Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO199G0052 Selaginella moellendorffii HOM05D005856 ORTHO05D007264 4.9e-154 547.7 274 100.0
SMO361G0803 Selaginella moellendorffii HOM05D005856 ORTHO05D007264 5.7e-102 374.8 249 79.5
SMO199G0068 Selaginella moellendorffii HOM05D005856 ORTHO05D007264 1.1e-89 334.0 257 71.6
SMO236G0063 Selaginella moellendorffii HOM05D005856 ORTHO05D007264 1.1e-63 247.7 176 75.0
FAN22G0691 Fragaria x ananassa HOM05D005856 ORTHO05D007264 2.9e-29 133.3 185 43.8
SGA_v2.0_scaffold135G34936 Striga asiatica HOM05D005856 ORTHO05D007264 2.9e-29 133.3 172 44.8
MELO3C011452.2 Cucumis melo HOM05D005856 ORTHO05D007264 4.9e-29 132.5 222 39.6
Sed0007662 Sechium edule HOM05D005856 ORTHO05D007264 4.9e-29 132.5 222 39.6
Cfa009330 Carpinus fangiana HOM05D005856 ORTHO05D007264 8.4e-29 131.7 221 39.4
MD13G1117100 Malus domestica HOM05D005856 ORTHO05D007264 8.4e-29 131.7 222 38.7
Oeu036879.1 Olea europaea HOM05D005856 ORTHO05D007264 8.4e-29 131.7 177 44.1
RcHm_v2.0_Chr4g0430601 Rosa chinensis HOM05D005856 ORTHO05D007264 1.1e-28 131.3 178 43.8
CsaV3_6G032280 Cucumis sativus L. HOM05D005856 ORTHO05D007264 1.4e-28 131.0 222 39.6
FvH4_4g23940 Fragaria vesca HOM05D005856 ORTHO05D007264 1.4e-28 131.0 184 43.5
arahy.Tifrunner.gnm1.ann1.E9QWSH Arachis hypogaea HOM05D005856 ORTHO05D007264 1.9e-28 130.6 222 37.8
ClCG08G010110 Citrullus lanatus HOM05D005856 ORTHO05D007264 1.9e-28 130.6 224 38.8
VMungo1383G1560 Vigna mungo HOM05D005856 ORTHO05D007264 1.9e-28 130.6 175 44.0
arahy.Tifrunner.gnm1.ann1.ID6EX5 Arachis hypogaea HOM05D005856 ORTHO05D007264 2.5e-28 130.2 222 37.8
Medtr3g085550 Medicago truncatula HOM05D005856 ORTHO05D007264 2.5e-28 130.2 222 38.3
Phvul.001G260800 Phaseolus vulgaris HOM05D005856 ORTHO05D007264 2.5e-28 130.2 196 40.3
Aqoxy5G03410 Aquilegia oxysepala HOM05D005856 ORTHO05D007264 3.2e-28 129.8 224 37.9
COL.COLO4_20381 Corchorus olitorius HOM05D005856 ORTHO05D007264 3.2e-28 129.8 223 38.1
DCAR_031194 Daucus carota HOM05D005856 ORTHO05D007264 3.2e-28 129.8 177 44.1
Thecc.02G210800 Theobroma cacao HOM05D005856 ORTHO05D007264 3.2e-28 129.8 222 38.3
FAN07G1943 Fragaria x ananassa HOM05D005856 ORTHO05D007264 4.2e-28 129.4 184 42.9
Glyma.18G007700 Glycine max HOM05D005856 ORTHO05D007264 5.5e-28 129.0 175 43.4
BcaB03g15198 Brassica carinata HOM05D005856 ORTHO05D007264 7.1e-28 128.6 177 42.9
Ciclev10031347m.g Citrus clementina HOM05D005856 ORTHO05D007264 7.1e-28 128.6 226 37.2
Psat5g095080 Pisum sativum HOM05D005856 ORTHO05D007264 7.1e-28 128.6 222 37.8
Migut.H00051 Erythranthe guttata HOM05D005856 ORTHO05D007264 9.3e-28 128.3 177 43.5
FAN17G0012 Fragaria x ananassa HOM05D005856 ORTHO05D007264 9.3e-28 128.3 184 42.9
