Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO271G0139 Selaginella moellendorffii HOM05D003625 ORTHO05D004382 0.0e+00 1948.3 1011 100.0
Mapoly0033s0004 Marchantia polymorpha HOM05D003625 ORTHO05D004382 9.9e-184 648.3 1076 41.0
Pp3c15_10800 Physcomitrium patens HOM05D003625 ORTHO05D004382 7.4e-171 605.5 1035 40.4
Pp3c9_3000 Physcomitrium patens HOM05D003625 ORTHO05D004382 2.0e-168 597.4 1073 39.1
ATR0626G050 Amborella trichopoda HOM05D003625 ORTHO05D004382 3.1e-129 467.2 1075 34.1
AagrBONN_evm.TU.Sc2ySwM_228.4764 Anthoceros agrestis HOM05D000001 ORTHO05D000003 8.0e-125 452.6 1077 33.7
Aqoxy2G00575 Aquilegia oxysepala HOM05D003625 ORTHO05D004382 1.7e-114 418.3 1036 32.5
TAR365G1186 Trochodendron aralioides HOM05D003625 ORTHO05D004382 2.8e-114 417.5 1060 32.5
PSO170G6480 Papaver somniferum HOM05D003625 ORTHO05D004382 1.8e-113 414.8 1057 32.5
PSO407G0030 Papaver somniferum HOM05D003625 ORTHO05D004382 1.0e-111 409.1 1063 32.8
MBI19_g35956_MAGBIO Magnolia biondii HOM05D003625 ORTHO05D004382 1.3e-111 408.7 1059 32.6
Cfa011439 Carpinus fangiana HOM05D003625 ORTHO05D004382 7.8e-104 382.9 1021 31.3
CAN.G426.9 Capsicum annuum HOM05D003625 ORTHO05D004382 2.3e-103 381.3 1017 31.7
Thecc.07G010400 Theobroma cacao HOM05D003625 ORTHO05D004382 2.9e-103 380.9 1020 31.7
TWI59G0316 Tripterygium wilfordii HOM05D003625 ORTHO05D004382 2.9e-103 380.9 1027 31.5
Manes.03G013700 Manihot esculenta HOM05D003625 ORTHO05D004382 8.6e-103 379.4 1003 31.8
Gorai.009G451700 Gossypium raimondii HOM05D003625 ORTHO05D004382 4.3e-102 377.1 1021 31.4
CDE05G3415 Ceratophyllum demersum HOM05D003625 ORTHO05D004382 7.3e-102 376.3 1040 31.4
Dinv32982 Davidia involucrata HOM05D003625 ORTHO05D004382 9.5e-102 375.9 1035 31.0
Gohir.A04G004900 Gossypium hirsutum HOM05D003625 ORTHO05D004382 9.5e-102 375.9 1019 31.8
Ciclev10018730m.g Citrus clementina HOM05D003625 ORTHO05D004382 1.6e-101 375.2 1027 31.0
CsaV3_1G033940 Cucumis sativus L. HOM05D003625 ORTHO05D004382 1.6e-101 375.2 1019 31.2
CANSAT25G1777 Cannabis sativa HOM05D003625 ORTHO05D004382 2.1e-101 374.8 1022 31.8
Cpa.g.sc60.39 Carica papaya HOM05D003625 ORTHO05D004382 2.8e-101 374.4 1041 30.9
Gohir.D05G385000 Gossypium hirsutum HOM05D003625 ORTHO05D004382 1.8e-100 371.7 1024 31.4
Potri.014G135700 Populus trichocarpa HOM05D003625 ORTHO05D004382 4.0e-100 370.5 1023 30.7
GSVIVG01011024001 Vitis vinifera HOM05D003625 ORTHO05D004382 4.0e-100 370.5 1002 32.6
CSS0005803 Camellia sinensis var. sinensis HOM05D003625 ORTHO05D004382 6.8e-100 369.8 1007 32.1
COL.COLO4_09853 Corchorus olitorius HOM05D003625 ORTHO05D004382 1.5e-99 368.6 1013 31.3
Nn3g21233 Nelumbo nucifera HOM05D003625 ORTHO05D004382 1.3e-98 365.5 876 34.4
Nitab4.5_0001651g0100 Nicotiana tabacum HOM05D003625 ORTHO05D004382 8.3e-98 362.8 1039 31.8
