Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO222G0004 Selaginella moellendorffii HOM05D002705 ORTHO05D004955 0.0e+00 1288.9 692 100.0
SMO118G0216 Selaginella moellendorffii HOM05D002705 ORTHO05D004955 1.6e-145 520.8 611 61.5
SMO118G0423 Selaginella moellendorffii HOM05D002705 ORTHO05D004955 8.0e-76 289.3 407 47.9
SMO263G0015 Selaginella moellendorffii HOM05D002705 ORTHO05D004955 2.3e-75 287.7 409 47.9
SMO118G0116 Selaginella moellendorffii HOM05D002705 ORTHO05D004955 3.7e-65 253.8 283 57.6
Pp3c1_29170 Physcomitrium patens HOM05D002705 ORTHO05D004955 1.2e-39 169.1 181 50.3
Mapoly0067s0049 Marchantia polymorpha HOM05D002705 ORTHO05D004955 2.3e-38 164.9 158 55.1
COL.COLO4_37311 Corchorus olitorius HOM05D002705 ORTHO05D004955 3.6e-36 157.5 369 33.9
RcHm_v2.0_Chr1g0373301 Rosa chinensis HOM05D002705 ORTHO05D004955 3.6e-36 157.5 155 55.5
Solyc03g093850.2 Solanum lycopersicum HOM05D002705 ORTHO05D004955 4.7e-36 157.1 157 54.1
Migut.F01210 Erythranthe guttata HOM05D002705 ORTHO05D004955 6.2e-36 156.8 157 53.5
FvH4_7g26710 Fragaria vesca HOM05D002705 ORTHO05D004955 1.8e-35 155.2 155 55.5
FAN06G0843 Fragaria x ananassa HOM05D002705 ORTHO05D004955 1.8e-35 155.2 155 55.5
Sopen03g024730 Solanum pennellii HOM05D002705 ORTHO05D004955 1.8e-35 155.2 157 53.5
Rhsim03G0158700 Rhododendron simsii HOM05D002705 ORTHO05D004955 2.4e-35 154.8 157 54.1
CANSAT56G1220 Cannabis sativa HOM05D002705 ORTHO05D004955 5.2e-35 153.7 157 50.3
Sabra12G0083000 Salix brachista HOM05D002705 ORTHO05D004955 6.8e-35 153.3 204 46.1
GSVIVG01013853001 Vitis vinifera HOM05D002705 ORTHO05D004955 6.8e-35 153.3 157 51.6
MSTRG.8400 Avicennia marina HOM05D002705 ORTHO05D004955 8.9e-35 152.9 157 51.6
Cc00_g24340 Coffea canephora HOM05D002705 ORTHO05D004955 2.0e-34 151.8 157 51.6
Potri.012G114100 Populus trichocarpa HOM05D002705 ORTHO05D004955 2.0e-34 151.8 157 52.9
QL09p027408 Quercus lobata HOM05D002705 ORTHO05D004955 2.0e-34 151.8 157 52.9
FAN03G2179 Fragaria x ananassa HOM05D002705 ORTHO05D004955 2.6e-34 151.4 155 54.8
SalBow2G1886 Salvia bowleyana HOM05D002705 ORTHO05D004955 2.6e-34 151.4 157 51.6
Nn1g00769 Nelumbo nucifera HOM05D002705 ORTHO05D004955 3.4e-34 151.0 157 51.6
Sc11g0004220 Simmondsia chinensis HOM05D002705 ORTHO05D004955 3.4e-34 151.0 147 54.4
MD07G1244800 Malus domestica HOM05D002705 ORTHO05D004955 4.4e-34 150.6 155 51.6
THA.LOC104825051 Tarenaya hassleriana HOM05D002705 ORTHO05D004955 4.4e-34 150.6 157 48.4
Cfa013602 Carpinus fangiana HOM05D002705 ORTHO05D004955 5.8e-34 150.2 157 51.0
Haze_22224 Corylus avellana HOM05D002705 ORTHO05D004955 5.8e-34 150.2 157 49.7
