Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO246G0007 Selaginella moellendorffii HOM05D005328 ORTHO05D006049 5.4e-27 123.6 64 100.0
SMO143G0138 Selaginella moellendorffii HOM05D005328 ORTHO05D006049 7.0e-27 123.2 63 100.0
ATR0751G077 Amborella trichopoda HOM05D005328 ORTHO05D006049 2.0e-21 105.1 63 84.1
QL05p065813 Quercus lobata HOM05D005328 ORTHO05D006049 5.7e-21 103.6 63 84.1
QL05p066147 Quercus lobata HOM05D005328 ORTHO05D006049 5.7e-21 103.6 63 84.1
Aqoxy6G01137 Aquilegia oxysepala HOM05D005328 ORTHO05D006049 1.3e-20 102.4 63 82.5
Lsat_1_v5_gn_4_65161 Lactuca sativa HOM05D005328 ORTHO05D006049 1.7e-20 102.1 63 82.5
Oeu016925.1 Olea europaea HOM05D005328 ORTHO05D006049 1.7e-20 102.1 63 82.5
vmacro03583 Vaccinium macrocarpon HOM05D005328 ORTHO05D006049 1.7e-20 102.1 63 84.1
Actinidia02271 Actinidia chinensis HOM05D005328 ORTHO05D006049 2.2e-20 101.7 63 82.5
CDE03G0050 Ceratophyllum demersum HOM05D005328 ORTHO05D006049 2.2e-20 101.7 63 82.5
CDE06G1717 Ceratophyllum demersum HOM05D005328 ORTHO05D006049 2.2e-20 101.7 63 82.5
Dinv04372 Davidia involucrata HOM05D005328 ORTHO05D006049 2.2e-20 101.7 63 82.5
Atru.chr1.2204 Acer truncatum HOM05D005328 ORTHO05D006049 2.9e-20 101.3 63 81.0
AagrBONN_evm.TU.Sc2ySwM_228.5016 Anthoceros agrestis HOM05D005328 ORTHO05D006049 2.9e-20 101.3 63 82.5
CAN.G2049.4 Capsicum annuum HOM05D005328 ORTHO05D006049 2.9e-20 101.3 63 81.0
DCAR_022839 Daucus carota HOM05D005328 ORTHO05D006049 2.9e-20 101.3 63 81.0
Solyc02g084340.3 Solanum lycopersicum HOM05D005328 ORTHO05D006049 2.9e-20 101.3 62 83.9
Sopen02g029040 Solanum pennellii HOM05D005328 ORTHO05D006049 2.9e-20 101.3 62 83.9
PGSC0003DMG400003630 Solanum tuberosum HOM05D005328 ORTHO05D006049 2.9e-20 101.3 62 83.9
SGA_v2.0_scaffold7G03648 Striga asiatica HOM05D005328 ORTHO05D006049 2.9e-20 101.3 63 79.4
TWI63G1825 Tripterygium wilfordii HOM05D005328 ORTHO05D006049 2.9e-20 101.3 63 82.5
Lj6g0010372 Lotus japonicus HOM05D005328 ORTHO05D006049 3.7e-20 100.9 63 81.0
Cpa.g.sc53.124 Carica papaya HOM05D005328 ORTHO05D006049 4.9e-20 100.5 63 81.0
CiPaw.10G085200 Carya illinoinensis HOM05D005328 ORTHO05D006049 4.9e-20 100.5 63 81.0
Peaxi162Scf00083g00091 Petunia axillaris HOM05D005328 ORTHO05D006049 4.9e-20 100.5 63 81.0
Potri.006G000200 Populus trichocarpa HOM05D005328 ORTHO05D006049 4.9e-20 100.5 63 81.0
Rhsim13G0137800 Rhododendron simsii HOM05D005328 ORTHO05D006049 4.9e-20 100.5 63 82.5
Sabra06G0000700 Salix brachista HOM05D005328 ORTHO05D006049 4.9e-20 100.5 63 81.0