TPR.G28278 Trifolium pratense HOM05D005856 ORTHO05D007264 9.3e-28 128.3 222 37.4
THA.LOC104807593 Tarenaya hassleriana HOM05D005856 ORTHO05D007264 1.2e-27 127.9 177 43.5
Haze_12395 Corylus avellana HOM05D005856 ORTHO05D007264 1.6e-27 127.5 177 42.9
Lalb_Chr11g0075741 Lupinus albus HOM05D005856 ORTHO05D007264 1.6e-27 127.5 181 42.0
Potri.016G023500 Populus trichocarpa HOM05D005856 ORTHO05D007264 1.6e-27 127.5 175 41.7
CDE05G3252 Ceratophyllum demersum HOM05D005856 ORTHO05D007264 2.1e-27 127.1 176 43.8
Ca_16469_v3 Cicer arietinum L. HOM05D005856 ORTHO05D007264 2.1e-27 127.1 177 42.4
Glyma.11G249500 Glycine max HOM05D005856 ORTHO05D007264 2.1e-27 127.1 196 40.3
Prupe.1G228400 Prunus persica HOM05D005856 ORTHO05D007264 2.1e-27 127.1 222 37.4
Potri.006G025300 Populus trichocarpa HOM05D005856 ORTHO05D007264 2.7e-27 126.7 185 40.5
BcaC08g46160 Brassica carinata HOM05D005856 ORTHO05D007264 3.5e-27 126.3 176 42.6
A07p34000 Brassica napus HOM05D005856 ORTHO05D007264 3.5e-27 126.3 176 42.6
BraA07t31027Z Brassica rapa HOM05D005856 ORTHO05D007264 3.5e-27 126.3 176 42.6
Manes.13G018400 Manihot esculenta HOM05D005856 ORTHO05D007264 3.5e-27 126.3 177 41.8
QL03p053723 Quercus lobata HOM05D005856 ORTHO05D007264 3.5e-27 126.3 177 42.9
PGR119G1218 Punica granatum HOM05D005856 ORTHO05D007264 4.6e-27 125.9 179 43.0
Duzib248G0543 Durio zibethinus HOM05D005856 ORTHO05D007264 6.0e-27 125.6 222 36.5
Nn4g22353 Nelumbo nucifera HOM05D005856 ORTHO05D007264 7.9e-27 125.2 177 41.8
TAR622G1129 Trochodendron aralioides HOM05D005856 ORTHO05D007264 7.9e-27 125.2 213 38.5
Thhalv10019531m.g Eutrema salsugineum HOM05D005856 ORTHO05D007264 1.0e-26 124.8 196 39.3
HPP92_013615 Vanilla planifolia HOM05D005856 ORTHO05D007264 1.3e-26 124.4 176 44.3
Actinidia20701 Actinidia chinensis HOM05D005856 ORTHO05D007264 1.8e-26 124.0 221 37.6
Nitab4.5_0000367g0010 Nicotiana tabacum HOM05D005856 ORTHO05D007264 1.8e-26 124.0 178 41.6
Nitab4.5_0000379g0010 Nicotiana tabacum HOM05D005856 ORTHO05D007264 1.8e-26 124.0 178 41.6
CANSAT01G0688 Cannabis sativa HOM05D005856 ORTHO05D007264 2.3e-26 123.6 221 37.6
ECA233G1277 Erigeron canadensis HOM05D005856 ORTHO05D007264 2.3e-26 123.6 222 38.3
HanXRQChr08g0207721 Helianthus annuus HOM05D005856 ORTHO05D007264 2.3e-26 123.6 222 37.8
PGSC0003DMG400015053 Solanum tuberosum HOM05D005856 ORTHO05D007264 2.3e-26 123.6 222 37.8
Atru.chr11.2307 Acer truncatum HOM05D005856 ORTHO05D007264 3.0e-26 123.2 222 36.0
Pp3c14_19540 Physcomitrium patens HOM05D005856 ORTHO05D007264 3.0e-26 123.2 193 39.9
Rhsim12G0099000 Rhododendron simsii HOM05D005856 ORTHO05D007264 5.1e-26 122.5 221 37.1
