Duzib187G0134 Durio zibethinus HOM05D004159 ORTHO05D005858 3.3e-166 589.3 595 52.4
PSO017G2175 Papaver somniferum HOM05D004159 ORTHO05D005858 3.3e-166 589.3 599 53.4
SalBow6G0855 Salvia bowleyana HOM05D004159 ORTHO05D005858 3.3e-166 589.3 586 53.6
A03p06670 Brassica napus HOM05D004159 ORTHO05D005858 5.7e-166 588.6 601 53.9
Migut.N01406 Erythranthe guttata HOM05D004159 ORTHO05D005858 5.7e-166 588.6 592 54.1
COL.COLO4_29105 Corchorus olitorius HOM05D004159 ORTHO05D005858 9.7e-166 587.8 593 53.0
CANSAT64G2890 Cannabis sativa HOM05D004159 ORTHO05D005858 1.7e-165 587.0 592 53.5
CBR_g38896 Chara braunii HOM05D004159 ORTHO05D005858 2.2e-165 586.6 633 53.1
Oeu048622.3 Olea europaea HOM05D004159 ORTHO05D005858 2.2e-165 586.6 582 52.4
Ciclev10014699m.g Citrus clementina HOM05D004159 ORTHO05D005858 3.7e-165 585.9 598 52.2
Nitab4.5_0006221g0020 Nicotiana tabacum HOM05D004159 ORTHO05D005858 3.7e-165 585.9 629 52.1
DCAR_021719 Daucus carota HOM05D004159 ORTHO05D005858 6.3e-165 585.1 595 52.1
THA.LOC104822401 Tarenaya hassleriana HOM05D004159 ORTHO05D005858 8.2e-165 584.7 591 53.1
BraA03t10001Z Brassica rapa HOM05D004159 ORTHO05D005858 1.4e-164 583.9 601 53.6
Lsat_1_v5_gn_2_51000 Lactuca sativa HOM05D004159 ORTHO05D005858 1.4e-164 583.9 611 51.6
Atru.chr6.2388 Acer truncatum HOM05D004159 ORTHO05D005858 3.1e-164 582.8 601 52.9
Migut.B00156 Erythranthe guttata HOM05D004159 ORTHO05D005858 3.1e-164 582.8 587 54.2
Haze_14736 Corylus avellana HOM05D004159 ORTHO05D005858 1.5e-163 580.5 594 51.9
Thecc.04G016700 Theobroma cacao HOM05D004159 ORTHO05D005858 1.5e-163 580.5 596 52.0
QL02p074797 Quercus lobata HOM05D004159 ORTHO05D005858 2.6e-163 579.7 607 51.2
ECA240G1354 Erigeron canadensis HOM05D004159 ORTHO05D005858 1.3e-162 577.4 604 51.7
Manes.17G112500 Manihot esculenta HOM05D004159 ORTHO05D005858 1.7e-162 577.0 596 52.9
AL6G25270 Arabidopsis lyrata HOM05D004159 ORTHO05D005858 2.9e-162 576.2 558 54.3
Nitab4.5_0003930g0060 Nicotiana tabacum HOM05D004159 ORTHO05D005858 8.5e-162 574.7 601 53.4
Cfa007372 Carpinus fangiana HOM05D004159 ORTHO05D005858 3.2e-161 572.8 595 51.8
Carub.0006s1270 Capsella rubella HOM05D004159 ORTHO05D005858 9.4e-161 571.2 555 54.4
Prupe.3G291100 Prunus persica HOM05D004159 ORTHO05D005858 1.6e-160 570.5 590 52.4
Medtr7g100040 Medicago truncatula HOM05D004159 ORTHO05D005858 3.6e-160 569.3 595 51.3
VMungo0720G1997 Vigna mungo HOM05D004159 ORTHO05D005858 6.1e-160 568.5 585 51.8
arahy.Tifrunner.gnm1.ann1.M4LD34 Arachis hypogaea HOM05D004159 ORTHO05D005858 1.1e-158 564.3 611 50.6
ClCG01G013750 Citrullus lanatus HOM05D004159 ORTHO05D005858 2.0e-158 563.5 610 50.0
Phvul.007G070900 Phaseolus vulgaris HOM05D004159 ORTHO05D005858 2.0e-158 563.5 588 50.9
Ah.09g231680 Amaranthus hybridus HOM05D004159 ORTHO05D005858 3.3e-158 562.8 595 51.6
Lj1g0017236 Lotus japonicus HOM05D004159 ORTHO05D005858 4.4e-158 562.4 590 51.0
LjContig00272g0012452 Lotus japonicus HOM05D004159 ORTHO05D005858 5.7e-158 562.0 590 51.2
Psat0s1782g0040 Pisum sativum HOM05D004159 ORTHO05D005858 1.3e-157 560.8 596 51.5
EL10Ac8g19455 Beta vulgaris HOM05D004159 ORTHO05D005858 1.1e-156 557.8 583 51.1