Nn1g08402 Nelumbo nucifera HOM05D005328 ORTHO05D006049 6.4e-20 100.1 63 81.0
Nitab4.5_0002880g0010 Nicotiana tabacum HOM05D005328 ORTHO05D006049 6.4e-20 100.1 63 81.0
Nitab4.5_0005721g0030 Nicotiana tabacum HOM05D005328 ORTHO05D006049 6.4e-20 100.1 63 81.0
SEGI_06923 Sequoiadendron giganteum HOM05D005328 ORTHO05D006049 6.4e-20 100.1 63 79.4
HPP92_007484 Vanilla planifolia HOM05D005328 ORTHO05D006049 6.4e-20 100.1 63 81.0
CSS0022453 Camellia sinensis var. sinensis HOM05D005328 ORTHO05D006049 8.3e-20 99.8 63 81.0
ECA234G3238 Erigeron canadensis HOM05D005328 ORTHO05D006049 1.1e-19 99.4 63 79.4
Gohir.A02G007200 Gossypium hirsutum HOM05D005328 ORTHO05D006049 1.1e-19 99.4 63 81.0
Gohir.D02G007001 Gossypium hirsutum HOM05D005328 ORTHO05D006049 1.1e-19 99.4 63 81.0
Gorai.005G008200 Gossypium raimondii HOM05D005328 ORTHO05D006049 1.1e-19 99.4 63 81.0
Thecc.04G160200 Theobroma cacao HOM05D005328 ORTHO05D006049 1.1e-19 99.4 63 81.0
GSVIVG01018754001 Vitis vinifera HOM05D005328 ORTHO05D006049 1.1e-19 99.4 63 81.0
arahy.Tifrunner.gnm1.ann1.B05UD4 Arachis hypogaea HOM05D005328 ORTHO05D006049 1.4e-19 99.0 63 81.0
arahy.Tifrunner.gnm1.ann1.QMQM64 Arachis hypogaea HOM05D005328 ORTHO05D006049 1.4e-19 99.0 63 81.0
Ca_00786_v3 Cicer arietinum L. HOM05D005328 ORTHO05D006049 1.4e-19 99.0 63 79.4
Ca_11373_v3 Cicer arietinum L. HOM05D005328 ORTHO05D006049 1.4e-19 99.0 63 79.4
Ciclev10015350m.g Citrus clementina HOM05D005328 ORTHO05D006049 1.4e-19 99.0 63 79.4
Glyma.15G123900 Glycine max HOM05D005328 ORTHO05D006049 1.4e-19 99.0 63 79.4
MD04G1014200 Malus domestica HOM05D005328 ORTHO05D006049 1.4e-19 99.0 63 81.0
Manes.03G095600 Manihot esculenta HOM05D005328 ORTHO05D006049 1.4e-19 99.0 63 79.4
VMungo0540G0318 Vigna mungo HOM05D005328 ORTHO05D006049 1.4e-19 99.0 63 79.4
ClCG07G017100 Citrullus lanatus HOM05D005328 ORTHO05D006049 1.8e-19 98.6 63 77.8
Pp3c3_9980 Physcomitrium patens HOM05D005328 ORTHO05D006049 1.8e-19 98.6 63 79.4
Eucgr.E04239 Eucalyptus grandis HOM05D005328 ORTHO05D006049 2.4e-19 98.2 63 79.4
HanXRQChr17g0558521 Helianthus annuus HOM05D005328 ORTHO05D006049 2.4e-19 98.2 63 77.8
Hma1.2p1_0391F.1_g142830 Hydrangea macrophylla HOM05D005328 ORTHO05D006049 2.4e-19 98.2 63 79.4
Psat1g170800 Pisum sativum HOM05D005328 ORTHO05D006049 2.4e-19 98.2 63 77.8
PGR042G0801 Punica granatum HOM05D005328 ORTHO05D006049 2.4e-19 98.2 63 79.4
Sed0006700 Sechium edule HOM05D005328 ORTHO05D006049 2.4e-19 98.2 63 79.4
