Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO203G0150 Selaginella moellendorffii HOM05D005128 ORTHO05D006227 1.5e-74 282.7 143 100.0
ATR0057G123 Amborella trichopoda HOM05D005128 ORTHO05D006227 1.3e-49 199.9 123 77.2
Mapoly0006s0266 Marchantia polymorpha HOM05D005128 ORTHO05D006227 3.2e-48 195.3 143 65.0
AagrBONN_evm.TU.Sc2ySwM_369.249 Anthoceros agrestis HOM05D005128 ORTHO05D006227 5.5e-48 194.5 143 65.0
MBI04_g34109_MAGBIO Magnolia biondii HOM05D005128 ORTHO05D006227 2.1e-47 192.6 123 72.4
Nn6g33850 Nelumbo nucifera HOM05D005128 ORTHO05D006227 2.7e-47 192.2 123 72.4
TWI14G0708 Tripterygium wilfordii HOM05D005128 ORTHO05D006227 2.7e-47 192.2 123 73.2
TWI14G1050 Tripterygium wilfordii HOM05D005128 ORTHO05D006227 2.7e-47 192.2 123 73.2
Eucgr.E01576 Eucalyptus grandis HOM05D005128 ORTHO05D006227 4.7e-47 191.4 123 71.5
ClCG11G006910 Citrullus lanatus HOM05D005128 ORTHO05D006227 6.1e-47 191.0 123 72.4
Potri.002G136500 Populus trichocarpa HOM05D005128 ORTHO05D006227 8.0e-47 190.7 123 72.4
MELO3C008212.2 Cucumis melo HOM05D005128 ORTHO05D006227 1.4e-46 189.9 123 71.5
Sed0016496 Sechium edule HOM05D005128 ORTHO05D006227 1.4e-46 189.9 133 68.4
Potri.014G045200 Populus trichocarpa HOM05D005128 ORTHO05D006227 1.8e-46 189.5 123 71.5
FvH4_7g09830 Fragaria vesca HOM05D005128 ORTHO05D006227 3.0e-46 188.7 123 70.7
FAN03G0006 Fragaria x ananassa HOM05D005128 ORTHO05D006227 3.0e-46 188.7 123 70.7
FAN10G0506 Fragaria x ananassa HOM05D005128 ORTHO05D006227 3.0e-46 188.7 123 70.7
FAN10G2714 Fragaria x ananassa HOM05D005128 ORTHO05D006227 3.0e-46 188.7 123 70.7
PSO782G3280 Papaver somniferum HOM05D005128 ORTHO05D006227 3.0e-46 188.7 123 70.7
RcHm_v2.0_Chr1g0346991 Rosa chinensis HOM05D005128 ORTHO05D006227 3.0e-46 188.7 123 70.7
CSS0048126 Camellia sinensis var. sinensis HOM05D005128 ORTHO05D006227 4.0e-46 188.3 123 70.7
Cc02_g24910 Coffea canephora HOM05D005128 ORTHO05D006227 4.0e-46 188.3 123 70.7
COL.COLO4_12428 Corchorus olitorius HOM05D005128 ORTHO05D006227 4.0e-46 188.3 123 70.7
Thecc.01G392500 Theobroma cacao HOM05D005128 ORTHO05D006227 4.0e-46 188.3 123 70.7
GSVIVG01018248001 Vitis vinifera HOM05D005128 ORTHO05D006227 4.0e-46 188.3 123 70.7
Cpa.g.sc101.28 Carica papaya HOM05D005128 ORTHO05D006227 5.2e-46 188.0 123 70.7
Nitab4.5_0002874g0020 Nicotiana tabacum HOM05D005128 ORTHO05D006227 5.2e-46 188.0 123 70.7
Nitab4.5_0003553g0110 Nicotiana tabacum HOM05D005128 ORTHO05D006227 5.2e-46 188.0 123 70.7
Atru.chr5.161 Acer truncatum HOM05D005128 ORTHO05D006227 6.8e-46 187.6 123 69.9