MD17G1027600 Malus domestica HOM05D004159 ORTHO05D005858 1.1e-156 557.8 593 51.3
Lalb_Chr06g0175751 Lupinus albus HOM05D004159 ORTHO05D005858 1.8e-156 557.0 588 49.1
unitig_21.g20810 Utricularia gibba HOM05D004159 ORTHO05D005858 2.4e-156 556.6 594 49.7
Lalb_Chr02g0160481 Lupinus albus HOM05D004159 ORTHO05D005858 1.2e-155 554.3 592 49.0
AUR62040778 Chenopodium quinoa HOM05D004159 ORTHO05D005858 2.6e-155 553.1 591 50.8
Aa31LG11G15290 Aethionema arabicum HOM05D004159 ORTHO05D005858 4.5e-155 552.4 599 50.9
Hund22314 Selenicereus undatus HOM05D004159 ORTHO05D005858 7.7e-155 551.6 582 48.8
CsaV3_1G014060 Cucumis sativus L. HOM05D004159 ORTHO05D005858 1.3e-154 550.8 616 50.2
Glyma.03G234900 Glycine max HOM05D004159 ORTHO05D005858 1.7e-154 550.4 596 49.8
Lsat_1_v5_gn_4_179560 Lactuca sativa HOM05D004159 ORTHO05D005858 1.7e-154 550.4 569 49.9
Dinv33444 Davidia involucrata HOM05D004159 ORTHO05D005858 3.8e-154 549.3 550 53.8
AUR62040779 Chenopodium quinoa HOM05D004159 ORTHO05D005858 8.5e-154 548.1 520 55.2
TPR.G1071 Trifolium pratense HOM05D004159 ORTHO05D005858 1.1e-153 547.7 594 50.5
Glyma.19G232500 Glycine max HOM05D004159 ORTHO05D005858 1.9e-153 547.0 590 49.8
Ca_26485_v3 Cicer arietinum L. HOM05D004159 ORTHO05D005858 2.5e-153 546.6 613 50.2
PSO764G0137 Papaver somniferum HOM05D004159 ORTHO05D005858 2.5e-153 546.6 586 51.7
MD09G1027600 Malus domestica HOM05D004159 ORTHO05D005858 8.0e-152 541.6 606 49.0
MELO3C004873.2 Cucumis melo HOM05D004159 ORTHO05D005858 1.8e-151 540.4 616 49.7
CDE06G0546 Ceratophyllum demersum HOM05D004159 ORTHO05D005858 9.7e-150 534.6 600 49.0
ClCG11G000220 Citrullus lanatus HOM05D004159 ORTHO05D005858 5.0e-146 522.3 588 48.8
Sopen07g024120 Solanum pennellii HOM05D004159 ORTHO05D005858 1.8e-143 513.8 526 53.2
PSO478G0945 Papaver somniferum HOM05D004159 ORTHO05D005858 8.8e-143 511.5 599 48.9
HPP92_005716 Vanilla planifolia HOM05D004159 ORTHO05D005858 2.6e-142 510.0 591 48.1
FvH4_3g26080 Fragaria vesca HOM05D004159 ORTHO05D005858 1.4e-140 504.2 614 46.9
FAN11G1291 Fragaria x ananassa HOM05D004159 ORTHO05D005858 1.4e-140 504.2 614 46.9
FAN25G3844 Fragaria x ananassa HOM05D004159 ORTHO05D005858 1.4e-140 504.2 614 47.1
RcHm_v2.0_Chr5g0047391 Rosa chinensis HOM05D004159 ORTHO05D005858 1.2e-139 501.1 610 47.0
Prupe.8G015200 Prunus persica HOM05D004159 ORTHO05D005858 1.0e-138 498.0 586 47.8
FAN16G1867 Fragaria x ananassa HOM05D004159 ORTHO05D005858 5.0e-138 495.7 614 46.7
Prupe.8G015700 Prunus persica HOM05D004159 ORTHO05D005858 5.0e-138 495.7 586 47.6
Cre16.g683793 Chlamydomonas reinhardtii HOM05D004159 ORTHO05D005858 6.6e-138 495.4 641 44.6
FAN21G3616 Fragaria x ananassa HOM05D004159 ORTHO05D005858 4.2e-137 492.7 614 46.1
AUR62029204 Chenopodium quinoa HOM05D004159 ORTHO05D005858 2.1e-136 490.3 590 46.9
Medtr8g010330 Medicago truncatula HOM05D004159 ORTHO05D005858 1.4e-135 487.6 558 47.7
MCO04G526 Micromonas commoda HOM05D004159 ORTHO05D005858 3.1e-132 476.5 452 53.1
Prupe.4G071200 Prunus persica HOM05D004159 ORTHO05D005858 5.6e-129 465.7 580 46.4
PRCOL_00002170 Prasinoderma coloniale HOM05D004159 ORTHO05D005858 1.1e-124 451.4 614 44.1
