Gene: Solyc03g093850.2

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc03g093850.2
  • Transcript Identifier Solyc03g093850.2.1
  • Gene Type Coding gene
  • Location SL4.0ch03 : 50072512-50084066 : negative

Gene Family Information

  • ID HOM05D002705
  • #Genes/#Species 254/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc03g093850.2.1
  • uniprot A0A3Q7FNW0
  • gene_id Solyc03g093850

Descriptions

  • Description ATP-dependent DNA helicase SRS2-like protein (AHRD V3.3 *** A0A2G2X4T1_CAPBA)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0032508
IEA
GOA DatabaseDNA duplex unwinding
GO:0000725
IBA
GOA Databaserecombinational repair
GO:0006310
ISO
PLAZA Integrative OrthologyDNA recombination AT4G25120
GO:0036292
ISO
PLAZA Integrative OrthologyDNA rewinding AT4G25120

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005524
IEA
GOA DatabaseATP binding
GO:0005524
IEA
InterProATP binding
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003677
IEA
InterProDNA binding
GO:0003678
IEA
GOA DatabaseDNA helicase activity
GO:0003678
IEA
InterProDNA helicase activity
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0016787
IEA
InterProhydrolase activity
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0004386
IEA
GOA Databasehelicase activity
GO:0043138
IBA
GOA Database3'-5' DNA helicase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IBA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR014016 UvrD-like helicase, ATP-binding domain
IPR000212 DNA helicase, UvrD/REP type
IPR013986 DExx box DNA helicase domain superfamily
IPR014017 UvrD-like DNA helicase, C-terminal
Mapman id Description
35.1 not assigned.annotated