Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO173G0066 Selaginella moellendorffii HOM05D004619 ORTHO05D005738 1.3e-168 596.3 286 100.0
SMO173G0047 Selaginella moellendorffii HOM05D004619 ORTHO05D005738 4.8e-136 488.0 289 84.8
SMO146G0002 Selaginella moellendorffii HOM05D004619 ORTHO05D005738 4.1e-135 485.0 253 93.7
SMO173G0051 Selaginella moellendorffii HOM05D004619 ORTHO05D005738 3.9e-69 265.8 163 81.6
MBI01_g18389_MAGBIO Magnolia biondii HOM05D004619 ORTHO05D005738 7.9e-46 188.3 255 42.0
Medtr1g006690 Medicago truncatula HOM05D004619 ORTHO05D005738 1.8e-45 187.2 256 41.8
Ca_12754_v3 Cicer arietinum L. HOM05D004619 ORTHO05D005738 3.0e-45 186.4 256 43.4
Gorai.010G106300 Gossypium raimondii HOM05D004619 ORTHO05D005738 6.7e-45 185.3 281 39.9
Gohir.D06G092300 Gossypium hirsutum HOM05D004619 ORTHO05D005738 1.1e-44 184.5 281 40.2
Lalb_Chr14g0362511 Lupinus albus HOM05D004619 ORTHO05D005738 1.1e-44 184.5 278 40.6
TPR.G24498 Trifolium pratense HOM05D004619 ORTHO05D005738 1.3e-43 181.0 255 42.0
Thecc.09G045500 Theobroma cacao HOM05D004619 ORTHO05D005738 1.7e-43 180.6 259 39.4
MD15G1093200 Malus domestica HOM05D004619 ORTHO05D005738 2.8e-43 179.9 252 41.3
Lj1g0001172 Lotus japonicus HOM05D004619 ORTHO05D005738 3.7e-43 179.5 260 41.5
ATR0705G091 Amborella trichopoda HOM05D004619 ORTHO05D005738 6.3e-43 178.7 253 41.5
Gohir.A06G092700 Gossypium hirsutum HOM05D004619 ORTHO05D005738 6.3e-43 178.7 281 38.4
Glyma.17G193800 Glycine max HOM05D004619 ORTHO05D005738 8.2e-43 178.3 250 41.6
Nitab4.5_0001515g0010 Nicotiana tabacum HOM05D004619 ORTHO05D005738 8.2e-43 178.3 253 40.3
Phvul.001G074000 Phaseolus vulgaris HOM05D004619 ORTHO05D005738 1.4e-42 177.6 248 43.5
Prupe.1G448000 Prunus persica HOM05D004619 ORTHO05D005738 1.4e-42 177.6 273 39.6
FAN27G0819 Fragaria x ananassa HOM05D004619 ORTHO05D005738 2.4e-42 176.8 249 41.0
FAN20G0141 Fragaria x ananassa HOM05D004619 ORTHO05D005738 3.1e-42 176.4 249 41.0
Pp3c16_3750 Physcomitrium patens HOM05D004619 ORTHO05D005738 4.1e-42 176.0 278 38.8
Cfa013367 Carpinus fangiana HOM05D004619 ORTHO05D005738 5.3e-42 175.6 277 37.9
Duzib168G0872 Durio zibethinus HOM05D004619 ORTHO05D005738 5.3e-42 175.6 257 38.9
Zm00001eb152980 Zea mays HOM05D004619 ORTHO05D005738 5.3e-42 175.6 271 38.4
FvH4_2g35520 Fragaria vesca HOM05D004619 ORTHO05D005738 6.9e-42 175.3 249 40.6
COL.COLO4_20972 Corchorus olitorius HOM05D004619 ORTHO05D005738 1.5e-41 174.1 259 40.5