ECA248G2726 Erigeron canadensis HOM05D004159 ORTHO05D005858 6.0e-123 445.7 605 43.8
Nitab4.5_0008375g0010 Nicotiana tabacum HOM05D004159 ORTHO05D005858 1.3e-117 427.9 439 53.1
arahy.Tifrunner.gnm1.ann1.M9AKWN Arachis hypogaea HOM05D004159 ORTHO05D005858 7.3e-113 412.1 468 48.9
TPR.G27000 Trifolium pratense HOM05D004159 ORTHO05D005858 1.6e-99 367.9 507 41.6
Dinv35104 Davidia involucrata HOM05D004159 ORTHO05D005858 6.6e-90 335.9 390 49.2
Sc03g0007500 Simmondsia chinensis HOM05D004159 ORTHO05D005858 9.0e-87 325.5 318 54.4
Hma1.2p1_2964F.1_g330970 Hydrangea macrophylla HOM05D004159 ORTHO05D005858 3.2e-84 317.0 320 53.1
Haze_26879 Corylus avellana HOM05D004159 ORTHO05D005858 1.5e-81 308.1 608 36.2
Ca_22754_v3 Cicer arietinum L. HOM05D004159 ORTHO05D005858 2.1e-80 304.3 345 50.7
Cfa027221 Carpinus fangiana HOM05D004159 ORTHO05D006938 1.8e-74 284.6 645 35.0
Hma1.2p1_0999F.1_g246250 Hydrangea macrophylla HOM05D004159 ORTHO05D005858 4.5e-62 243.4 344 43.3
Zm00001eb053940 Zea mays HOM05D004159 ORTHO05D005858 2.9e-61 240.7 270 50.7
RcHm_v2.0_Chr5g0047861 Rosa chinensis HOM05D004159 ORTHO05D036595 7.7e-54 216.1 183 59.6
BcaB01g05108 Brassica carinata HOM05D004159 ORTHO05D005858 1.8e-50 204.9 224 51.8
Psat1g081880 Pisum sativum HOM05D004159 ORTHO05D019349 1.7e-48 198.4 153 60.1
Sc03g0007510 Simmondsia chinensis HOM05D004159 ORTHO05D005858 7.2e-44 183.0 165 55.8
Hma1.2p1_0999F.1_g246240 Hydrangea macrophylla HOM05D004159 ORTHO05D005858 5.7e-41 173.3 133 59.4
PSO675G5574 Papaver somniferum HOM05D004159 ORTHO05D302046 1.7e-37 161.8 386 33.9
Gohir.D06G181800 Gossypium hirsutum HOM05D004159 ORTHO05D021100 6.5e-29 133.3 107 56.1
MD10G1043900 Malus domestica HOM05D004159 ORTHO05D036595 3.6e-27 127.5 113 52.2
Gorai.013G041700 Gossypium raimondii HOM05D004159 ORTHO05D005858 1.4e-26 125.6 108 52.8
Gohir.D13G037150 Gossypium hirsutum HOM05D004159 ORTHO05D021100 1.8e-26 125.2 108 52.8
SEGI_01298 Sequoiadendron giganteum HOM05D004159 ORTHO05D021100 6.8e-26 123.2 67 88.1
Aa31sc84G60 Aethionema arabicum HOM05D004159 ORTHO05D007259 4.4e-17 94.0 208 31.2
RcHm_v2.0_Chr5g0047691 Rosa chinensis HOM05D004159 ORTHO05D036595 5.7e-17 93.6 82 54.9
Actinidia33332 Actinidia chinensis HOM05D004159 ORTHO05D002141 1.3e-16 92.4 67 61.2
Hma1.2p1_0078F.1_g040060 Hydrangea macrophylla HOM05D004159 ORTHO05D005858 1.1e-15 89.4 96 47.9
Hma1.2p1_0078F.1_g040075 Hydrangea macrophylla HOM05D004159 ORTHO05D005858 1.1e-15 89.4 96 47.9
HanXRQChr05g0138871 Helianthus annuus HOM05D004159 ORTHO05D005858 1.8e-15 88.6 144 40.3
Medtr6g022610 Medicago truncatula HOM05D004159 ORTHO05D005858 5.4e-15 87.0 122 45.1
Ca_31061_v3 Cicer arietinum L. HOM05D004159 ORTHO05D005858 1.3e-13 82.4 182 37.9
MD13G1107200 Malus domestica HOM05D004159 ORTHO05D021100 1.1e-12 79.3 62 58.1
Lj2g0001382 Lotus japonicus HOM05D004159 ORTHO05D235994 2.8e-11 74.7 55 60.0
Medtr6g022550 Medicago truncatula HOM05D004159 ORTHO05D005858 1.8e-10 72.0 60 53.3
Actinidia35769 Actinidia chinensis HOM05D004159 ORTHO05D021100 2.7e-06 58.2 91 42.9


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