Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO297G0009 Selaginella moellendorffii HOM05D001816 ORTHO05D374701 2.9e-54 214.9 106 100.0
SMO234G0071 Selaginella moellendorffii HOM05D001816 ORTHO05D002001 6.4e-09 64.3 87 46.0
CDE05G1766 Ceratophyllum demersum HOM05D001816 ORTHO05D002001 2.4e-08 62.4 66 51.5
Ca_15279_v3 Cicer arietinum L. HOM05D001816 ORTHO05D002001 1.6e-07 59.7 66 47.0
Solyc01g111990.3 Solanum lycopersicum HOM05D001816 ORTHO05D002001 1.6e-07 59.7 68 48.5
Nn6g31779 Nelumbo nucifera HOM05D001816 ORTHO05D002001 2.1e-07 59.3 68 50.0
THA.LOC104807386 Tarenaya hassleriana HOM05D001816 ORTHO05D002001 2.1e-07 59.3 66 51.5
CSS0006826 Camellia sinensis var. sinensis HOM05D001816 ORTHO05D002001 2.7e-07 58.9 66 48.5
FAN27G0881 Fragaria x ananassa HOM05D001816 ORTHO05D002001 2.7e-07 58.9 85 43.5
Medtr3g118360 Medicago truncatula HOM05D001816 ORTHO05D002001 2.7e-07 58.9 66 47.0
Sopen01g054040 Solanum pennellii HOM05D001816 ORTHO05D002001 2.7e-07 58.9 68 48.5
Atru.chr5.3488 Acer truncatum HOM05D001816 ORTHO05D002001 3.5e-07 58.5 66 48.5
arahy.Tifrunner.gnm1.ann1.1BU1FJ Arachis hypogaea HOM05D001816 ORTHO05D002001 3.5e-07 58.5 66 48.5
Lalb_Chr08g0246781 Lupinus albus HOM05D001816 ORTHO05D002001 3.5e-07 58.5 66 48.5
ATR0712G016 Amborella trichopoda HOM05D001816 ORTHO05D002001 4.6e-07 58.2 87 41.4
HanXRQChr17g0559451 Helianthus annuus HOM05D001816 ORTHO05D002001 4.6e-07 58.2 66 47.0
Nitab4.5_0002486g0050 Nicotiana tabacum HOM05D001816 ORTHO05D002001 4.6e-07 58.2 68 47.1
Nitab4.5_0003603g0030 Nicotiana tabacum HOM05D001816 ORTHO05D002001 4.6e-07 58.2 68 47.1
Prupe.8G174300 Prunus persica HOM05D001816 ORTHO05D002001 4.6e-07 58.2 87 43.7
Sc12g0007070 Simmondsia chinensis HOM05D001816 ORTHO05D002001 4.6e-07 58.2 66 47.0
TWI31G0479 Tripterygium wilfordii HOM05D001816 ORTHO05D002001 4.6e-07 58.2 66 48.5
AagrBONN_evm.TU.Sc2ySwM_368.2591 Anthoceros agrestis HOM05D001816 ORTHO05D002001 6.0e-07 57.8 80 45.0
Dinv41898 Davidia involucrata HOM05D001816 ORTHO05D002001 6.0e-07 57.8 66 48.5
FvH4_2g16070 Fragaria vesca HOM05D001816 ORTHO05D002001 6.0e-07 57.8 85 43.5
FAN15G3397 Fragaria x ananassa HOM05D001816 ORTHO05D002001 6.0e-07 57.8 85 43.5
FAN20G1974 Fragaria x ananassa HOM05D001816 ORTHO05D002001 6.0e-07 57.8 85 43.5
FAN24G0316 Fragaria x ananassa HOM05D001816 ORTHO05D002001 6.0e-07 57.8 85 43.5
MD05G1130000 Malus domestica HOM05D001816 ORTHO05D002001 6.0e-07 57.8 89 42.7
MD10G1133000 Malus domestica HOM05D001816 ORTHO05D002001 6.0e-07 57.8 89 42.7
CiPaw.05G091200 Carya illinoinensis HOM05D001816 ORTHO05D002001 7.8e-07 57.4 66 50.0
Manes.04G068300 Manihot esculenta HOM05D001816 ORTHO05D002001 7.8e-07 57.4 66 48.5
COL.COLO4_17969 Corchorus olitorius HOM05D001816 ORTHO05D002001 1.0e-06 57.0 66 50.0
DCAR_022835 Daucus carota HOM05D001816 ORTHO05D002001 1.0e-06 57.0 66 47.0
Duzib132G0368 Durio zibethinus HOM05D001816 ORTHO05D002001 1.0e-06 57.0 66 50.0
ECA233G4820 Erigeron canadensis HOM05D001816 ORTHO05D002001 1.0e-06 57.0 66 45.5
Glyma.04G001600 Glycine max HOM05D001816 ORTHO05D002001 1.0e-06 57.0 66 47.0
Glyma.06G001100 Glycine max HOM05D001816 ORTHO05D002001 1.0e-06 57.0 66 47.0
Psat5g000880 Pisum sativum HOM05D001816 ORTHO05D002001 1.0e-06 57.0 66 43.9
Thecc.02G050000 Theobroma cacao HOM05D001816 ORTHO05D002001 1.0e-06 57.0 66 50.0
TPR.G38581 Trifolium pratense HOM05D001816 ORTHO05D002001 1.0e-06 57.0 66 43.9