Sp5g22410 Schrenkiella parvula HOM05D005856 ORTHO05D007264 5.1e-26 122.5 175 41.1
Peaxi162Scf00128g01130 Petunia axillaris HOM05D005856 ORTHO05D007264 6.7e-26 122.1 222 37.8
Solyc05g015310.3 Solanum lycopersicum HOM05D005856 ORTHO05D007264 6.7e-26 122.1 222 37.8
Sopen05g010580 Solanum pennellii HOM05D005856 ORTHO05D007264 6.7e-26 122.1 222 37.8
Aa31sc1092G20 Aethionema arabicum HOM05D005856 ORTHO05D007264 8.7e-26 121.7 216 36.6
CAN.G43.18 Capsicum annuum HOM05D005856 ORTHO05D007264 8.7e-26 121.7 222 37.4
CiPaw.05G111700 Carya illinoinensis HOM05D005856 ORTHO05D007264 1.1e-25 121.3 222 36.9
Lsat_1_v5_gn_8_149340 Lactuca sativa HOM05D005856 ORTHO05D007264 1.1e-25 121.3 180 41.7
SEGI_12163 Sequoiadendron giganteum HOM05D005856 ORTHO05D007264 1.1e-25 121.3 227 35.2
SMO199G0090 Selaginella moellendorffii HOM05D005856 ORTHO05D007264 1.9e-25 120.6 135 54.1
SalBow1G2377 Salvia bowleyana HOM05D005856 ORTHO05D007264 2.5e-25 120.2 177 41.2
Carub.0002s1377 Capsella rubella HOM05D005856 ORTHO05D007264 3.3e-25 119.8 221 37.1
Eucgr.H04651 Eucalyptus grandis HOM05D005856 ORTHO05D007264 3.3e-25 119.8 183 39.3
Sc04g0010050 Simmondsia chinensis HOM05D005856 ORTHO05D007264 3.3e-25 119.8 181 40.9
AT1G67440 Arabidopsis thaliana HOM05D005856 ORTHO05D007264 4.3e-25 119.4 176 40.9
CARHR059980 Cardamine hirsuta HOM05D005856 ORTHO05D007264 4.3e-25 119.4 175 40.6
Lj3g0022861 Lotus japonicus HOM05D005856 ORTHO05D007264 4.3e-25 119.4 177 41.2
EL10Ac6g13483 Beta vulgaris HOM05D005856 ORTHO05D007264 5.7e-25 119.0 177 40.7
Gohir.A04G139000 Gossypium hirsutum HOM05D005856 ORTHO05D007264 7.4e-25 118.6 222 36.5
CSS0025471 Camellia sinensis var. sinensis HOM05D005856 ORTHO05D007264 9.7e-25 118.2 177 41.2
Hund06082 Selenicereus undatus HOM05D005856 ORTHO05D007264 1.6e-24 117.5 236 34.7
ATR0561G073 Amborella trichopoda HOM05D005856 ORTHO05D007264 2.2e-24 117.1 224 36.2
HPP92_024239 Vanilla planifolia HOM05D005856 ORTHO05D007264 2.2e-24 117.1 182 37.9
GSVIVG01010446001 Vitis vinifera HOM05D005856 ORTHO05D007264 2.2e-24 117.1 178 41.0
Lj3A1066G66 Lonicera japonica HOM05D005856 ORTHO05D007264 3.7e-24 116.3 222 35.6
Zm00001eb420890 Zea mays HOM05D005856 ORTHO05D007264 3.7e-24 116.3 167 41.3
PSO782G2456 Papaver somniferum HOM05D005856 ORTHO05D007264 4.8e-24 115.9 227 34.4
Gorai.012G175300 Gossypium raimondii HOM05D005856 ORTHO05D007264 6.3e-24 115.5 237 33.8
AagrBONN_evm.TU.Sc2ySwM_344.2476 Anthoceros agrestis HOM05D005856 ORTHO05D007264 1.1e-23 114.8 198 36.9
CSS0003803 Camellia sinensis var. sinensis HOM05D005856 ORTHO05D007264 1.1e-23 114.8 180 40.0
Cc11_g00900 Coffea canephora HOM05D005856 ORTHO05D007264 1.1e-23 114.8 177 37.9
