Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO347G0658 Selaginella moellendorffii HOM05D005088 ORTHO05D006914 2.5e-110 402.1 203 100.0
Actinidia36135 Actinidia chinensis HOM05D005088 ORTHO05D006914 8.7e-47 191.0 171 59.1
Dinv22813 Davidia involucrata HOM05D005088 ORTHO05D006914 1.1e-46 190.7 171 57.9
Pp3c15_21890 Physcomitrium patens HOM05D005088 ORTHO05D006914 1.9e-46 189.9 177 56.5
SEGI_26999 Sequoiadendron giganteum HOM05D005088 ORTHO05D006914 1.9e-46 189.9 172 57.6
ATR1136G111 Amborella trichopoda HOM05D005088 ORTHO05D006914 1.6e-45 186.8 174 56.3
Manes.15G152700 Manihot esculenta HOM05D005088 ORTHO05D006914 2.8e-45 186.0 169 58.0
CSS0015220 Camellia sinensis var. sinensis HOM05D005088 ORTHO05D006914 3.6e-45 185.7 172 58.7
Mapoly0020s0128 Marchantia polymorpha HOM05D005088 ORTHO05D006914 1.4e-44 183.7 176 56.2
TAR371G0548 Trochodendron aralioides HOM05D005088 ORTHO05D006914 2.4e-44 183.0 171 57.3
ECA236G2300 Erigeron canadensis HOM05D005088 ORTHO05D006914 3.1e-44 182.6 171 56.7
HanXRQChr04g0122711 Helianthus annuus HOM05D005088 ORTHO05D006914 3.1e-44 182.6 171 57.3
PGR142G2056 Punica granatum HOM05D005088 ORTHO05D006914 5.3e-44 181.8 171 55.6
GSVIVG01008659001 Vitis vinifera HOM05D005088 ORTHO05D006914 1.5e-43 180.3 171 54.4
RhsimUnG0087300 Rhododendron simsii HOM05D005088 ORTHO05D006914 3.4e-43 179.1 171 57.3
RhsimUnG0006300 Rhododendron simsii HOM05D005088 ORTHO05D006914 9.9e-43 177.6 171 56.7
Oeu013966.1 Olea europaea HOM05D005088 ORTHO05D006914 1.7e-42 176.8 165 56.4
Migut.H00031 Erythranthe guttata HOM05D005088 ORTHO05D006914 2.2e-42 176.4 164 56.1
vmacro05886 Vaccinium macrocarpon HOM05D005088 ORTHO05D006914 2.2e-42 176.4 170 56.5
Lsat_1_v5_gn_7_9521 Lactuca sativa HOM05D005088 ORTHO05D006914 2.9e-42 176.0 168 55.4
CBR_g229 Chara braunii HOM05D005088 ORTHO05D006914 3.8e-42 175.6 178 53.4
TWI73G1260 Tripterygium wilfordii HOM05D005088 ORTHO05D006914 3.8e-42 175.6 171 55.0
TAR629G0436 Trochodendron aralioides HOM05D005088 ORTHO05D006914 3.8e-42 175.6 170 53.5
Nn2g12382 Nelumbo nucifera HOM05D005088 ORTHO05D006914 4.9e-42 175.3 172 52.9
SMO235G0038 Selaginella moellendorffii HOM05D005088 ORTHO05D006914 4.9e-42 175.3 206 57.3
TWI63G0383 Tripterygium wilfordii HOM05D005088 ORTHO05D006914 1.1e-41 174.1 171 54.4
Sopen01g054060 Solanum pennellii HOM05D005088 ORTHO05D006914 5.5e-41 171.8 169 54.4
CsaV3_5G026950 Cucumis sativus L. HOM05D005088 ORTHO05D006914 7.1e-41 171.4 171 54.4
Atru.chr6.2443 Acer truncatum HOM05D005088 ORTHO05D006914 1.2e-40 170.6 176 54.0
Solyc10g008130.3 Solanum lycopersicum HOM05D005088 ORTHO05D006914 1.6e-40 170.2 169 53.8
Sopen10g004000 Solanum pennellii HOM05D005088 ORTHO05D006914 1.6e-40 170.2 169 53.8
PGSC0003DMG400021851 Solanum tuberosum HOM05D005088 ORTHO05D006914 1.6e-40 170.2 169 53.8
Actinidia05972 Actinidia chinensis HOM05D005088 ORTHO05D006914 2.7e-40 169.5 165 56.4