Os01g0746200 Oryza sativa ssp. japonica HOM05D004619 ORTHO05D005738 2.6e-41 173.3 277 36.8
AagrBONN_evm.TU.Sc2ySwM_368.2349 Anthoceros agrestis HOM05D004619 ORTHO05D005738 3.4e-41 172.9 273 39.2
Ciclev10007610m.g Citrus clementina HOM05D004619 ORTHO05D005738 3.4e-41 172.9 271 39.1
arahy.Tifrunner.gnm1.ann1.CES4LM Arachis hypogaea HOM05D004619 ORTHO05D005738 4.5e-41 172.6 258 38.4
Psat6g038280 Pisum sativum HOM05D004619 ORTHO05D005738 4.5e-41 172.6 223 42.6
RcHm_v2.0_Chr6g0306261 Rosa chinensis HOM05D004619 ORTHO05D005738 4.5e-41 172.6 280 39.3
Hma1.2p1_0049F.1_g028570 Hydrangea macrophylla HOM05D004619 ORTHO05D005738 1.0e-40 171.4 258 40.7
Hma1.2p1_0049F.1_g028580 Hydrangea macrophylla HOM05D004619 ORTHO05D005738 1.0e-40 171.4 258 40.7
Lj8A581G22 Lonicera japonica HOM05D004619 ORTHO05D005738 1.0e-40 171.4 272 38.2
Nitab4.5_0003794g0010 Nicotiana tabacum HOM05D004619 ORTHO05D005738 1.0e-40 171.4 255 39.6
PSO210G5473 Papaver somniferum HOM05D004619 ORTHO05D005738 1.0e-40 171.4 264 37.5
GSVIVG01035621001 Vitis vinifera HOM05D004619 ORTHO05D005738 1.0e-40 171.4 261 37.9
arahy.Tifrunner.gnm1.ann1.Z9IJD2 Arachis hypogaea HOM05D004619 ORTHO05D005738 1.3e-40 171.0 258 38.4
Mapoly0014s0066 Marchantia polymorpha HOM05D004619 ORTHO05D005738 1.3e-40 171.0 238 39.1
Atru.chr7.2086 Acer truncatum HOM05D004619 ORTHO05D005738 1.7e-40 170.6 274 37.6
ClCG08G012210 Citrullus lanatus HOM05D004619 ORTHO05D005738 1.7e-40 170.6 263 37.3
Sed0007447 Sechium edule HOM05D004619 ORTHO05D005738 2.2e-40 170.2 264 38.6
CSS0016966 Camellia sinensis var. sinensis HOM05D004619 ORTHO05D005738 2.9e-40 169.9 280 36.8
PSO210G6185 Papaver somniferum HOM05D004619 ORTHO05D005738 5.0e-40 169.1 247 38.1
CSS0048446 Camellia sinensis var. sinensis HOM05D004619 ORTHO05D005738 6.5e-40 168.7 280 36.8
QL12p041325 Quercus lobata HOM05D004619 ORTHO05D005738 8.5e-40 168.3 278 36.0
VMungo0647G1361 Vigna mungo HOM05D004619 ORTHO05D005738 1.1e-39 167.9 243 42.8
Aqoxy7G03899 Aquilegia oxysepala HOM05D004619 ORTHO05D005738 1.4e-39 167.5 259 38.2
Manes.16G075300 Manihot esculenta HOM05D004619 ORTHO05D005738 1.9e-39 167.2 257 38.9
TAR636G2525 Trochodendron aralioides HOM05D004619 ORTHO05D005738 1.9e-39 167.2 258 39.5
PGR031G0242 Punica granatum HOM05D004619 ORTHO05D005738 2.5e-39 166.8 258 38.4
CANSAT25G1337 Cannabis sativa HOM05D004619 ORTHO05D005738 4.2e-39 166.0 259 37.8
THA.LOC104803757 Tarenaya hassleriana HOM05D004619 ORTHO05D005738 4.2e-39 166.0 283 36.0