Hma1.2p1_0209F.1_g089230 Hydrangea macrophylla HOM05D003625 ORTHO05D004382 1.2e-96 359.0 1027 30.9
PGR044G2464 Punica granatum HOM05D003625 ORTHO05D004382 3.5e-96 357.5 1028 30.8
Nitab4.5_0010231g0010 Nicotiana tabacum HOM05D003625 ORTHO05D004382 5.9e-96 356.7 1025 31.8
Sopen09g029170 Solanum pennellii HOM05D003625 ORTHO05D004382 5.9e-96 356.7 1029 30.8
Phvul.L001843 Phaseolus vulgaris HOM05D003625 ORTHO05D004382 1.0e-95 355.9 1021 30.8
Solyc09g074330.3 Solanum lycopersicum HOM05D003625 ORTHO05D004382 1.3e-95 355.5 1029 30.7
Cc01_g20080 Coffea canephora HOM05D003625 ORTHO05D004382 3.9e-95 354.0 1013 30.1
Lj3g0001853 Lotus japonicus HOM05D003625 ORTHO05D004382 5.0e-95 353.6 1027 30.7
Potri.002G213400 Populus trichocarpa HOM05D003625 ORTHO05D004382 1.1e-94 352.4 864 33.1
EL10Ac7g17149 Beta vulgaris HOM05D003625 ORTHO05D004382 1.9e-94 351.7 1037 30.2
VMungo1080G0322 Vigna mungo HOM05D003625 ORTHO05D004382 3.3e-94 350.9 1024 31.7
CiPaw.08G101000 Carya illinoinensis HOM05D003625 ORTHO05D004382 4.3e-94 350.5 1046 29.7
RcHm_v2.0_Chr6g0292351 Rosa chinensis HOM05D003625 ORTHO05D004382 1.2e-93 349.0 1040 30.2
Glyma.15G042000 Glycine max HOM05D003625 ORTHO05D004382 4.7e-93 347.1 1026 31.5
FAN24G2516 Fragaria x ananassa HOM05D003625 ORTHO05D004382 1.4e-92 345.5 1082 29.9
Oeu022807.1 Olea europaea HOM05D003625 ORTHO05D004382 3.1e-92 344.4 1026 29.6
arahy.Tifrunner.gnm1.ann1.6HBC95 Arachis hypogaea HOM05D003625 ORTHO05D004382 4.0e-92 344.0 1027 30.2
arahy.Tifrunner.gnm1.ann1.E19P6N Arachis hypogaea HOM05D003625 ORTHO05D004382 5.2e-92 343.6 1021 30.2
Medtr2g096290 Medicago truncatula HOM05D003625 ORTHO05D004382 2.6e-91 341.3 1021 29.2
Eucgr.C03805 Eucalyptus grandis HOM05D003625 ORTHO05D004382 7.5e-91 339.7 1054 29.8
Psat5g282480 Pisum sativum HOM05D003625 ORTHO05D004382 9.8e-91 339.3 1025 29.4
Sabra14G0102100 Salix brachista HOM05D003625 ORTHO05D004382 9.8e-91 339.3 1091 28.7
FvH4_2g24490 Fragaria vesca HOM05D003625 ORTHO05D004382 1.3e-90 339.0 1082 29.9
Dinv11285 Davidia involucrata HOM05D003625 ORTHO05D004382 8.3e-90 336.3 991 30.9
Ca_19197_v3 Cicer arietinum L. HOM05D003625 ORTHO05D004382 1.1e-89 335.9 1024 30.8
FAN20G2140 Fragaria x ananassa HOM05D003625 ORTHO05D004382 1.9e-89 335.1 1082 29.4
FAN27G0529 Fragaria x ananassa HOM05D003625 ORTHO05D004382 1.9e-89 335.1 1080 29.2
THA.LOC104801203 Tarenaya hassleriana HOM05D003625 ORTHO05D004382 3.2e-89 334.3 1022 30.4
Prupe.8G250800 Prunus persica HOM05D003625 ORTHO05D004382 9.2e-89 332.8 1046 29.3
Sabra02G0149300 Salix brachista HOM05D003625 ORTHO05D004382 1.6e-88 332.0 864 32.5
MD02G1277900 Malus domestica HOM05D003625 ORTHO05D004382 2.0e-88 331.6 1050 29.8
Lj2A1183G17 Lonicera japonica HOM05D003625 ORTHO05D004382 1.3e-87 328.9 1072 31.0
QL93p2003_0013 Quercus lobata HOM05D003625 ORTHO05D004382 3.0e-87 327.8 1026 29.2