CsaV3_6G001140 Cucumis sativus L. HOM05D005128 ORTHO05D006227 6.8e-46 187.6 123 70.7
ECA234G3101 Erigeron canadensis HOM05D005128 ORTHO05D006227 6.8e-46 187.6 123 70.7
CAN.G362.11 Capsicum annuum HOM05D005128 ORTHO05D006227 1.2e-45 186.8 123 69.1
Duzib138G0976 Durio zibethinus HOM05D005128 ORTHO05D006227 1.2e-45 186.8 123 69.9
FAN06G2910 Fragaria x ananassa HOM05D005128 ORTHO05D006227 1.2e-45 186.8 120 70.8
HanXRQChr05g0138471 Helianthus annuus HOM05D005128 ORTHO05D006227 1.2e-45 186.8 123 70.7
Peaxi162Scf00030g00515 Petunia axillaris HOM05D005128 ORTHO05D006227 1.2e-45 186.8 123 69.9
PGR042G1446 Punica granatum HOM05D005128 ORTHO05D006227 1.2e-45 186.8 123 69.9
TWI59G1443 Tripterygium wilfordii HOM05D005128 ORTHO05D006227 1.2e-45 186.8 123 69.9
TAR374G1117 Trochodendron aralioides HOM05D005128 ORTHO05D006227 1.2e-45 186.8 123 69.9
Manes.05G053000 Manihot esculenta HOM05D005128 ORTHO05D006227 1.5e-45 186.4 128 68.0
Solyc01g090450.3 Solanum lycopersicum HOM05D005128 ORTHO05D006227 1.5e-45 186.4 123 69.9
CiPaw.13G027900 Carya illinoinensis HOM05D005128 ORTHO05D006227 2.0e-45 186.0 123 69.9
Ciclev10029559m.g Citrus clementina HOM05D005128 ORTHO05D006227 2.0e-45 186.0 123 69.9
Manes.01G272200 Manihot esculenta HOM05D005128 ORTHO05D006227 2.0e-45 186.0 123 69.1
Aqoxy3G02773 Aquilegia oxysepala HOM05D005128 ORTHO05D006227 2.6e-45 185.7 123 69.9
PSO063G1454 Papaver somniferum HOM05D005128 ORTHO05D006227 2.6e-45 185.7 123 69.9
Sopen01g036240 Solanum pennellii HOM05D005128 ORTHO05D006227 2.6e-45 185.7 123 69.9
FAN06G2047 Fragaria x ananassa HOM05D005128 ORTHO05D006227 3.4e-45 185.3 123 69.9
Lsat_1_v5_gn_4_46700 Lactuca sativa HOM05D005128 ORTHO05D006227 3.4e-45 185.3 123 69.9
MD02G1216700 Malus domestica HOM05D005128 ORTHO05D006227 3.4e-45 185.3 123 69.9
vmacro13485 Vaccinium macrocarpon HOM05D005128 ORTHO05D006227 3.4e-45 185.3 123 68.3
Actinidia40389 Actinidia chinensis HOM05D005128 ORTHO05D006227 4.4e-45 184.9 123 68.3
Prupe.2G127400 Prunus persica HOM05D005128 ORTHO05D006227 7.5e-45 184.1 123 69.1
SGA_v2.0_scaffold52G19215 Striga asiatica HOM05D005128 ORTHO05D006227 7.5e-45 184.1 123 69.1
QL04p030930 Quercus lobata HOM05D005128 ORTHO05D006227 9.8e-45 183.7 122 69.7
Zm00001eb201920 Zea mays HOM05D005128 ORTHO05D006227 9.8e-45 183.7 131 64.9
Migut.A00726 Erythranthe guttata HOM05D005128 ORTHO05D006227 1.7e-44 183.0 123 68.3
Os11g0557900 Oryza sativa ssp. japonica HOM05D005128 ORTHO05D006227 2.2e-44 182.6 131 64.1