Cre06.g264500 Chlamydomonas reinhardtii HOM05D005088 ORTHO05D006914 3.5e-40 169.1 126 67.5
Ciclev10015979m.g Citrus clementina HOM05D005088 ORTHO05D006914 4.6e-40 168.7 167 54.5
Sed0009164 Sechium edule HOM05D005088 ORTHO05D006914 6.0e-40 168.3 169 53.8
Nitab4.5_0006478g0030 Nicotiana tabacum HOM05D005088 ORTHO05D006914 7.9e-40 167.9 169 53.3
THA.LOC104820717 Tarenaya hassleriana HOM05D005088 ORTHO05D006914 7.9e-40 167.9 170 53.5
CDE02G1254 Ceratophyllum demersum HOM05D005088 ORTHO05D006914 1.0e-39 167.5 173 52.0
Cc00_g04470 Coffea canephora HOM05D005088 ORTHO05D006914 1.0e-39 167.5 118 67.8
CANSAT64G2170 Cannabis sativa HOM05D005088 ORTHO05D006914 1.3e-39 167.2 170 54.7
Gohir.A07G224400 Gossypium hirsutum HOM05D005088 ORTHO05D006914 1.8e-39 166.8 168 52.4
PGSC0003DMG400010550 Solanum tuberosum HOM05D005088 ORTHO05D006914 2.3e-39 166.4 169 52.7
Potri.001G341300 Populus trichocarpa HOM05D005088 ORTHO05D006914 3.9e-39 165.6 164 54.9
Thhalv10006186m.g Eutrema salsugineum HOM05D005088 ORTHO05D006914 5.1e-39 165.2 170 52.4
ClCG09G019430 Citrullus lanatus HOM05D005088 ORTHO05D006914 6.7e-39 164.9 169 52.7
Gohir.D07G231700 Gossypium hirsutum HOM05D005088 ORTHO05D006914 6.7e-39 164.9 170 51.2
Nitab4.5_0001562g0080 Nicotiana tabacum HOM05D005088 ORTHO05D006914 6.7e-39 164.9 168 52.4
Nitab4.5_0006683g0110 Nicotiana tabacum HOM05D005088 ORTHO05D006914 6.7e-39 164.9 167 52.7
Sabra16G0221300 Salix brachista HOM05D005088 ORTHO05D006914 6.7e-39 164.9 163 55.2
EL10Ac6g15396 Beta vulgaris HOM05D005088 ORTHO05D006914 1.1e-38 164.1 177 48.6
Duzib147G1185 Durio zibethinus HOM05D005088 ORTHO05D006914 1.1e-38 164.1 168 50.6
Ah.15g098720 Amaranthus hybridus HOM05D005088 ORTHO05D006914 1.9e-38 163.3 176 50.0
COL.COLO4_29189 Corchorus olitorius HOM05D005088 ORTHO05D006914 1.9e-38 163.3 170 51.2
Peaxi162Scf00420g00135 Petunia axillaris HOM05D005088 ORTHO05D006914 1.9e-38 163.3 169 51.5
Lj7A602T41 Lonicera japonica HOM05D005088 ORTHO05D006914 2.5e-38 162.9 118 66.1
Haze_14769 Corylus avellana HOM05D005088 ORTHO05D006914 3.3e-38 162.5 170 51.8
MELO3C021598.2 Cucumis melo HOM05D005088 ORTHO05D006914 3.3e-38 162.5 167 52.7
Nitab4.5_0001357g0120 Nicotiana tabacum HOM05D005088 ORTHO05D006914 4.3e-38 162.2 167 52.1
CARHR166630 Cardamine hirsuta HOM05D005088 ORTHO05D006914 5.6e-38 161.8 170 52.4
Cpa.g.sc130.68 Carica papaya HOM05D005088 ORTHO05D006914 5.6e-38 161.8 131 61.1
Glyma.05G115100 Glycine max HOM05D005088 ORTHO05D006914 5.6e-38 161.8 166 51.2
Gorai.001G266900 Gossypium raimondii HOM05D005088 ORTHO05D006914 5.6e-38 161.8 167 51.5
unitig_748.g6973 Utricularia gibba HOM05D005088 ORTHO05D006914 5.6e-38 161.8 162 51.9
Thecc.04G021300 Theobroma cacao HOM05D005088 ORTHO05D006914 9.6e-38 161.0 168 50.0
VMungo0464G1582 Vigna mungo HOM05D005088 ORTHO05D006914 9.6e-38 161.0 156 53.2