Actinidia20551 Actinidia chinensis HOM05D001816 ORTHO05D002001 1.3e-06 56.6 66 47.0
EL10Ac9g21289 Beta vulgaris HOM05D001816 ORTHO05D002001 1.3e-06 56.6 68 44.1
CAN.G1235.26 Capsicum annuum HOM05D001816 ORTHO05D002001 1.3e-06 56.6 68 45.6
Migut.B00031 Erythranthe guttata HOM05D001816 ORTHO05D002001 1.3e-06 56.6 66 47.0
Gohir.A03G208200 Gossypium hirsutum HOM05D001816 ORTHO05D002001 1.3e-06 56.6 66 50.0
Gohir.D02G229700 Gossypium hirsutum HOM05D001816 ORTHO05D002001 1.3e-06 56.6 66 50.0
Gorai.005G257400 Gossypium raimondii HOM05D001816 ORTHO05D002001 1.3e-06 56.6 66 50.0
Peaxi162Scf00362g00360 Petunia axillaris HOM05D001816 ORTHO05D002001 1.3e-06 56.6 68 45.6
RcHm_v2.0_Chr6g0279751 Rosa chinensis HOM05D001816 ORTHO05D002001 1.3e-06 56.6 87 43.7
arahy.Tifrunner.gnm1.ann1.X97WXI Arachis hypogaea HOM05D001816 ORTHO05D002001 1.7e-06 56.2 66 48.5
Cfa005345 Carpinus fangiana HOM05D001816 ORTHO05D002001 1.7e-06 56.2 85 42.4
Cc09_g10520 Coffea canephora HOM05D001816 ORTHO05D002001 1.7e-06 56.2 68 44.1
Haze_02022 Corylus avellana HOM05D001816 ORTHO05D002001 1.7e-06 56.2 85 42.4
Lj1g0012910 Lotus japonicus HOM05D001816 ORTHO05D002001 1.7e-06 56.2 66 47.0
Potri.009G141300 Populus trichocarpa HOM05D001816 ORTHO05D002001 1.7e-06 56.2 66 48.5
Sabra09G0109800 Salix brachista HOM05D001816 ORTHO05D002001 1.7e-06 56.2 66 48.5
Mapoly0065s0015 Marchantia polymorpha HOM05D001816 ORTHO05D002001 2.3e-06 55.8 66 48.5
Oeu051849.1 Olea europaea HOM05D001816 ORTHO05D002001 2.3e-06 55.8 66 47.0
SGA_v2.0_scaffold32G13329 Striga asiatica HOM05D001816 ORTHO05D002001 2.3e-06 55.8 66 45.5
AUR62009961 Chenopodium quinoa HOM05D001816 ORTHO05D002001 3.0e-06 55.5 68 47.1
AUR62012953 Chenopodium quinoa HOM05D001816 ORTHO05D002001 3.0e-06 55.5 68 47.1
Phvul.007G142900 Phaseolus vulgaris HOM05D001816 ORTHO05D002001 3.0e-06 55.5 66 45.5
Phvul.009G116900 Phaseolus vulgaris HOM05D001816 ORTHO05D002001 3.0e-06 55.5 66 45.5
Pp3c2_4380 Physcomitrium patens HOM05D001816 ORTHO05D002001 3.0e-06 55.5 68 47.1
PGR142G1779 Punica granatum HOM05D001816 ORTHO05D002001 3.0e-06 55.5 68 44.1
QL11p055386 Quercus lobata HOM05D001816 ORTHO05D002001 3.0e-06 55.5 66 47.0
QL11p055697 Quercus lobata HOM05D001816 ORTHO05D002001 3.0e-06 55.5 66 47.0
TAR628G0285 Trochodendron aralioides HOM05D001816 ORTHO05D002001 3.0e-06 55.5 66 45.5
Zm00001eb371640 Zea mays HOM05D001816 ORTHO05D002001 3.9e-06 55.1 68 44.1
MELO3C013645.2 Cucumis melo HOM05D001816 ORTHO05D002001 5.1e-06 54.7 68 45.6
CsaV3_6G012710 Cucumis sativus L. HOM05D001816 ORTHO05D002001 5.1e-06 54.7 68 45.6
Sed0019949 Sechium edule HOM05D001816 ORTHO05D002001 5.1e-06 54.7 68 45.6
unitig_21.g20851 Utricularia gibba HOM05D001816 ORTHO05D002001 5.1e-06 54.7 66 43.9
ClCG02G010990 Citrullus lanatus HOM05D001816 ORTHO05D002001 6.6e-06 54.3 66 45.5
Eucgr.I01492 Eucalyptus grandis HOM05D001816 ORTHO05D002001 6.6e-06 54.3 66 43.9
vmacro17274 Vaccinium macrocarpon HOM05D001816 ORTHO05D002001 6.6e-06 54.3 66 43.9
VMungo1309G1075 Vigna mungo HOM05D001816 ORTHO05D002001 6.6e-06 54.3 66 43.9
CANSAT25G0387 Cannabis sativa HOM05D001816 ORTHO05D002001 8.6e-06 53.9 68 48.5
Rhsim05G0050000 Rhododendron simsii HOM05D001816 ORTHO05D002001 8.6e-06 53.9 66 43.9
RcHm_v2.0_Chr6g0279761 Rosa chinensis HOM05D001816 ORTHO05D002001 8.6e-06 53.9 101 34.7


User provided reference genes

Program Settings