ECA232G4016 Erigeron canadensis HOM05D002705 ORTHO05D004955 5.8e-34 150.2 157 51.0
Prupe.2G270600 Prunus persica HOM05D002705 ORTHO05D004955 5.8e-34 150.2 155 52.3
vmacro06848 Vaccinium macrocarpon HOM05D002705 ORTHO05D004955 5.8e-34 150.2 163 52.8
Lsat_1_v5_gn_0_9880 Lactuca sativa HOM05D002705 ORTHO05D004955 9.9e-34 149.4 157 52.2
MD07G1245700 Malus domestica HOM05D002705 ORTHO05D004955 9.9e-34 149.4 155 51.0
CiPaw.07G183200 Carya illinoinensis HOM05D002705 ORTHO05D004955 1.3e-33 149.1 157 51.6
Oeu044165.1 Olea europaea HOM05D002705 ORTHO05D004955 1.3e-33 149.1 157 53.5
PGR142G4199 Punica granatum HOM05D002705 ORTHO05D004955 1.3e-33 149.1 157 51.6
SGA_v2.0_scaffold352G49687 Striga asiatica HOM05D002705 ORTHO05D004955 1.3e-33 149.1 158 52.5
Lj8C49G2 Lonicera japonica HOM05D002705 ORTHO05D004955 1.7e-33 148.7 157 49.7
arahy.Tifrunner.gnm1.ann1.WYM0Y2 Arachis hypogaea HOM05D002705 ORTHO05D004955 2.2e-33 148.3 185 46.5
CAN.G1406.2 Capsicum annuum HOM05D002705 ORTHO05D004955 2.2e-33 148.3 157 52.2
Nitab4.5_0000103g0340 Nicotiana tabacum HOM05D002705 ORTHO05D004955 2.2e-33 148.3 157 50.3
Peaxi162Scf00073g01729 Petunia axillaris HOM05D002705 ORTHO05D004955 2.2e-33 148.3 157 50.3
arahy.Tifrunner.gnm1.ann1.ZG0SUW Arachis hypogaea HOM05D002705 ORTHO05D004955 2.9e-33 147.9 185 46.5
Carub.0007s1591 Capsella rubella HOM05D002705 ORTHO05D004955 2.9e-33 147.9 157 47.8
TPR.G18561 Trifolium pratense HOM05D002705 ORTHO05D004955 2.9e-33 147.9 161 50.9
CAN.G1654.1 Capsicum annuum HOM05D002705 ORTHO05D004955 4.9e-33 147.1 157 52.2
CAN.G408.1 Capsicum annuum HOM05D002705 ORTHO05D004955 4.9e-33 147.1 157 51.6
MD07G1244300 Malus domestica HOM05D002705 ORTHO05D004955 6.4e-33 146.7 156 51.3
Actinidia13623 Actinidia chinensis HOM05D002705 ORTHO05D004955 8.4e-33 146.4 157 51.0
CARHR232510 Cardamine hirsuta HOM05D002705 ORTHO05D004955 8.4e-33 146.4 157 47.8
Manes.14G040900 Manihot esculenta HOM05D002705 ORTHO05D004955 8.4e-33 146.4 158 48.7
Nitab4.5_0010058g0010 Nicotiana tabacum HOM05D002705 ORTHO05D004955 8.4e-33 146.4 157 50.3
BcaC06g32837 Brassica carinata HOM05D002705 ORTHO05D004955 1.1e-32 146.0 157 47.8
FAN10G0038 Fragaria x ananassa HOM05D002705 ORTHO05D004955 1.1e-32 146.0 178 48.3
PSO675G1384 Papaver somniferum HOM05D002705 ORTHO05D004955 1.1e-32 146.0 157 51.0
Psat6g140240 Pisum sativum HOM05D002705 ORTHO05D004955 1.4e-32 145.6 157 51.0
Atru.chr6.1980 Acer truncatum HOM05D002705 ORTHO05D004955 1.9e-32 145.2 159 50.3
Atru.chr6.2006 Acer truncatum HOM05D002705 ORTHO05D004955 1.9e-32 145.2 159 50.3