AL2G26010 Arabidopsis lyrata HOM05D005856 ORTHO05D007264 1.4e-23 114.4 221 36.2
PSO063G1304 Papaver somniferum HOM05D005856 ORTHO05D007264 1.8e-23 114.0 236 34.3
Sp5g22430 Schrenkiella parvula HOM05D005856 ORTHO05D007264 1.8e-23 114.0 190 37.4
Mapoly0076s0016 Marchantia polymorpha HOM05D005856 ORTHO05D007264 2.4e-23 113.6 199 36.2
TWI36G0309 Tripterygium wilfordii HOM05D005856 ORTHO05D007264 2.4e-23 113.6 223 33.6
Sabra06G0018600 Salix brachista HOM05D005856 ORTHO05D007264 5.3e-23 112.5 210 36.2
Manes.12G012850 Manihot esculenta HOM05D005856 ORTHO05D007264 9.0e-23 111.7 177 39.5
MCO13G068 Micromonas commoda HOM05D005856 ORTHO05D007264 9.0e-23 111.7 181 39.2
Os04g0381600 Oryza sativa ssp. japonica HOM05D005856 ORTHO05D007264 4.5e-22 109.4 203 34.0
Thhalv10019423m.g Eutrema salsugineum HOM05D005856 ORTHO05D007264 1.3e-21 107.8 166 39.2
AL2G26030 Arabidopsis lyrata HOM05D005856 ORTHO05D007264 1.7e-21 107.5 186 35.5
Ah.03g136240 Amaranthus hybridus HOM05D005856 ORTHO05D007264 1.4e-20 104.4 150 41.3
AUR62024126 Chenopodium quinoa HOM05D005856 ORTHO05D007264 4.2e-20 102.8 214 34.1
unitig_88.g27631 Utricularia gibba HOM05D005856 ORTHO05D007264 1.2e-19 101.3 225 31.1
AUR62005602 Chenopodium quinoa HOM05D005856 ORTHO05D007264 3.6e-19 99.8 157 39.5
AUR62005603 Chenopodium quinoa HOM05D005856 ORTHO05D007264 3.6e-19 99.8 227 32.2
Cpa.g.sc351.3 Carica papaya HOM05D005856 ORTHO05D007264 1.0e-18 98.2 163 39.3
Actinidia26816 Actinidia chinensis HOM05D005856 ORTHO05D007264 8.8e-18 95.1 215 33.5
Dinv14826 Davidia involucrata HOM05D005856 ORTHO05D007264 7.4e-17 92.0 169 37.3
CARHR068030 Cardamine hirsuta HOM05D005856 ORTHO05D007264 1.7e-16 90.9 161 33.5
ECA240G4225 Erigeron canadensis HOM05D005856 ORTHO05D007264 1.7e-16 90.9 168 40.5
Carub.0002s1379 Capsella rubella HOM05D005856 ORTHO05D007264 6.3e-16 89.0 95 47.4
AT1G67460 Arabidopsis thaliana HOM05D005856 ORTHO05D007264 1.1e-15 88.2 95 47.4
FAN12G0203 Fragaria x ananassa HOM05D005856 ORTHO05D007264 1.1e-15 88.2 154 39.6
CBR_g49528 Chara braunii HOM05D005856 ORTHO05D007264 1.2e-14 84.7 212 29.7
C06p42840 Brassica napus HOM05D005856 ORTHO05D007264 2.0e-14 84.0 148 39.9
BolC6t39153H Brassica oleracea HOM05D005856 ORTHO05D007264 2.0e-14 84.0 148 39.9
SMO199G0065 Selaginella moellendorffii HOM05D024677 ORTHO05D373697 1.6e-11 74.3 72 58.3
SMO364G0554 Selaginella moellendorffii HOM05D005827 ORTHO05D005864 6.1e-11 72.4 110 43.6
Cre10.g436600 Chlamydomonas reinhardtii HOM05D005856 ORTHO05D007264 2.6e-09 67.0 111 38.7
Gohir.D04G181900 Gossypium hirsutum HOM05D005856 ORTHO05D007264 7.4e-09 65.5 200 29.0


User provided reference genes

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