Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO352G0087 Selaginella moellendorffii HOM05D006356 ORTHO05D007903 0.0e+00 2379.7 1213 100.0
Mapoly0015s0194 Marchantia polymorpha HOM05D006356 ORTHO05D007903 8.9e-256 887.9 1359 39.9
Potri.010G208400 Populus trichocarpa HOM05D006356 ORTHO05D007903 4.7e-241 839.0 1335 39.1
SEGI_26197 Sequoiadendron giganteum HOM05D006356 ORTHO05D007903 3.2e-237 826.2 1290 38.0
Potri.008G052400 Populus trichocarpa HOM05D006356 ORTHO05D007903 2.7e-236 823.2 1304 39.3
Sabra08G0037700 Salix brachista HOM05D006356 ORTHO05D007903 8.7e-235 818.1 1308 38.8
arahy.Tifrunner.gnm1.ann1.C821YF Arachis hypogaea HOM05D006356 ORTHO05D007903 1.1e-234 817.8 1326 38.4
AUR62040952 Chenopodium quinoa HOM05D006356 ORTHO05D007903 1.3e-233 814.3 1326 38.2
ClCG09G020060 Citrullus lanatus HOM05D006356 ORTHO05D007903 8.1e-233 811.6 1317 37.7
Haze_17035 Corylus avellana HOM05D006356 ORTHO05D007903 2.4e-232 810.1 1306 38.4
EL10Ac2g03426 Beta vulgaris HOM05D006356 ORTHO05D007903 5.3e-232 808.9 1307 38.3
TAR369G0783 Trochodendron aralioides HOM05D006356 ORTHO05D007903 6.9e-232 808.5 1309 38.3
Cfa001508 Carpinus fangiana HOM05D006356 ORTHO05D007903 1.5e-231 807.4 1301 38.4
Lalb_Chr21g0307391 Lupinus albus HOM05D006356 ORTHO05D007903 2.6e-231 806.6 1325 38.5
DCAR_027666 Daucus carota HOM05D006356 ORTHO05D007903 4.4e-231 805.8 1282 39.1
TPR.G13985 Trifolium pratense HOM05D006356 ORTHO05D007903 2.9e-230 803.1 1326 38.8
CSS0015977 Camellia sinensis var. sinensis HOM05D006356 ORTHO05D007903 3.8e-230 802.7 1312 37.7
CAN.G1013.4 Capsicum annuum HOM05D006356 ORTHO05D007903 3.8e-230 802.7 1300 38.5
PSO675G9381 Papaver somniferum HOM05D006356 ORTHO05D007903 4.9e-230 802.4 1310 38.2
MELO3C025450.2 Cucumis melo HOM05D006356 ORTHO05D007903 1.4e-229 800.8 1317 37.5
Medtr1g115300 Medicago truncatula HOM05D006356 ORTHO05D007903 2.4e-229 800.0 1322 38.9
HanXRQChr08g0220321 Helianthus annuus HOM05D006356 ORTHO05D007903 3.2e-229 799.7 1274 38.1
LjContig00357g0007551 Lotus japonicus HOM05D006356 ORTHO05D007903 3.2e-229 799.7 1323 38.0
Pp3c8_3890 Physcomitrium patens HOM05D006356 ORTHO05D007903 4.2e-229 799.3 1160 40.1
Glyma.10G289800 Glycine max HOM05D006356 ORTHO05D007903 5.4e-229 798.9 1320 38.5
Actinidia07718 Actinidia chinensis HOM05D006356 ORTHO05D007903 1.2e-228 797.7 1310 38.5
PGSC0003DMG400023520 Solanum tuberosum HOM05D006356 ORTHO05D007903 1.2e-228 797.7 1295 37.8
Gohir.D10G224900 Gossypium hirsutum HOM05D006356 ORTHO05D007903 2.1e-228 797.0 1332 37.3
PSO541G4186 Papaver somniferum HOM05D006356 ORTHO05D007903 6.0e-228 795.4 1314 37.4
Ah.16g107390 Amaranthus hybridus HOM05D006356 ORTHO05D007903 2.3e-227 793.5 1296 37.6