FAN15G0592 Fragaria x ananassa HOM05D003625 ORTHO05D004382 8.6e-87 326.2 1105 29.0
Glyma.13G332300 Glycine max HOM05D003625 ORTHO05D004382 1.9e-86 325.1 1024 30.0
Ca_01352_v3 Cicer arietinum L. HOM05D003625 ORTHO05D004382 9.5e-86 322.8 1019 29.8
Lalb_Chr22g0350011 Lupinus albus HOM05D003625 ORTHO05D004382 2.8e-85 321.2 1027 29.2
MELO3C020662.2 Cucumis melo HOM05D003625 ORTHO05D004382 3.6e-85 320.9 1105 29.0
Cfa006055 Carpinus fangiana HOM05D003625 ORTHO05D006197 8.1e-85 319.7 1017 29.8
QL12p023448 Quercus lobata HOM05D003625 ORTHO05D004382 8.9e-84 316.2 1025 29.5
SGA_v2.0_scaffold1G00428 Striga asiatica HOM05D003625 ORTHO05D004382 7.5e-83 313.2 1045 28.6
Duzib213G0855 Durio zibethinus HOM05D003625 ORTHO05D004382 2.9e-82 311.2 931 30.4
Sed0013189 Sechium edule HOM05D003625 ORTHO05D004382 6.4e-82 310.1 552 38.2
vmacro02517 Vaccinium macrocarpon HOM05D003625 ORTHO05D004382 4.1e-81 307.4 891 31.4
MSTRG.18201 Avicennia marina HOM05D003625 ORTHO05D004382 9.2e-81 306.2 1032 29.7
Zm00001eb115600 Zea mays HOM05D003625 ORTHO05D004382 9.2e-81 306.2 548 38.0
Lj3g0005082 Lotus japonicus HOM05D003625 ORTHO05D004382 2.1e-80 305.1 1017 28.0
Zm00001eb165880 Zea mays HOM05D003625 ORTHO05D004382 1.3e-79 302.4 555 37.1
Medtr4g063030 Medicago truncatula HOM05D003625 ORTHO05D004382 3.0e-79 301.2 1055 28.2
Lalb_Chr01g0003851 Lupinus albus HOM05D003625 ORTHO05D004382 5.1e-79 300.4 1030 28.5
BcaB01g01939 Brassica carinata HOM05D003625 ORTHO05D004382 8.6e-79 299.7 1020 29.5
Peaxi162Scf00006g03621 Petunia axillaris HOM05D003625 ORTHO05D004382 1.5e-78 298.9 992 29.3
TPR.G1039 Trifolium pratense HOM05D003625 ORTHO05D004382 2.5e-78 298.1 1028 28.9
SalBow3G1663 Salvia bowleyana HOM05D003625 ORTHO05D004382 1.4e-76 292.4 1009 29.3
HanXRQChr05g0150041 Helianthus annuus HOM05D003625 ORTHO05D004382 1.8e-76 292.0 1001 28.8
HPP92_011331 Vanilla planifolia HOM05D003625 ORTHO05D004382 2.4e-76 291.6 583 36.4
Aa31LG5G2610 Aethionema arabicum HOM05D003625 ORTHO05D004382 8.9e-76 289.7 1030 28.8
ClCG03G001700 Citrullus lanatus HOM05D003625 ORTHO05D004382 1.5e-75 288.9 581 34.9
BraA09t35887Z Brassica rapa HOM05D003625 ORTHO05D004382 4.4e-75 287.3 1009 27.9
ECA236G1413 Erigeron canadensis HOM05D003625 ORTHO05D004382 5.8e-75 287.0 1018 29.7
HanXRQChr06g0164001 Helianthus annuus HOM05D003625 ORTHO05D004382 5.8e-75 287.0 996 28.2
Psat7g219280 Pisum sativum HOM05D003625 ORTHO05D004382 7.6e-75 286.6 1056 27.5
Duzib170G0264 Durio zibethinus HOM05D003625 ORTHO05D004382 9.9e-75 286.2 832 30.2
CiPaw.13G100200 Carya illinoinensis HOM05D003625 ORTHO05D004382 4.9e-74 283.9 847 30.8
C09p02500 Brassica napus HOM05D003625 ORTHO05D004382 1.4e-73 282.3 1013 28.2
QL01p033546 Quercus lobata HOM05D003625 ORTHO05D004382 1.4e-73 282.3 931 29.4
A09p02400 Brassica napus HOM05D003625 ORTHO05D004382 3.2e-73 281.2 1008 28.1