MSTRG.20701 Avicennia marina HOM05D005128 ORTHO05D006227 3.7e-44 181.8 123 67.5
Cfa011089 Carpinus fangiana HOM05D005128 ORTHO05D006227 4.8e-44 181.4 123 68.3
CDE11G0478 Ceratophyllum demersum HOM05D005128 ORTHO05D006227 4.8e-44 181.4 123 68.3
HPP92_009947 Vanilla planifolia HOM05D005379 ORTHO05D006227 4.8e-44 181.4 130 65.4
Gohir.D12G099300 Gossypium hirsutum HOM05D005128 ORTHO05D006227 6.3e-44 181.0 123 68.3
Gorai.008G108000 Gossypium raimondii HOM05D005128 ORTHO05D006227 6.3e-44 181.0 123 68.3
Gohir.A12G096500 Gossypium hirsutum HOM05D005128 ORTHO05D006227 8.3e-44 180.6 123 67.5
unitig_0.g1324 Utricularia gibba HOM05D005128 ORTHO05D006227 1.1e-43 180.3 132 65.2
Migut.B01551 Erythranthe guttata HOM05D005128 ORTHO05D006227 1.8e-43 179.5 123 66.7
Pp3c15_3940 Physcomitrium patens HOM05D005128 ORTHO05D006227 7.0e-43 177.6 123 69.1
SEGI_29435 Sequoiadendron giganteum HOM05D005128 ORTHO05D006227 9.1e-43 177.2 110 75.5
Carub.0006s3721 Capsella rubella HOM05D005128 ORTHO05D006227 1.2e-42 176.8 123 66.7
CARHR248040 Cardamine hirsuta HOM05D005128 ORTHO05D006227 1.2e-42 176.8 123 66.7
AagrBONN_evm.TU.Sc2ySwM_369.256 Anthoceros agrestis HOM05D005128 ORTHO05D006227 1.6e-42 176.4 141 59.6
AT4G01710 Arabidopsis thaliana HOM05D005128 ORTHO05D006227 1.6e-42 176.4 123 66.7
EL10Ac1g00782 Beta vulgaris HOM05D005128 ORTHO05D006227 1.6e-42 176.4 123 68.3
Aa31LG5G70 Aethionema arabicum HOM05D005128 ORTHO05D006227 2.0e-42 176.0 123 65.9
AL6G53500 Arabidopsis lyrata HOM05D005128 ORTHO05D006227 2.0e-42 176.0 123 65.9
Lj3g0015662 Lotus japonicus HOM05D005128 ORTHO05D006227 2.7e-42 175.6 123 67.5
THA.LOC104814071 Tarenaya hassleriana HOM05D005128 ORTHO05D006227 2.7e-42 175.6 123 66.7
AUR62023426 Chenopodium quinoa HOM05D005128 ORTHO05D006227 3.5e-42 175.3 123 67.5
Sp2g28380 Schrenkiella parvula HOM05D005128 ORTHO05D006227 4.5e-42 174.9 123 65.9
Ca_14055_v3 Cicer arietinum L. HOM05D005128 ORTHO05D006227 5.9e-42 174.5 123 67.5
C03p60810 Brassica napus HOM05D005128 ORTHO05D006227 7.7e-42 174.1 123 66.7
Psat0s118g0040 Pisum sativum HOM05D005128 ORTHO05D006227 7.7e-42 174.1 123 67.5
Hund11691 Selenicereus undatus HOM05D005128 ORTHO05D006227 7.7e-42 174.1 123 66.7
Medtr8g006725 Medicago truncatula HOM05D005128 ORTHO05D006227 1.3e-41 173.3 123 66.7
Nn1g00897 Nelumbo nucifera HOM05D005128 ORTHO05D006227 1.3e-41 173.3 123 65.0
TPR.G33121 Trifolium pratense HOM05D005128 ORTHO05D006227 1.3e-41 173.3 123 66.7
FAN03G2425 Fragaria x ananassa HOM05D005128 ORTHO05D006227 1.7e-41 172.9 145 58.6