Solyc05g054630.4 Solanum lycopersicum HOM05D006356 ORTHO05D007903 2.3e-227 793.5 1303 37.6
MBI14_g24317_MAGBIO Magnolia biondii HOM05D006356 ORTHO05D007903 3.9e-227 792.7 1308 37.2
Rhsim09G0107200 Rhododendron simsii HOM05D006356 ORTHO05D007903 3.9e-227 792.7 1310 38.2
Hund20019 Selenicereus undatus HOM05D006356 ORTHO05D007903 5.1e-227 792.3 1250 39.5
Lsat_1_v5_gn_8_16481 Lactuca sativa HOM05D006356 ORTHO05D007903 6.6e-227 792.0 1267 38.5
Ciclev10030528m.g Citrus clementina HOM05D006356 ORTHO05D007903 1.5e-226 790.8 1305 38.1
Gorai.011G255900 Gossypium raimondii HOM05D006356 ORTHO05D007903 1.9e-226 790.4 1307 37.4
Cc02_g08190 Coffea canephora HOM05D006356 ORTHO05D007903 2.5e-226 790.0 1307 38.1
Gohir.A10G215900 Gossypium hirsutum HOM05D006356 ORTHO05D007903 2.5e-226 790.0 1253 38.4
Psat2g006960 Pisum sativum HOM05D006356 ORTHO05D007903 7.3e-226 788.5 1328 38.3
ECA233G4627 Erigeron canadensis HOM05D006356 ORTHO05D007903 9.6e-226 788.1 1275 38.0
QL08p059009 Quercus lobata HOM05D006356 ORTHO05D007903 9.6e-226 788.1 1316 37.9
FAN03G2412 Fragaria x ananassa HOM05D006356 ORTHO05D007903 2.8e-225 786.6 1302 37.3
FAN06G1346 Fragaria x ananassa HOM05D006356 ORTHO05D007903 2.8e-225 786.6 1302 37.1
AUR62038374 Chenopodium quinoa HOM05D006356 ORTHO05D007903 3.6e-225 786.2 1207 38.9
FAN01G2014 Fragaria x ananassa HOM05D006356 ORTHO05D007903 1.1e-224 784.6 1302 37.0
Peaxi162Scf00015g01616 Petunia axillaris HOM05D006356 ORTHO05D007903 1.8e-224 783.9 1326 37.7
BraA10t44524Z Brassica rapa HOM05D006356 ORTHO05D007903 3.1e-224 783.1 1298 37.9
FvH4_7g21920 Fragaria vesca HOM05D006356 ORTHO05D007903 4.0e-224 782.7 1302 37.0
Nitab4.5_0006342g0010 Nicotiana tabacum HOM05D006356 ORTHO05D007903 4.0e-224 782.7 1342 37.0
Ca_11290_v3 Cicer arietinum L. HOM05D006356 ORTHO05D007903 1.2e-223 781.2 1272 39.4
Sopen05g033110 Solanum pennellii HOM05D006356 ORTHO05D007903 1.2e-223 781.2 1245 38.5
Aqoxy4G02989 Aquilegia oxysepala HOM05D006356 ORTHO05D007903 1.5e-223 780.8 1318 37.3
Os07g0563700 Oryza sativa ssp. japonica HOM05D006356 ORTHO05D007903 1.5e-223 780.8 1327 37.5
PGR044G1537 Punica granatum HOM05D006356 ORTHO05D007903 1.5e-223 780.8 1315 37.6
A10p24610 Brassica napus HOM05D006356 ORTHO05D007903 2.6e-223 780.0 1299 38.0
Eucgr.J00045 Eucalyptus grandis HOM05D006356 ORTHO05D007903 2.6e-223 780.0 1319 37.3
FAN10G4053 Fragaria x ananassa HOM05D006356 ORTHO05D007903 3.4e-223 779.6 1302 36.9
Nitab4.5_0001831g0090 Nicotiana tabacum HOM05D006356 ORTHO05D007903 4.5e-223 779.2 1295 37.6
RcHm_v2.0_Chr1g0366221 Rosa chinensis HOM05D006356 ORTHO05D007903 4.5e-223 779.2 1299 37.3
