Gene: Lsat_1_v5_gn_5_183700

General Information

Structural Information

  • Species Lactuca sativa
  • Gene Identifier Lsat_1_v5_gn_5_183700
  • Transcript Identifier Lsat_1_v5_gn_5_183700.1
  • Gene Type Coding gene
  • Location Lsat_1_v8_lg_5 : 327645636-327648312 : negative

Gene Family Information

  • ID HOM05D002705
  • #Genes/#Species 254/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Lsat_1_v5_gn_5_183700.v5
  • pacid 38969091

Descriptions

  • Description PF00580//PF05190 - UvrD/REP helicase N-terminal domain (UvrD-helicase) // MutS family domain IV (MutS_IV)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006298
IEA
InterPromismatch repair

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005524
IEA
InterProATP binding
GO:0030983
IEA
InterPromismatched DNA binding
GO:0003677
ISO
PLAZA Homology (enrichment)DNA binding HOM05D002705
GO:0003678
ISO
PLAZA Homology (enrichment)DNA helicase activity HOM05D002705
GO:0016787
ISO
PLAZA Homology (enrichment)hydrolase activity HOM05D002705

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR007861 DNA mismatch repair protein MutS, clamp
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR045076 DNA mismatch repair MutS family
IPR014016 UvrD-like helicase, ATP-binding domain
Mapman id Description
35.1 not assigned.annotated