Haze_04796 Corylus avellana HOM05D003625 ORTHO05D004382 3.2e-73 281.2 1014 28.4
Duzib268G0343 Durio zibethinus HOM05D003625 ORTHO05D004382 5.4e-73 280.4 912 28.9
BolC9t53180H Brassica oleracea HOM05D003625 ORTHO05D004382 2.7e-72 278.1 1008 28.2
BcaB01g01983 Brassica carinata HOM05D003625 ORTHO05D004382 7.8e-72 276.6 1016 28.1
DCAR_005834 Daucus carota HOM05D003625 ORTHO05D004382 7.8e-72 276.6 1022 28.5
arahy.Tifrunner.gnm1.ann1.TJRY6P Arachis hypogaea HOM05D003625 ORTHO05D004382 2.3e-71 275.0 546 35.3
Sp6g03120 Schrenkiella parvula HOM05D003625 ORTHO05D004382 2.3e-71 275.0 1025 28.0
Thhalv10028409m.g Eutrema salsugineum HOM05D003625 ORTHO05D004382 1.1e-70 272.7 1036 27.9
DCAR_002782 Daucus carota HOM05D003625 ORTHO05D004382 5.6e-70 270.4 1032 27.8
arahy.Tifrunner.gnm1.ann1.L6Y1E3 Arachis hypogaea HOM05D003625 ORTHO05D004382 9.6e-70 269.6 546 34.6
SEGI_20946 Sequoiadendron giganteum HOM05D003625 ORTHO05D004382 1.6e-69 268.9 718 31.3
Haze_24021 Corylus avellana HOM05D003625 ORTHO05D004382 2.8e-69 268.1 576 34.4
AL6G49860 Arabidopsis lyrata HOM05D003625 ORTHO05D004382 1.1e-68 266.2 1019 28.4
Lsat_1_v5_gn_8_55721 Lactuca sativa HOM05D003625 ORTHO05D004382 3.1e-68 264.6 554 36.8
AT4G03090 Arabidopsis thaliana HOM05D003625 ORTHO05D004382 6.9e-68 263.5 1017 28.4
AUR62034599 Chenopodium quinoa HOM05D003625 ORTHO05D004382 4.4e-67 260.8 507 35.1
Rhsim13G0018500 Rhododendron simsii HOM05D003625 ORTHO05D004382 7.6e-67 260.0 975 28.4
AUR62034443 Chenopodium quinoa HOM05D003625 ORTHO05D004382 1.7e-66 258.8 1003 27.0
AUR62028969 Chenopodium quinoa HOM05D003625 ORTHO05D004382 1.9e-65 255.4 1027 26.2
Carub.0006s3397 Capsella rubella HOM05D003625 ORTHO05D004382 3.3e-62 244.6 1016 27.3
Atru.chr5.1297 Acer truncatum HOM05D003625 ORTHO05D004382 2.9e-58 231.5 379 39.6
CARHR251520 Cardamine hirsuta HOM05D003625 ORTHO05D004382 2.7e-56 224.9 543 30.9
Lsat_1_v5_gn_5_189721 Lactuca sativa HOM05D003625 ORTHO05D004382 7.4e-54 216.9 1012 25.2
BraA02t07497Z Brassica rapa HOM05D003625 ORTHO05D004382 1.8e-52 212.2 860 26.0
FvH4_2g24530 Fragaria vesca HOM05D003625 ORTHO05D004382 4.9e-50 204.1 319 40.8
BcaC03g16206 Brassica carinata HOM05D003625 ORTHO05D004382 2.4e-49 201.8 577 30.2
unitig_0.g1186 Utricularia gibba HOM05D003625 ORTHO05D004382 3.2e-49 201.4 915 26.0
SHI14627 Sapria himalayana HOM05D003625 ORTHO05D004382 5.1e-47 194.1 1054 24.8
BcaB05g23686 Brassica carinata HOM05D003625 ORTHO05D004382 1.6e-45 189.1 479 30.9
BolC2t10009H Brassica oleracea HOM05D003625 ORTHO05D004382 3.1e-44 184.9 553 29.8
Psat5g051000 Pisum sativum HOM05D003625 ORTHO05D004382 9.0e-44 183.3 425 32.5
CSS0019256 Camellia sinensis var. sinensis HOM05D003625 ORTHO05D004382 5.8e-43 180.6 276 42.4
TPR.G34306 Trifolium pratense HOM05D003625 ORTHO05D004382 1.1e-41 176.4 335 35.5
A02p25090 Brassica napus HOM05D003625 ORTHO05D004382 1.2e-40 172.9 884 24.1