MELO3C017635.2 Cucumis melo HOM05D005328 ORTHO05D006049 3.2e-19 97.8 63 79.4
CsaV3_4G004310 Cucumis sativus L. HOM05D005328 ORTHO05D006049 3.2e-19 97.8 63 79.4
Glyma.09G018000 Glycine max HOM05D005328 ORTHO05D006049 3.2e-19 97.8 63 77.8
Phvul.006G134100 Phaseolus vulgaris HOM05D005328 ORTHO05D006049 3.2e-19 97.8 63 77.8
Prupe.1G161200 Prunus persica HOM05D005328 ORTHO05D006049 3.2e-19 97.8 63 79.4
SalBow8G1780 Salvia bowleyana HOM05D005328 ORTHO05D006049 3.2e-19 97.8 62 79.0
Ah.07g207330 Amaranthus hybridus HOM05D005328 ORTHO05D002024 4.1e-19 97.4 63 79.4
Cc09_g00040 Coffea canephora HOM05D005328 ORTHO05D006049 4.1e-19 97.4 62 80.6
RcHm_v2.0_Chr4g0414011 Rosa chinensis HOM05D005328 ORTHO05D006049 4.1e-19 97.4 63 79.4
Hund04726 Selenicereus undatus HOM05D005328 ORTHO05D006049 4.1e-19 97.4 63 79.4
TAR626G1462 Trochodendron aralioides HOM05D005328 ORTHO05D006049 4.1e-19 97.4 63 79.4
EL10Ac3g05669 Beta vulgaris HOM05D005328 ORTHO05D006049 5.4e-19 97.1 63 79.4
AUR62016005 Chenopodium quinoa HOM05D005328 ORTHO05D006049 5.4e-19 97.1 63 81.0
AUR62021212 Chenopodium quinoa HOM05D005328 ORTHO05D006049 5.4e-19 97.1 63 81.0
TPR.G10498 Trifolium pratense HOM05D005328 ORTHO05D006049 5.4e-19 97.1 63 77.8
Duzib151G0457 Durio zibethinus HOM05D005328 ORTHO05D006049 7.0e-19 96.7 62 80.6
Sc13g0008540 Simmondsia chinensis HOM05D005328 ORTHO05D006049 7.0e-19 96.7 63 79.4
COL.COLO4_12851 Corchorus olitorius HOM05D005328 ORTHO05D006049 9.2e-19 96.3 62 79.0
PSO017G7149 Papaver somniferum HOM05D005328 ORTHO05D006049 9.2e-19 96.3 63 76.2
PSO170G6444 Papaver somniferum HOM05D005328 ORTHO05D006049 9.2e-19 96.3 63 76.2
Migut.M01485 Erythranthe guttata HOM05D005328 ORTHO05D006049 1.6e-18 95.5 63 76.2
Thhalv10001457m.g Eutrema salsugineum HOM05D005328 ORTHO05D006049 1.6e-18 95.5 63 76.2
AL4G43160 Arabidopsis lyrata HOM05D005328 ORTHO05D006049 2.0e-18 95.1 63 74.6
AT2G44200 Arabidopsis thaliana HOM05D005328 ORTHO05D006049 2.0e-18 95.1 63 74.6
Carub.0004s2678 Capsella rubella HOM05D005328 ORTHO05D006049 2.0e-18 95.1 63 74.6
CARHR139360 Cardamine hirsuta HOM05D005328 ORTHO05D006049 2.0e-18 95.1 63 74.6
FvH4_4g13451 Fragaria vesca HOM05D005328 ORTHO05D006049 2.0e-18 95.1 63 76.2
FAN12G3626 Fragaria x ananassa HOM05D005328 ORTHO05D006049 2.0e-18 95.1 63 76.2
THA.LOC104798630 Tarenaya hassleriana HOM05D005328 ORTHO05D006049 2.0e-18 95.1 63 76.2
THA.LOC104804861 Tarenaya hassleriana HOM05D005328 ORTHO05D006049 2.0e-18 95.1 63 76.2