Migut.H00419 Erythranthe guttata HOM05D006356 ORTHO05D007903 9.9e-223 778.1 1288 38.0
Atru.BG.253.p Acer truncatum HOM05D006356 ORTHO05D007903 2.2e-222 776.9 1239 38.5
AL6G24290 Arabidopsis lyrata HOM05D006356 ORTHO05D007903 4.9e-222 775.8 1300 37.6
Nn2g12928 Nelumbo nucifera HOM05D006356 ORTHO05D007903 8.4e-222 775.0 1316 37.1
vmacro07156 Vaccinium macrocarpon HOM05D006356 ORTHO05D007903 1.1e-221 774.6 1257 38.0
C09p63420 Brassica napus HOM05D006356 ORTHO05D007903 1.4e-221 774.2 1291 37.6
BolC9t59188H Brassica oleracea HOM05D006356 ORTHO05D007903 3.2e-221 773.1 1304 37.7
Zm00001eb082380 Zea mays HOM05D006356 ORTHO05D007903 3.2e-221 773.1 1311 36.8
Duzib106G0492 Durio zibethinus HOM05D006356 ORTHO05D007903 4.2e-221 772.7 1334 37.0
AT5G13680 Arabidopsis thaliana HOM05D006356 ORTHO05D007903 5.5e-221 772.3 1294 37.8
Prupe.2G231100 Prunus persica HOM05D006356 ORTHO05D007903 9.3e-221 771.5 1299 38.2
MD07G1193500 Malus domestica HOM05D006356 ORTHO05D007903 1.2e-220 771.2 1300 38.2
Thecc.10G046600 Theobroma cacao HOM05D006356 ORTHO05D007903 3.5e-220 769.6 1330 36.7
CANSAT56G2020 Cannabis sativa HOM05D006356 ORTHO05D007903 1.0e-219 768.1 1311 37.1
Sc20g0002610 Simmondsia chinensis HOM05D006356 ORTHO05D007903 5.1e-219 765.8 1305 37.5
VMungo0720G2582 Vigna mungo HOM05D006356 ORTHO05D007903 1.9e-218 763.8 1306 36.8
Lj8C87G2 Lonicera japonica HOM05D006356 ORTHO05D007903 3.3e-218 763.1 1293 37.3
FAN06G1693 Fragaria x ananassa HOM05D006356 ORTHO05D007903 4.3e-218 762.7 1221 37.6
TWI38G0752 Tripterygium wilfordii HOM05D006356 ORTHO05D007903 1.3e-217 761.1 1308 37.4
AagrBONN_evm.TU.Sc2ySwM_362.1673 Anthoceros agrestis HOM05D006356 ORTHO05D007903 1.6e-217 760.8 1141 40.6
SGA_v2.0_scaffold204G41568 Striga asiatica HOM05D006356 ORTHO05D007903 2.1e-217 760.4 1310 37.6
THA.LOC104799353 Tarenaya hassleriana HOM05D006356 ORTHO05D007903 4.0e-216 756.1 1299 37.1
Carub.0006s1184 Capsella rubella HOM05D006356 ORTHO05D007903 9.0e-216 755.0 1295 37.1
ATR0559G370 Amborella trichopoda HOM05D006356 ORTHO05D007903 1.0e-214 751.5 1311 35.8
Sp6g30340 Schrenkiella parvula HOM05D006356 ORTHO05D007903 3.8e-214 749.6 1297 36.5
MD01G1123800 Malus domestica HOM05D006356 ORTHO05D007903 8.4e-214 748.4 1304 37.0
Thhalv10012453m.g Eutrema salsugineum HOM05D006356 ORTHO05D007903 4.2e-213 746.1 1302 36.6
Aa31sc144G30 Aethionema arabicum HOM05D006356 ORTHO05D007903 1.9e-210 737.3 1327 36.8
Manes.07G113200 Manihot esculenta HOM05D006356 ORTHO05D007903 3.4e-207 726.5 1099 39.5
BcaC04g24267 Brassica carinata HOM05D006356 ORTHO05D007903 1.0e-206 724.9 1271 37.2
GSVIVG01016590001 Vitis vinifera HOM05D006356 ORTHO05D007903 2.5e-205 720.3 1241 36.4
HPP92_012583 Vanilla planifolia HOM05D006356 ORTHO05D007903 3.1e-200 703.4 1311 34.8