A06p32130 Brassica napus HOM05D005128 ORTHO05D006227 2.3e-41 172.6 123 65.9
BolC3t18340H Brassica oleracea HOM05D005128 ORTHO05D006227 2.3e-41 172.6 123 65.9
BraA06t26141Z Brassica rapa HOM05D005128 ORTHO05D006227 2.3e-41 172.6 123 65.9
AUR62013728 Chenopodium quinoa HOM05D005128 ORTHO05D006227 2.3e-41 172.6 123 65.9
Thhalv10005116m.g Eutrema salsugineum HOM05D005128 ORTHO05D006227 2.3e-41 172.6 123 64.2
Medtr1g112900 Medicago truncatula HOM05D005128 ORTHO05D006227 2.9e-41 172.2 123 65.9
HanXRQChr16g0520301 Helianthus annuus HOM05D005128 ORTHO05D006227 3.8e-41 171.8 121 65.3
Lalb_Chr07g0195501 Lupinus albus HOM05D005128 ORTHO05D006227 6.5e-41 171.0 123 64.2
Lalb_Chr13g0304581 Lupinus albus HOM05D005128 ORTHO05D006227 6.5e-41 171.0 123 64.2
Glyma.07G112500 Glycine max HOM05D005128 ORTHO05D006227 8.6e-41 170.6 123 65.0
Phvul.010G052100 Phaseolus vulgaris HOM05D005128 ORTHO05D006227 8.6e-41 170.6 123 65.9
VMungo0331G0261 Vigna mungo HOM05D005128 ORTHO05D006227 8.6e-41 170.6 123 65.0
Glyma.03G114200 Glycine max HOM05D005128 ORTHO05D006227 3.6e-39 165.2 123 63.4
AT5G65274 Arabidopsis thaliana HOM05D005128 ORTHO05D006227 2.3e-38 162.5 123 60.2
Gohir.D11G020200 Gossypium hirsutum HOM05D005128 ORTHO05D006227 3.0e-38 162.2 121 62.8
Carub.0008s2615 Capsella rubella HOM05D005128 ORTHO05D006227 4.0e-38 161.8 123 61.8
PGSC0003DMG400026042 Solanum tuberosum HOM05D005128 ORTHO05D006227 1.5e-37 159.8 176 48.3
Gorai.007G021500 Gossypium raimondii HOM05D005128 ORTHO05D006227 2.6e-37 159.1 116 62.9
Sc02g0003030 Simmondsia chinensis HOM05D005128 ORTHO05D006227 9.8e-37 157.1 103 69.9
arahy.Tifrunner.gnm1.ann1.L9RWF4 Arachis hypogaea HOM05D005128 ORTHO05D006227 2.2e-36 156.0 155 52.3
Gohir.A13G167950 Gossypium hirsutum HOM05D005128 ORTHO05D006227 2.8e-36 155.6 121 60.3
arahy.Tifrunner.gnm1.ann1.V0IP08 Arachis hypogaea HOM05D005128 ORTHO05D006227 6.3e-36 154.5 155 51.6
AL8G42840 Arabidopsis lyrata HOM05D005128 ORTHO05D006227 8.3e-36 154.1 119 59.7
FAN01G3136 Fragaria x ananassa HOM05D005128 ORTHO05D006227 1.2e-34 150.2 123 59.3
MD07G1103100 Malus domestica HOM05D005128 ORTHO05D006227 2.7e-34 149.1 123 60.2
Ah.05g173200 Amaranthus hybridus HOM05D005128 ORTHO05D006227 5.0e-33 144.8 187 43.9
Haze_02808 Corylus avellana HOM05D005128 ORTHO05D006227 1.5e-32 143.3 124 58.1
CDE02G2422 Ceratophyllum demersum HOM05D005128 ORTHO05D006227 2.8e-31 139.0 79 75.9
Eucgr.L02413 Eucalyptus grandis HOM05D005128 ORTHO05D006227 4.7e-31 138.3 85 70.6