Ca_01349_v3 Cicer arietinum L. HOM05D003625 ORTHO05D004382 7.9e-40 170.2 662 27.8
Sc17g0003670 Simmondsia chinensis HOM05D003625 ORTHO05D004382 7.9e-40 170.2 292 36.6
C02p39820 Brassica napus HOM05D003625 ORTHO05D004382 2.1e-32 145.6 826 23.4
TPR.G40473 Trifolium pratense HOM05D003625 ORTHO05D004382 2.7e-32 145.2 265 35.1
Atru.chr5.1298 Acer truncatum HOM05D003625 ORTHO05D004382 1.4e-28 132.9 570 25.8
SEGI_15323 Sequoiadendron giganteum HOM05D003625 ORTHO05D004382 6.5e-26 124.0 142 53.5
Sc17g0003660 Simmondsia chinensis HOM05D003625 ORTHO05D004382 8.5e-26 123.6 251 35.9
arahy.Tifrunner.gnm1.ann1.AN8C0D Arachis hypogaea HOM05D003625 ORTHO05D004382 1.4e-23 116.3 248 33.5
arahy.Tifrunner.gnm1.ann1.DI3WFZ Arachis hypogaea HOM05D003625 ORTHO05D004382 1.8e-23 115.9 248 34.3
CBR_g32447 Chara braunii HOM05D003625 ORTHO05D004382 3.3e-22 111.7 156 40.4
Ah.04g162700 Amaranthus hybridus HOM05D003625 ORTHO05D004382 9.7e-22 110.2 686 23.9
AUR62034492 Chenopodium quinoa HOM05D003625 ORTHO05D004382 2.8e-21 108.6 167 40.1
CBR_g32446 Chara braunii HOM05D000019 ORTHO05D000353 7.0e-20 104.0 139 43.9
Sc17g0003680 Simmondsia chinensis HOM05D003625 ORTHO05D004382 7.0e-20 104.0 235 31.1
CBR_g32449 Chara braunii HOM05D003625 ORTHO05D004382 9.1e-20 103.6 244 32.0
Prupe.8G267900 Prunus persica HOM05D003625 ORTHO05D004382 7.7e-19 100.5 228 32.9
CARHR251510 Cardamine hirsuta HOM05D003625 ORTHO05D004382 5.5e-17 94.4 239 33.1
TPR.G34304 Trifolium pratense HOM05D003625 ORTHO05D004382 6.1e-16 90.9 224 29.9
HPP92_011330 Vanilla planifolia HOM05D003625 ORTHO05D004382 2.0e-14 85.9 89 51.7
HanXRQChr12g0370811 Helianthus annuus HOM05D003625 ORTHO05D004382 7.4e-14 84.0 204 30.9
CSS0039297 Camellia sinensis var. sinensis HOM05D003625 ORTHO05D004382 1.1e-12 80.1 172 37.2
CSS0041154 Camellia sinensis var. sinensis HOM05D003625 ORTHO05D004382 1.1e-12 80.1 86 53.5
QL01p033556 Quercus lobata HOM05D003625 ORTHO05D004382 3.1e-12 78.6 118 42.4
QL05p076995 Quercus lobata HOM05D003625 ORTHO05D004382 9.1e-12 77.0 91 44.0
Hma1.2p1_0111F.1_g053430 Hydrangea macrophylla HOM05D003625 ORTHO05D004382 2.6e-11 75.5 118 37.3
QL12p023546 Quercus lobata HOM05D003625 ORTHO05D004382 2.6e-11 75.5 147 37.4
Haze_24022 Corylus avellana HOM05D003625 ORTHO05D004382 5.0e-10 71.2 342 24.3
TPR.G8723 Trifolium pratense HOM05D000036 ORTHO05D012241 2.5e-09 68.9 95 42.1
BolC9t54863H Brassica oleracea HOM05D000096 ORTHO05D000045 1.2e-08 66.6 167 28.1
Os05g0188600 Oryza sativa ssp. japonica HOM05D003625 ORTHO05D004382 3.0e-07 62.0 96 37.5
Lalb_Chr24g0394281 Lupinus albus HOM05D003625 ORTHO05D004382 5.2e-07 61.2 150 34.0
CDE11G0573 Ceratophyllum demersum HOM05D003625 ORTHO05D004382 3.3e-06 58.5 189 28.0


User provided reference genes

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