AT4G25120 Arabidopsis thaliana HOM05D002705 ORTHO05D004955 1.9e-32 145.2 157 47.1
HanXRQChr15g0493601 Helianthus annuus HOM05D002705 ORTHO05D004955 1.9e-32 145.2 147 51.7
Lalb_Chr06g0169611 Lupinus albus HOM05D002705 ORTHO05D004955 1.9e-32 145.2 157 50.3
Aa31LG7G10510 Aethionema arabicum HOM05D002705 ORTHO05D004955 2.4e-32 144.8 157 47.1
AL7G28030 Arabidopsis lyrata HOM05D002705 ORTHO05D004955 2.4e-32 144.8 157 47.1
Cpa.g.sc13.232 Carica papaya HOM05D002705 ORTHO05D004955 2.4e-32 144.8 157 51.0
Glyma.20G198400 Glycine max HOM05D002705 ORTHO05D004955 2.4e-32 144.8 157 49.7
Thecc.03G145700 Theobroma cacao HOM05D002705 ORTHO05D004955 2.4e-32 144.8 157 49.0
Aqoxy7G00864 Aquilegia oxysepala HOM05D002705 ORTHO05D004955 3.2e-32 144.4 157 49.0
Gohir.D09G249500 Gossypium hirsutum HOM05D002705 ORTHO05D004955 3.2e-32 144.4 157 49.0
Gorai.006G273800 Gossypium raimondii HOM05D002705 ORTHO05D004955 3.2e-32 144.4 157 49.0
Sp7g23120 Schrenkiella parvula HOM05D002705 ORTHO05D004955 3.2e-32 144.4 157 47.1
Hma1.2p1_2119F.1_g314370 Hydrangea macrophylla HOM05D002705 ORTHO05D004955 4.1e-32 144.1 157 51.0
Ciclev10033740m.g Citrus clementina HOM05D002705 ORTHO05D004955 5.4e-32 143.7 157 49.0
Gohir.A09G248500 Gossypium hirsutum HOM05D002705 ORTHO05D004955 5.4e-32 143.7 157 48.4
Dinv34540 Davidia involucrata HOM05D002705 ORTHO05D004955 7.1e-32 143.3 157 50.3
Lj5g0005183 Lotus japonicus HOM05D002705 ORTHO05D004955 7.1e-32 143.3 157 50.3
TAR636G2282 Trochodendron aralioides HOM05D002705 ORTHO05D004955 7.1e-32 143.3 157 51.0
MELO3C005443.2 Cucumis melo HOM05D002705 ORTHO05D004955 2.7e-31 141.4 155 49.7
DCAR_014643 Daucus carota HOM05D002705 ORTHO05D004955 2.7e-31 141.4 154 51.3
MD07G1241600 Malus domestica HOM05D002705 ORTHO05D004955 4.6e-31 140.6 167 47.3
Medtr1g072800 Medicago truncatula HOM05D002705 ORTHO05D004955 4.6e-31 140.6 161 47.8
EL10As1g23078 Beta vulgaris HOM05D002705 ORTHO05D004955 6.0e-31 140.2 170 45.3
BraA03t14645Z Brassica rapa HOM05D002705 ORTHO05D004955 6.0e-31 140.2 383 30.5
MD07G1243100 Malus domestica HOM05D002705 ORTHO05D004955 6.0e-31 140.2 167 47.3
Phvul.L001885 Phaseolus vulgaris HOM05D002705 ORTHO05D004955 7.8e-31 139.8 157 50.3
Thhalv10024258m.g Eutrema salsugineum HOM05D002705 ORTHO05D004955 1.0e-30 139.4 157 47.1
HPP92_003517 Vanilla planifolia HOM05D002705 ORTHO05D004955 1.0e-30 139.4 154 48.7
ClCG01G004930 Citrullus lanatus HOM05D002705 ORTHO05D004955 1.3e-30 139.0 155 49.0
Eucgr.K00116 Eucalyptus grandis HOM05D002705 ORTHO05D004955 1.3e-30 139.0 154 49.4
Os07g0492100 Oryza sativa ssp. japonica HOM05D002705 ORTHO05D004955 1.3e-30 139.0 158 47.5