BcaC07g39962 Brassica carinata HOM05D005088 ORTHO05D006914 1.3e-37 160.6 170 50.6
BcaNung07365 Brassica carinata HOM05D005088 ORTHO05D006914 1.3e-37 160.6 170 50.6
Hma1.2p1_0587F.1_g183900 Hydrangea macrophylla HOM05D005088 ORTHO05D006914 1.3e-37 160.6 118 64.4
MD17G1021200 Malus domestica HOM05D005088 ORTHO05D006914 1.3e-37 160.6 162 51.9
Aa31LG2G11590 Aethionema arabicum HOM05D005088 ORTHO05D006914 2.1e-37 159.8 170 48.8
CANSAT64G1390 Cannabis sativa HOM05D005088 ORTHO05D006914 2.1e-37 159.8 170 52.4
Carub.0005s2328 Capsella rubella HOM05D005088 ORTHO05D006914 2.1e-37 159.8 170 50.0
Prupe.3G295300 Prunus persica HOM05D005088 ORTHO05D006914 2.1e-37 159.8 201 45.8
SalBow8G2200 Salvia bowleyana HOM05D005088 ORTHO05D006914 2.1e-37 159.8 164 51.8
BcaNung07083 Brassica carinata HOM05D005088 ORTHO05D006914 2.8e-37 159.5 170 50.0
PSO063G5784 Papaver somniferum HOM05D005088 ORTHO05D006914 2.8e-37 159.5 165 51.5
SalBow4G2808 Salvia bowleyana HOM05D005088 ORTHO05D006914 2.8e-37 159.5 164 51.8
Lalb_Chr06g0174471 Lupinus albus HOM05D005088 ORTHO05D006914 3.7e-37 159.1 166 51.2
Phvul.004G060300 Phaseolus vulgaris HOM05D005088 ORTHO05D006914 3.7e-37 159.1 162 50.6
AL5G37860 Arabidopsis lyrata HOM05D005088 ORTHO05D006914 4.8e-37 158.7 170 50.0
PSO754G0075 Papaver somniferum HOM05D005088 ORTHO05D006914 4.8e-37 158.7 165 52.1
Sc14g0003070 Simmondsia chinensis HOM05D005088 ORTHO05D006914 6.2e-37 158.3 127 59.8
HPP92_010645 Vanilla planifolia HOM05D005088 ORTHO05D006914 6.2e-37 158.3 168 51.8
A09p49430 Brassica napus HOM05D005088 ORTHO05D006914 8.1e-37 157.9 169 50.3
C08p31790 Brassica napus HOM05D005088 ORTHO05D006914 8.1e-37 157.9 169 50.3
BolC8t50800H Brassica oleracea HOM05D005088 ORTHO05D006914 8.1e-37 157.9 169 50.3
BraA09t40396Z Brassica rapa HOM05D005088 ORTHO05D006914 8.1e-37 157.9 169 50.3
Glyma.19G052200 Glycine max HOM05D005088 ORTHO05D006914 1.4e-36 157.1 166 50.0
QL02p073814 Quercus lobata HOM05D005088 ORTHO05D006914 2.4e-36 156.4 174 48.9
Solyc01g112010.3 Solanum lycopersicum HOM05D005088 ORTHO05D006914 4.0e-36 155.6 163 52.8
HPP92_010722 Vanilla planifolia HOM05D005088 ORTHO05D006914 4.0e-36 155.6 168 51.8
AT3G56510 Arabidopsis thaliana HOM05D005088 ORTHO05D006914 6.9e-36 154.8 170 48.8
DCAR_011267 Daucus carota HOM05D005088 ORTHO05D006914 6.9e-36 154.8 165 50.9
RcHm_v2.0_Chr2g0173471 Rosa chinensis HOM05D005088 ORTHO05D006914 6.9e-36 154.8 175 49.7
CiPaw.03G046700 Carya illinoinensis HOM05D005088 ORTHO05D006914 1.5e-35 153.7 171 49.1
FvH4_6g52000 Fragaria vesca HOM05D005088 ORTHO05D006914 1.5e-35 153.7 174 49.4
arahy.Tifrunner.gnm1.ann1.NBA2EB Arachis hypogaea HOM05D005088 ORTHO05D006914 2.0e-35 153.3 166 50.0
MD09G1021000 Malus domestica HOM05D005088 ORTHO05D006914 3.4e-35 152.5 164 50.6
FAN05G1017 Fragaria x ananassa HOM05D005088 ORTHO05D006914 4.5e-35 152.1 175 48.6