CsaV3_5G026400 Cucumis sativus L. HOM05D006356 ORTHO05D007903 2.0e-199 700.7 1086 38.2
CARHR199760 Cardamine hirsuta HOM05D006356 ORTHO05D007903 1.1e-197 694.9 1161 37.6
Atru.chr12.503 Acer truncatum HOM05D006356 ORTHO05D007903 1.4e-197 694.5 1091 38.2
Sed0005812 Sechium edule HOM05D006356 ORTHO05D007903 1.9e-197 694.1 1087 38.5
Phvul.007G011700 Phaseolus vulgaris HOM05D006356 ORTHO05D007903 1.8e-195 687.6 1099 38.4
Dinv31432 Davidia involucrata HOM05D006356 ORTHO05D007903 1.4e-192 677.9 1271 35.8
Oeu016021.3 Olea europaea HOM05D006356 ORTHO05D007903 2.2e-185 654.1 1211 35.3
COL.COLO4_14974 Corchorus olitorius HOM05D006356 ORTHO05D007903 2.3e-179 634.0 1259 34.6
CDE04G3644 Ceratophyllum demersum HOM05D006356 ORTHO05D007903 3.7e-177 626.7 1249 34.2
SEGI_10512 Sequoiadendron giganteum HOM05D006356 ORTHO05D007903 3.0e-163 580.5 772 42.2
CBR_g230 Chara braunii HOM05D006356 ORTHO05D007903 2.8e-161 573.9 1499 31.0
Hma1.2p1_0533F.1_g173660 Hydrangea macrophylla HOM05D006356 ORTHO05D007903 9.2e-160 568.9 798 41.5
Hma1.2p1_0533F.1_g173650 Hydrangea macrophylla HOM05D006356 ORTHO05D007903 4.0e-155 553.5 734 42.8
CiPaw.01G284000 Carya illinoinensis HOM05D006356 ORTHO05D007903 1.0e-142 512.3 951 35.3
Cpa.g.sc1.373 Carica papaya HOM05D006356 ORTHO05D007903 4.1e-128 463.8 922 33.7
unitig_736.g22670 Utricularia gibba HOM05D006356 ORTHO05D007903 6.7e-102 376.7 856 30.4
MCO05G525 Micromonas commoda HOM05D006356 ORTHO05D007903 6.3e-92 343.6 1431 26.1
unitig_736.g22669 Utricularia gibba HOM05D006356 ORTHO05D007903 3.6e-87 327.8 416 43.3
Cre08.g372500 Chlamydomonas reinhardtii HOM05D006356 ORTHO05D007903 7.7e-74 283.5 1534 24.3
TAR225G0003 Trochodendron aralioides HOM05D002467 ORTHO05D003907 6.5e-65 253.8 1212 25.3
Cpa.g.sc1.372 Carica papaya HOM05D006356 ORTHO05D007903 1.2e-61 243.0 324 42.0
arahy.Tifrunner.gnm1.ann1.1A0WRJ Arachis hypogaea HOM05D006356 ORTHO05D007903 2.2e-57 228.8 379 37.2
PRCOL_00001522 Prasinoderma coloniale HOM05D006356 ORTHO05D007903 2.5e-48 198.7 1212 24.7
Hma1.2p1_0529F.1_g173120 Hydrangea macrophylla HOM05D006356 ORTHO05D007903 7.3e-32 144.1 198 43.4
Hma1.2p1_0248F.1_g102020 Hydrangea macrophylla HOM05D006356 ORTHO05D007903 2.9e-28 132.1 136 50.0
Psat6g224200 Pisum sativum HOM05D006356 ORTHO05D007903 4.9e-28 131.3 138 52.2
Nn4g26017 Nelumbo nucifera HOM05D006356 ORTHO05D007903 9.2e-27 127.1 233 31.8
Psat0s4636g0040 Pisum sativum HOM05D006356 ORTHO05D007903 1.2e-26 126.7 128 54.7
Actinidia02967 Actinidia chinensis HOM05D006356 ORTHO05D007903 3.6e-23 115.2 268 34.3


User provided reference genes

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