CsaV3_5G005160 Cucumis sativus L. HOM05D002705 ORTHO05D004955 1.7e-30 138.7 155 46.5
ATR0665G329 Amborella trichopoda HOM05D002705 ORTHO05D004955 2.3e-30 138.3 158 50.6
Ca_09785_v3 Cicer arietinum L. HOM05D002705 ORTHO05D004955 2.3e-30 138.3 163 50.9
Ah.02g115400 Amaranthus hybridus HOM05D002705 ORTHO05D004955 1.1e-29 136.0 154 47.4
A03p55770 Brassica napus HOM05D002705 ORTHO05D004955 1.9e-29 135.2 144 49.3
Sed0003657 Sechium edule HOM05D002705 ORTHO05D004955 2.5e-29 134.8 155 45.8
TWI39G0103 Tripterygium wilfordii HOM05D002705 ORTHO05D004955 3.3e-29 134.4 154 50.0
C07p54050 Brassica napus HOM05D002705 ORTHO05D004955 4.3e-29 134.0 383 30.5
BolC7t45891H Brassica oleracea HOM05D002705 ORTHO05D004955 4.3e-29 134.0 383 30.5
AagrBONN_evm.TU.Sc2ySwM_117.709 Anthoceros agrestis HOM05D002705 ORTHO05D004955 1.1e-27 129.4 158 48.1
FAN01G0508 Fragaria x ananassa HOM05D002705 ORTHO05D004955 1.8e-27 128.6 152 51.3
Hma1.2p1_2119F.1_g314360 Hydrangea macrophylla HOM05D002705 ORTHO05D004955 2.6e-26 124.8 196 40.8
unitig_578.g16613 Utricularia gibba HOM05D002705 ORTHO05D004955 3.4e-26 124.4 132 50.8
CSS0042603 Camellia sinensis var. sinensis HOM05D002705 ORTHO05D004955 3.8e-25 120.9 163 45.4
CBR_g55304 Chara braunii HOM05D002705 ORTHO05D004955 6.4e-25 120.2 144 47.9
AagrBONN_evm.TU.Sc2ySwM_340.578 Anthoceros agrestis HOM05D002705 ORTHO05D004955 9.6e-21 106.3 158 41.8
MD07G1245200 Malus domestica HOM05D002705 ORTHO05D004955 3.0e-14 84.7 94 47.9
SEGI_07071 Sequoiadendron giganteum HOM05D002705 ORTHO05D004955 4.5e-10 70.9 48 70.8
Peaxi162Scf00073g01730 Petunia axillaris HOM05D002705 ORTHO05D004955 1.7e-09 68.9 47 72.3
SEGI_26843 Sequoiadendron giganteum HOM05D002705 ORTHO05D004955 4.9e-09 67.4 46 71.7
MD07G1241700 Malus domestica HOM05D002705 ORTHO05D004955 6.4e-09 67.0 48 70.8
MD07G1243600 Malus domestica HOM05D002705 ORTHO05D004955 6.4e-09 67.0 48 70.8
CBR_g46888 Chara braunii HOM05D002705 ORTHO05D004955 1.4e-08 65.9 46 69.6
AUR62042388 Chenopodium quinoa HOM05D002705 ORTHO05D004955 1.4e-08 65.9 46 71.7
FAN01G1045 Fragaria x ananassa HOM05D002705 ORTHO05D004955 1.4e-08 65.9 48 68.8
FAN05G3181 Fragaria x ananassa HOM05D002705 ORTHO05D004955 1.4e-08 65.9 48 68.8
FAN17G2187 Fragaria x ananassa HOM05D002705 ORTHO05D004955 1.4e-08 65.9 48 68.8
VMungo0720G0654 Vigna mungo HOM05D002705 ORTHO05D004955 3.2e-08 64.7 56 57.1
Lsat_1_v5_gn_5_183700 Lactuca sativa HOM05D002705 ORTHO05D021366 6.0e-07 60.5 46 67.4


User provided reference genes

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