FAN09G0922 Fragaria x ananassa HOM05D005088 ORTHO05D006914 5.8e-35 151.8 175 48.6
FAN14G4588 Fragaria x ananassa HOM05D005088 ORTHO05D006914 5.8e-35 151.8 175 48.6
Aqoxy5G03675 Aquilegia oxysepala HOM05D005088 ORTHO05D006914 1.0e-34 151.0 166 48.8
FAN02G1545 Fragaria x ananassa HOM05D005088 ORTHO05D006914 1.7e-34 150.2 175 48.6
Aqoxy7G00744 Aquilegia oxysepala HOM05D005088 ORTHO05D006914 6.5e-34 148.3 167 47.9
arahy.Tifrunner.gnm1.ann1.XI631Y Arachis hypogaea HOM05D005088 ORTHO05D006914 8.4e-34 147.9 161 49.7
PSO210G5838 Papaver somniferum HOM05D005088 ORTHO05D006914 8.4e-34 147.9 168 47.0
PSO210G1672 Papaver somniferum HOM05D005088 ORTHO05D006914 1.4e-33 147.1 158 46.8
Psat1g081640 Pisum sativum HOM05D005088 ORTHO05D006914 1.9e-33 146.7 165 47.3
Medtr6g021760 Medicago truncatula HOM05D005088 ORTHO05D006914 3.2e-33 146.0 144 50.7
AUR62029179 Chenopodium quinoa HOM05D005088 ORTHO05D006914 4.2e-33 145.6 115 59.1
Os07g0662600 Oryza sativa ssp. japonica HOM05D005088 ORTHO05D006914 5.5e-33 145.2 166 48.2
PGSC0003DMG400018652 Solanum tuberosum HOM05D005088 ORTHO05D006914 7.1e-33 144.8 134 55.2
Lj4g0026117 Lotus japonicus HOM05D005088 ORTHO05D006914 2.7e-32 142.9 156 48.7
MCO13G391 Micromonas commoda HOM05D005088 ORTHO05D006914 3.5e-32 142.5 115 57.4
Zm00001eb110920 Zea mays HOM05D005088 ORTHO05D006914 3.5e-32 142.5 151 49.7
Ca_04381_v3 Cicer arietinum L. HOM05D005088 ORTHO05D006914 1.8e-31 140.2 118 55.1
arahy.Tifrunner.gnm1.ann1.NQR6QW Arachis hypogaea HOM05D005088 ORTHO05D006914 5.1e-31 138.7 178 43.3
Ciclev10017686m.g Citrus clementina HOM05D005088 ORTHO05D006914 1.6e-29 133.7 96 63.5
SHI10481 Sapria himalayana HOM05D005088 ORTHO05D006914 4.8e-29 132.1 194 42.8
TAR629G1146 Trochodendron aralioides HOM05D005088 ORTHO05D006914 1.4e-28 130.6 98 62.2
Psat5g064920 Pisum sativum HOM05D005088 ORTHO05D006914 5.9e-27 125.2 138 47.8
PRCOL_00000286 Prasinoderma coloniale HOM05D005088 ORTHO05D006914 3.0e-23 112.8 170 38.8
PSO782G2229 Papaver somniferum HOM05D005088 ORTHO05D006914 2.5e-22 109.8 167 41.3
SpUn0233_0020 Schrenkiella parvula HOM05D005088 ORTHO05D006914 4.1e-20 102.4 157 40.1
MD09G1021200 Malus domestica HOM05D005088 ORTHO05D006914 1.1e-17 94.4 81 55.6
BcaB02g08365 Brassica carinata HOM05D005088 ORTHO05D006914 3.3e-14 82.8 182 33.0
Oeu060752.1 Olea europaea HOM05D005088 ORTHO05D006914 4.3e-14 82.4 125 41.6
Sed0009105 Sechium edule HOM05D005088 ORTHO05D006914 6.9e-12 75.1 143 37.8
SGA_v2.0_scaffold18G08253 Striga asiatica HOM05D005088 ORTHO05D006914 4.7e-08 62.4 45 62.2
Sp5g06120 Schrenkiella parvula HOM05D005088 ORTHO05D006914 1.0e-07 61.2 70 47.1
CDE09G0918 Ceratophyllum demersum HOM05D005088 ORTHO05D006914 3.9e-07 59.3 45 57.8
DCAR_001396 Daucus carota HOM05D005088 ORTHO05D006914 9.7e-06 54.7 57 45.6


User provided reference genes

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