CARHR240910 Cardamine hirsuta HOM05D004619 ORTHO05D005738 5.5e-39 165.6 258 37.6
SGA_v2.0_scaffold169G38654 Striga asiatica HOM05D004619 ORTHO05D005738 5.5e-39 165.6 237 38.8
CsaV3_2G030840 Cucumis sativus L. HOM05D004619 ORTHO05D005738 9.4e-39 164.9 263 37.6
Aa31sc131G40 Aethionema arabicum HOM05D004619 ORTHO05D005738 1.2e-38 164.5 286 37.4
AL7G18800 Arabidopsis lyrata HOM05D004619 ORTHO05D005738 1.2e-38 164.5 283 36.0
SalBow1G6937 Salvia bowleyana HOM05D004619 ORTHO05D005738 1.2e-38 164.5 280 37.1
Nn8g39783 Nelumbo nucifera HOM05D004619 ORTHO05D005738 1.6e-38 164.1 258 38.8
Peaxi162Scf00227g00812 Petunia axillaris HOM05D004619 ORTHO05D005738 1.6e-38 164.1 254 37.8
Sp7g30680 Schrenkiella parvula HOM05D004619 ORTHO05D005738 2.1e-38 163.7 257 37.4
Solyc08g066580.4 Solanum lycopersicum HOM05D004619 ORTHO05D005738 2.1e-38 163.7 260 39.2
EL10Ac2g04016 Beta vulgaris HOM05D004619 ORTHO05D005738 3.6e-38 162.9 263 35.7
Thhalv10024536m.g Eutrema salsugineum HOM05D004619 ORTHO05D005738 3.6e-38 162.9 258 36.8
Carub.0007s0758 Capsella rubella HOM05D004619 ORTHO05D005738 6.1e-38 162.2 258 36.8
AT4G32910 Arabidopsis thaliana HOM05D004619 ORTHO05D005738 1.0e-37 161.4 259 37.1
BraA01t00511Z Brassica rapa HOM05D004619 ORTHO05D005738 1.0e-37 161.4 260 36.2
BcaC09g52091 Brassica carinata HOM05D004619 ORTHO05D005738 1.4e-37 161.0 260 37.7
C01p05790 Brassica napus HOM05D004619 ORTHO05D005738 1.4e-37 161.0 260 37.7
Oeu031693.1 Olea europaea HOM05D004619 ORTHO05D005738 1.4e-37 161.0 250 38.4
Sopen08g020420 Solanum pennellii HOM05D004619 ORTHO05D005738 1.4e-37 161.0 260 38.5
MSTRG.1660 Avicennia marina HOM05D004619 ORTHO05D005738 1.8e-37 160.6 230 40.4
BcaC09g52090 Brassica carinata HOM05D004619 ORTHO05D005738 1.8e-37 160.6 260 37.7
Ah.10g035010 Amaranthus hybridus HOM05D004619 ORTHO05D005738 3.0e-37 159.8 247 38.1
A01p05370 Brassica napus HOM05D004619 ORTHO05D005738 3.9e-37 159.5 260 36.2
Eucgr.C00551 Eucalyptus grandis HOM05D004619 ORTHO05D005738 5.2e-37 159.1 235 40.0
Eucgr.C00596 Eucalyptus grandis HOM05D004619 ORTHO05D005738 5.2e-37 159.1 235 39.6
Sc23g0005210 Simmondsia chinensis HOM05D004619 ORTHO05D005738 5.2e-37 159.1 257 37.7
HPP92_005572 Vanilla planifolia HOM05D004619 ORTHO05D005738 8.8e-37 158.3 257 40.1
BolC1t00559H Brassica oleracea HOM05D004619 ORTHO05D005738 1.1e-36 157.9 260 36.2
Migut.E01528 Erythranthe guttata HOM05D004619 ORTHO05D005738 4.4e-36 156.0 252 37.7
CDE02G4285 Ceratophyllum demersum HOM05D004619 ORTHO05D005738 5.7e-36 155.6 285 36.1
