Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO235G0038 Selaginella moellendorffii HOM05D005088 ORTHO05D006914 9.3e-81 303.5 157 100.0
SMO347G0658 Selaginella moellendorffii HOM05D005088 ORTHO05D006914 6.5e-42 174.5 206 57.3
Manes.15G152700 Manihot esculenta HOM05D005088 ORTHO05D006914 9.2e-12 74.3 92 46.7
VMungo0464G1582 Vigna mungo HOM05D005088 ORTHO05D006914 2.0e-11 73.2 84 48.8
Dinv22813 Davidia involucrata HOM05D005088 ORTHO05D006914 2.7e-11 72.8 93 47.3
TAR371G0548 Trochodendron aralioides HOM05D005088 ORTHO05D006914 4.5e-11 72.0 93 47.3
ATR1136G111 Amborella trichopoda HOM05D005088 ORTHO05D006914 1.3e-10 70.5 94 43.6
CANSAT64G2170 Cannabis sativa HOM05D005088 ORTHO05D006914 1.3e-10 70.5 95 46.3
TAR629G0436 Trochodendron aralioides HOM05D005088 ORTHO05D006914 1.7e-10 70.1 93 44.1
Lalb_Chr06g0174471 Lupinus albus HOM05D005088 ORTHO05D006914 3.8e-10 68.9 85 47.1
Actinidia36135 Actinidia chinensis HOM05D005088 ORTHO05D006914 6.6e-10 68.2 93 46.2
PGR142G2056 Punica granatum HOM05D005088 ORTHO05D006914 6.6e-10 68.2 93 44.1
HanXRQChr04g0122711 Helianthus annuus HOM05D005088 ORTHO05D006914 8.6e-10 67.8 95 49.5
ECA236G2300 Erigeron canadensis HOM05D005088 ORTHO05D006914 1.1e-09 67.4 93 48.4
TWI63G0383 Tripterygium wilfordii HOM05D005088 ORTHO05D006914 1.1e-09 67.4 93 43.0
Ciclev10015979m.g Citrus clementina HOM05D005088 ORTHO05D006914 1.5e-09 67.0 93 46.2
Mapoly0020s0128 Marchantia polymorpha HOM05D005088 ORTHO05D006914 1.5e-09 67.0 99 44.4
CSS0015220 Camellia sinensis var. sinensis HOM05D005088 ORTHO05D006914 1.9e-09 66.6 94 46.8
Migut.H00031 Erythranthe guttata HOM05D005088 ORTHO05D006914 1.9e-09 66.6 83 48.2
Gohir.A07G224400 Gossypium hirsutum HOM05D005088 ORTHO05D006914 1.9e-09 66.6 91 44.0
Lsat_1_v5_gn_7_9521 Lactuca sativa HOM05D005088 ORTHO05D006914 2.5e-09 66.2 90 46.7
Phvul.004G060300 Phaseolus vulgaris HOM05D005088 ORTHO05D006914 2.5e-09 66.2 84 47.6
PSO782G2229 Papaver somniferum HOM05D005088 ORTHO05D006914 3.3e-09 65.9 135 37.8
Sed0009164 Sechium edule HOM05D005088 ORTHO05D006914 3.3e-09 65.9 93 41.9
TWI73G1260 Tripterygium wilfordii HOM05D005088 ORTHO05D006914 3.3e-09 65.9 93 44.1
CsaV3_5G026950 Cucumis sativus L. HOM05D005088 ORTHO05D006914 4.3e-09 65.5 93 45.2
Nn2g12382 Nelumbo nucifera HOM05D005088 ORTHO05D006914 4.3e-09 65.5 94 42.6
Oeu013966.1 Olea europaea HOM05D005088 ORTHO05D006914 4.3e-09 65.5 84 50.0
COL.COLO4_29189 Corchorus olitorius HOM05D005088 ORTHO05D006914 5.6e-09 65.1 93 44.1
Glyma.05G115100 Glycine max HOM05D005088 ORTHO05D006914 5.6e-09 65.1 85 44.7
Glyma.19G052200 Glycine max HOM05D005088 ORTHO05D006914 5.6e-09 65.1 85 44.7
Gohir.D07G231700 Gossypium hirsutum HOM05D005088 ORTHO05D006914 5.6e-09 65.1 93 41.9
PSO754G0075 Papaver somniferum HOM05D005088 ORTHO05D006914 5.6e-09 65.1 94 44.7
Haze_14769 Corylus avellana HOM05D005088 ORTHO05D006914 7.3e-09 64.7 94 43.6
Duzib147G1185 Durio zibethinus HOM05D005088 ORTHO05D006914 7.3e-09 64.7 91 40.7
PSO063G5784 Papaver somniferum HOM05D005088 ORTHO05D006914 7.3e-09 64.7 94 43.6
Thecc.04G021300 Theobroma cacao HOM05D005088 ORTHO05D006914 7.3e-09 64.7 91 40.7
arahy.Tifrunner.gnm1.ann1.NBA2EB Arachis hypogaea HOM05D005088 ORTHO05D006914 9.5e-09 64.3 85 44.7
Sopen01g054060 Solanum pennellii HOM05D005088 ORTHO05D006914 9.5e-09 64.3 93 43.0
Solyc10g008130.3 Solanum lycopersicum HOM05D005088 ORTHO05D006914 1.2e-08 63.9 93 43.0
Sopen10g004000 Solanum pennellii HOM05D005088 ORTHO05D006914 1.2e-08 63.9 93 43.0