CiPaw.14G021600 Carya illinoinensis HOM05D005128 ORTHO05D006227 5.2e-30 134.8 129 55.8
Eucgr.E04335 Eucalyptus grandis HOM05D005128 ORTHO05D006227 2.6e-29 132.5 85 68.2
SGA_v2.0_scaffold153G36917 Striga asiatica HOM05D005128 ORTHO05D006227 5.8e-29 131.3 123 53.7
Eucgr.H02816 Eucalyptus grandis HOM05D005128 ORTHO05D006227 2.7e-26 122.5 75 70.7
Sabra14G0033100 Salix brachista HOM05D005128 ORTHO05D006227 3.5e-26 122.1 71 74.6
Eucgr.J01567 Eucalyptus grandis HOM05D005128 ORTHO05D006227 1.7e-25 119.8 68 76.5
Eucgr.E02797 Eucalyptus grandis HOM05D005128 ORTHO05D006227 5.0e-25 118.2 89 65.2
Eucgr.E00550 Eucalyptus grandis HOM05D005128 ORTHO05D006227 2.8e-23 112.5 84 61.9
Nitab4.5_0029376g0010 Nicotiana tabacum HOM05D005128 ORTHO05D006227 2.3e-22 109.4 77 67.5
Oeu064660.1 Olea europaea HOM05D005128 ORTHO05D006227 5.2e-22 108.2 78 66.7
Sed0016493 Sechium edule HOM05D005128 ORTHO05D006227 1.2e-21 107.1 139 47.5
Eucgr.C04409 Eucalyptus grandis HOM05D005128 ORTHO05D006227 2.6e-21 105.9 79 62.0
SalBow7G0891 Salvia bowleyana HOM05D005128 ORTHO05D006227 4.4e-21 105.1 78 65.4
Dinv44074 Davidia involucrata HOM05D005128 ORTHO05D006227 7.5e-21 104.4 89 58.4
SalBow5G0414 Salvia bowleyana HOM05D005128 ORTHO05D006227 7.5e-21 104.4 78 64.1
Eucgr.J01375 Eucalyptus grandis HOM05D005128 ORTHO05D006227 2.9e-20 102.4 76 63.2
Lalb_Chr13g0304531 Lupinus albus HOM05D005128 ORTHO05D006227 2.1e-18 96.3 78 59.0
Lalb_Chr13g0304521 Lupinus albus HOM05D005128 ORTHO05D006227 4.6e-18 95.1 78 57.7
Lalb_Chr13g0304591 Lupinus albus HOM05D005128 ORTHO05D006227 4.6e-18 95.1 78 57.7
MD15G1416400 Malus domestica HOM05D005128 ORTHO05D006227 6.0e-18 94.7 92 54.3
Lj9C558G6 Lonicera japonica HOM05D001638 ORTHO05D001875 1.0e-17 94.0 60 70.0
Hund07697 Selenicereus undatus HOM05D005128 ORTHO05D006227 1.2e-15 87.0 72 58.3
Hund17078 Selenicereus undatus HOM05D005128 ORTHO05D006227 1.4e-14 83.6 88 51.1
Lalb_Chr13g0304551 Lupinus albus HOM05D005128 ORTHO05D006227 1.5e-13 80.1 46 71.7
TPR.G6927 Trifolium pratense HOM05D005128 ORTHO05D006922 9.9e-13 77.4 45 71.1
Gorai.002G193300 Gossypium raimondii HOM05D005128 ORTHO05D006227 2.4e-11 72.8 98 43.9
MD07G1103500 Malus domestica HOM05D005128 ORTHO05D006227 5.1e-09 65.1 56 60.7
BcaC03g18322 Brassica carinata HOM05D005128 ORTHO05D006227 2.1e-07 59.7 37 67.6
TPR.G6976 Trifolium pratense HOM05D005128 ORTHO05D006227 1.1e-06 57.4 41 56.1
Gohir.D01G155933 Gossypium hirsutum HOM05D005128 ORTHO05D006227 3.1e-06 55.8 89 39.3


User provided reference genes

Program Settings