Cc08_g09590 Coffea canephora HOM05D004619 ORTHO05D005738 9.7e-36 154.8 279 32.6
MELO3C011139.2 Cucumis melo HOM05D004619 ORTHO05D005738 1.3e-35 154.5 270 35.6
Rhsim07G0146900 Rhododendron simsii HOM05D004619 ORTHO05D005738 1.3e-35 154.5 258 35.3
Lsat_1_v5_gn_6_23120 Lactuca sativa HOM05D004619 ORTHO05D005738 8.2e-35 151.8 275 37.1
HanXRQChr13g0402061 Helianthus annuus HOM05D004619 ORTHO05D005738 1.4e-34 151.0 284 34.5
SHI18685 Sapria himalayana HOM05D004619 ORTHO05D005738 2.4e-34 150.2 257 37.4
Actinidia14677 Actinidia chinensis HOM05D004619 ORTHO05D005738 3.1e-34 149.8 245 35.5
Sabra18G0044100 Salix brachista HOM05D004619 ORTHO05D005738 7.0e-34 148.7 153 46.4
Sabra18G0044200 Salix brachista HOM05D004619 ORTHO05D005738 3.5e-33 146.4 149 47.0
CiPaw.07G204000 Carya illinoinensis HOM05D004619 ORTHO05D005738 4.5e-33 146.0 180 39.4
CAN.G400.8 Capsicum annuum HOM05D004619 ORTHO05D005738 1.3e-32 144.4 224 37.5
vmacro05371 Vaccinium macrocarpon HOM05D004619 ORTHO05D005738 1.3e-32 144.4 318 32.1
vmacro23276 Vaccinium macrocarpon HOM05D004619 ORTHO05D005738 1.3e-32 144.4 318 32.1
DCAR_004468 Daucus carota HOM05D004619 ORTHO05D005738 3.8e-32 142.9 228 32.9
ECA233G0099 Erigeron canadensis HOM05D004619 ORTHO05D005738 5.0e-32 142.5 272 32.7
AUR62009276 Chenopodium quinoa HOM05D004619 ORTHO05D005738 1.2e-30 137.9 214 34.1
AUR62039705 Chenopodium quinoa HOM05D004619 ORTHO05D005738 8.8e-29 131.7 148 42.6
Haze_21890 Corylus avellana HOM05D004619 ORTHO05D005738 4.8e-27 125.9 258 33.3
unitig_578.g16586 Utricularia gibba HOM05D004619 ORTHO05D005738 3.1e-26 123.2 215 32.6
Psat7g196840 Pisum sativum HOM05D004619 ORTHO05D005738 5.9e-25 119.0 102 52.0
Hund19512 Selenicereus undatus HOM05D004619 ORTHO05D005738 1.9e-23 114.0 113 46.0
Dinv27905 Davidia involucrata HOM05D004619 ORTHO05D005738 4.7e-22 109.4 101 48.5
Actinidia15739 Actinidia chinensis HOM05D004619 ORTHO05D005738 1.2e-20 104.8 225 30.2
CBR_g55394 Chara braunii HOM05D004619 ORTHO05D005738 7.2e-15 85.5 129 35.7
Cpa.g.sc78.1 Carica papaya HOM05D004619 ORTHO05D005738 3.5e-09 66.6 71 45.1
arahy.Tifrunner.gnm1.ann1.2KYU87 Arachis hypogaea HOM05D004619 ORTHO05D005738 5.6e-07 59.3 49 53.1
arahy.Tifrunner.gnm1.ann1.VKWI5R Arachis hypogaea HOM05D004619 ORTHO05D005738 1.2e-06 58.2 49 53.1
arahy.Tifrunner.gnm1.ann1.7I309S Arachis hypogaea HOM05D004619 ORTHO05D005738 6.1e-06 55.8 49 51.0


User provided reference genes

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