THA.LOC104807080 Tarenaya hassleriana HOM05D005328 ORTHO05D006049 2.0e-18 95.1 63 76.2
unitig_748.g7855 Utricularia gibba HOM05D005328 ORTHO05D006049 2.0e-18 95.1 62 75.8
FAN07G1972 Fragaria x ananassa HOM05D005328 ORTHO05D006049 2.7e-18 94.7 63 76.2
FAN17G2578 Fragaria x ananassa HOM05D005328 ORTHO05D006049 2.7e-18 94.7 63 76.2
FAN22G2230 Fragaria x ananassa HOM05D005328 ORTHO05D006049 2.7e-18 94.7 63 76.2
Medtr2g028200 Medicago truncatula HOM05D005328 ORTHO05D006049 3.5e-18 94.4 63 74.6
BcaC01g05181 Brassica carinata HOM05D005328 ORTHO05D006049 4.6e-18 94.0 63 74.6
C03p29470 Brassica napus HOM05D005328 ORTHO05D006049 4.6e-18 94.0 63 74.6
BraA03t11679Z Brassica rapa HOM05D005328 ORTHO05D006049 4.6e-18 94.0 63 74.6
BcaB02g08879 Brassica carinata HOM05D005328 ORTHO05D006049 5.9e-18 93.6 63 74.6
Lalb_Chr15g0088491 Lupinus albus HOM05D005328 ORTHO05D006049 5.9e-18 93.6 63 76.2
Sp4g26280 Schrenkiella parvula HOM05D005328 ORTHO05D006049 5.9e-18 93.6 63 74.6
Aa31LG1G25860 Aethionema arabicum HOM05D005328 ORTHO05D006049 7.8e-18 93.2 63 73.0
BcaB01g03324 Brassica carinata HOM05D005328 ORTHO05D006049 7.8e-18 93.2 63 73.0
BcaC02g12330 Brassica carinata HOM05D005328 ORTHO05D006049 7.8e-18 93.2 63 73.0
A03p24730 Brassica napus HOM05D005328 ORTHO05D006049 7.8e-18 93.2 63 73.0
C04p05070 Brassica napus HOM05D005328 ORTHO05D006049 7.8e-18 93.2 63 73.0
A05p04290 Brassica napus HOM05D005328 ORTHO05D006049 1.0e-17 92.8 63 73.0
BraA05t19414Z Brassica rapa HOM05D005328 ORTHO05D006049 1.0e-17 92.8 63 73.0
CBR_g2953 Chara braunii HOM05D005328 ORTHO05D006049 8.6e-17 89.7 63 73.0
Zm00001eb034090 Zea mays HOM05D005328 ORTHO05D006049 1.9e-16 88.6 63 71.4
Carub.0004s2677 Capsella rubella HOM05D005328 ORTHO05D006049 2.5e-16 88.2 63 68.3
Os08g0500200 Oryza sativa ssp. japonica HOM05D005328 ORTHO05D006049 6.2e-15 83.6 63 68.3
Mapoly0104s0032 Marchantia polymorpha HOM05D005328 ORTHO05D006049 1.4e-14 82.4 63 66.7
VMungo1383G0559 Vigna mungo HOM05D005328 ORTHO05D006049 3.1e-14 81.3 53 73.6
AT2G44195 Arabidopsis thaliana HOM05D005328 ORTHO05D006049 2.6e-13 78.2 63 63.5
AL4G43150 Arabidopsis lyrata HOM05D005328 ORTHO05D006049 8.3e-12 73.2 48 72.9
BolC3t15295H Brassica oleracea HOM05D005328 ORTHO05D006049 8.3e-12 73.2 50 70.0
Prupe.1G162300 Prunus persica HOM05D005328 ORTHO05D006049 5.4e-11 70.5 48 72.9
SMO114G0026 Selaginella moellendorffii HOM05D005328 ORTHO05D006049 6.2e-07 57.0 35 82.9


User provided reference genes

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