PGSC0003DMG400010550 Solanum tuberosum HOM05D005088 ORTHO05D006914 1.2e-08 63.9 93 43.0
PGSC0003DMG400021851 Solanum tuberosum HOM05D005088 ORTHO05D006914 1.2e-08 63.9 93 43.0
Atru.chr6.2443 Acer truncatum HOM05D005088 ORTHO05D006914 1.6e-08 63.5 94 44.7
CANSAT64G1390 Cannabis sativa HOM05D005088 ORTHO05D006914 2.1e-08 63.2 95 42.1
Solyc01g112010.3 Solanum lycopersicum HOM05D005088 ORTHO05D006914 2.1e-08 63.2 93 41.9
Nitab4.5_0006478g0030 Nicotiana tabacum HOM05D005088 ORTHO05D006914 2.8e-08 62.8 93 41.9
Potri.001G341300 Populus trichocarpa HOM05D005088 ORTHO05D006914 2.8e-08 62.8 92 43.5
QL02p073814 Quercus lobata HOM05D005088 ORTHO05D006914 2.8e-08 62.8 96 42.7
SEGI_26999 Sequoiadendron giganteum HOM05D005088 ORTHO05D006914 2.8e-08 62.8 94 42.6
GSVIVG01008659001 Vitis vinifera HOM05D005088 ORTHO05D006914 2.8e-08 62.8 93 40.9
Gorai.001G266900 Gossypium raimondii HOM05D005088 ORTHO05D006914 4.7e-08 62.0 90 42.2
MD17G1021200 Malus domestica HOM05D005088 ORTHO05D006914 4.7e-08 62.0 94 42.6
RhsimUnG0006300 Rhododendron simsii HOM05D005088 ORTHO05D006914 8.0e-08 61.2 93 43.0
RhsimUnG0087300 Rhododendron simsii HOM05D005088 ORTHO05D006914 8.0e-08 61.2 93 43.0
ClCG09G019430 Citrullus lanatus HOM05D005088 ORTHO05D006914 1.0e-07 60.8 91 45.1
Pp3c15_21890 Physcomitrium patens HOM05D005088 ORTHO05D006914 1.0e-07 60.8 99 40.4
Nitab4.5_0001562g0080 Nicotiana tabacum HOM05D005088 ORTHO05D006914 1.4e-07 60.5 92 41.3
SalBow8G2200 Salvia bowleyana HOM05D005088 ORTHO05D006914 1.4e-07 60.5 83 44.6
arahy.Tifrunner.gnm1.ann1.XI631Y Arachis hypogaea HOM05D005088 ORTHO05D006914 1.8e-07 60.1 81 43.2
Psat1g081640 Pisum sativum HOM05D005088 ORTHO05D006914 1.8e-07 60.1 85 41.2
Psat5g064920 Pisum sativum HOM05D005088 ORTHO05D006914 1.8e-07 60.1 85 41.2
SalBow4G2808 Salvia bowleyana HOM05D005088 ORTHO05D006914 1.8e-07 60.1 83 44.6
MD09G1021000 Malus domestica HOM05D005088 ORTHO05D006914 2.3e-07 59.7 96 40.6
Sabra16G0221300 Salix brachista HOM05D005088 ORTHO05D006914 2.3e-07 59.7 153 32.0
CBR_g229 Chara braunii HOM05D005088 ORTHO05D006914 4.0e-07 58.9 104 36.5
Nitab4.5_0006683g0110 Nicotiana tabacum HOM05D005088 ORTHO05D006914 4.0e-07 58.9 91 40.7
Peaxi162Scf00420g00135 Petunia axillaris HOM05D005088 ORTHO05D006914 4.0e-07 58.9 93 41.9
unitig_748.g6973 Utricularia gibba HOM05D005088 ORTHO05D006914 4.0e-07 58.9 84 42.9
vmacro05886 Vaccinium macrocarpon HOM05D005088 ORTHO05D006914 6.8e-07 58.2 92 42.4
SHI10481 Sapria himalayana HOM05D005088 ORTHO05D006914 1.2e-06 57.4 88 44.3
Prupe.3G295300 Prunus persica HOM05D005088 ORTHO05D006914 2.0e-06 56.6 124 34.7
EL10Ac6g15396 Beta vulgaris HOM05D005088 ORTHO05D006914 2.6e-06 56.2 99 36.4
CiPaw.03G046700 Carya illinoinensis HOM05D005088 ORTHO05D006914 2.6e-06 56.2 93 40.9
Nitab4.5_0001357g0120 Nicotiana tabacum HOM05D005088 ORTHO05D006914 2.6e-06 56.2 91 39.6
THA.LOC104820717 Tarenaya hassleriana HOM05D005088 ORTHO05D006914 2.6e-06 56.2 92 41.3
CDE02G1254 Ceratophyllum demersum HOM05D005088 ORTHO05D006914 3.4e-06 55.8 95 40.0
Medtr6g021760 Medicago truncatula HOM05D005088 ORTHO05D006914 3.4e-06 55.8 64 46.9
MELO3C021598.2 Cucumis melo HOM05D005088 ORTHO05D006914 5.8e-06 55.1 89 43.8
Cre06.g264500 Chlamydomonas reinhardtii HOM05D005088 ORTHO05D006914 7.5e-06 54.7 42 64.3
RcHm_v2.0_Chr2g0173471 Rosa chinensis HOM05D005088 ORTHO05D006914 7.5e-06 54.7 92 40.2


User provided reference genes

Program Settings