Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO173G0047 Selaginella moellendorffii HOM05D004619 ORTHO05D005738 1.5e-155 552.7 269 100.0
SMO173G0066 Selaginella moellendorffii HOM05D004619 ORTHO05D005738 5.9e-136 487.6 289 84.8
SMO146G0002 Selaginella moellendorffii HOM05D004619 ORTHO05D005738 1.5e-123 446.4 253 87.7
SMO173G0051 Selaginella moellendorffii HOM05D004619 ORTHO05D005738 5.0e-74 282.0 163 85.9
Ca_12754_v3 Cicer arietinum L. HOM05D004619 ORTHO05D005738 4.4e-46 189.1 226 46.5
Medtr1g006690 Medicago truncatula HOM05D004619 ORTHO05D005738 1.3e-45 187.6 226 45.6
Psat6g038280 Pisum sativum HOM05D004619 ORTHO05D005738 3.7e-45 186.0 223 46.6
MBI01_g18389_MAGBIO Magnolia biondii HOM05D004619 ORTHO05D005738 1.4e-44 184.1 208 47.1
Lalb_Chr14g0362511 Lupinus albus HOM05D004619 ORTHO05D005738 4.1e-44 182.6 229 45.0
ATR0705G091 Amborella trichopoda HOM05D004619 ORTHO05D005738 7.0e-44 181.8 207 47.8
TPR.G24498 Trifolium pratense HOM05D004619 ORTHO05D005738 9.1e-44 181.4 225 44.4
AagrBONN_evm.TU.Sc2ySwM_368.2349 Anthoceros agrestis HOM05D004619 ORTHO05D005738 1.0e-42 177.9 224 45.1
Lj1g0001172 Lotus japonicus HOM05D004619 ORTHO05D005738 1.7e-42 177.2 227 44.1
Os01g0746200 Oryza sativa ssp. japonica HOM05D004619 ORTHO05D005738 2.9e-42 176.4 244 40.6
Phvul.001G074000 Phaseolus vulgaris HOM05D004619 ORTHO05D005738 5.0e-42 175.6 221 46.6
MD15G1093200 Malus domestica HOM05D004619 ORTHO05D005738 6.5e-42 175.3 230 43.0
Zm00001eb152980 Zea mays HOM05D004619 ORTHO05D005738 6.5e-42 175.3 239 41.4
Glyma.17G193800 Glycine max HOM05D004619 ORTHO05D005738 8.5e-42 174.9 222 45.9
Gorai.010G106300 Gossypium raimondii HOM05D004619 ORTHO05D005738 1.1e-41 174.5 210 44.3
Nitab4.5_0001515g0010 Nicotiana tabacum HOM05D004619 ORTHO05D005738 1.1e-41 174.5 230 42.6
Aqoxy7G03899 Aquilegia oxysepala HOM05D004619 ORTHO05D005738 1.5e-41 174.1 207 44.9
Pp3c16_3750 Physcomitrium patens HOM05D004619 ORTHO05D005738 1.5e-41 174.1 273 40.7
Gohir.D06G092300 Gossypium hirsutum HOM05D004619 ORTHO05D005738 1.9e-41 173.7 210 44.8
Cfa013367 Carpinus fangiana HOM05D004619 ORTHO05D005738 2.5e-41 173.3 227 42.3
Thecc.09G045500 Theobroma cacao HOM05D004619 ORTHO05D005738 2.5e-41 173.3 208 44.2
VMungo0647G1361 Vigna mungo HOM05D004619 ORTHO05D005738 2.5e-41 173.3 226 45.1
arahy.Tifrunner.gnm1.ann1.CES4LM Arachis hypogaea HOM05D004619 ORTHO05D005738 4.2e-41 172.6 206 45.1
Lj8A581G22 Lonicera japonica HOM05D004619 ORTHO05D005738 4.2e-41 172.6 232 41.8
FAN27G0819 Fragaria x ananassa HOM05D004619 ORTHO05D005738 7.2e-41 171.8 227 42.3
arahy.Tifrunner.gnm1.ann1.Z9IJD2 Arachis hypogaea HOM05D004619 ORTHO05D005738 9.4e-41 171.4 206 45.1
Prupe.1G448000 Prunus persica HOM05D004619 ORTHO05D005738 9.4e-41 171.4 232 43.1
Mapoly0014s0066 Marchantia polymorpha HOM05D004619 ORTHO05D005738 1.2e-40 171.0 219 41.6
PGR031G0242 Punica granatum HOM05D004619 ORTHO05D005738 1.2e-40 171.0 225 42.2
QL12p041325 Quercus lobata HOM05D004619 ORTHO05D005738 1.6e-40 170.6 229 41.5
Ciclev10007610m.g Citrus clementina HOM05D004619 ORTHO05D005738 2.1e-40 170.2 214 44.4
FAN20G0141 Fragaria x ananassa HOM05D004619 ORTHO05D005738 2.1e-40 170.2 227 42.3
TAR636G2525 Trochodendron aralioides HOM05D004619 ORTHO05D005738 2.1e-40 170.2 209 46.4
CARHR240910 Cardamine hirsuta HOM05D004619 ORTHO05D005738 3.6e-40 169.5 230 42.2
ClCG08G012210 Citrullus lanatus HOM05D004619 ORTHO05D005738 3.6e-40 169.5 209 42.6
FvH4_2g35520 Fragaria vesca HOM05D004619 ORTHO05D005738 3.6e-40 169.5 227 41.9
Sed0007447 Sechium edule HOM05D004619 ORTHO05D005738 4.7e-40 169.1 210 44.8
RcHm_v2.0_Chr6g0306261 Rosa chinensis HOM05D004619 ORTHO05D005738 6.1e-40 168.7 230 42.2
SGA_v2.0_scaffold169G38654 Striga asiatica HOM05D004619 ORTHO05D005738 6.1e-40 168.7 222 41.9
GSVIVG01035621001 Vitis vinifera HOM05D004619 ORTHO05D005738 6.1e-40 168.7 209 43.5
Nitab4.5_0003794g0010 Nicotiana tabacum HOM05D004619 ORTHO05D005738 8.0e-40 168.3 232 41.4
Gohir.A06G092700 Gossypium hirsutum HOM05D004619 ORTHO05D005738 1.0e-39 167.9 210 42.4
Hma1.2p1_0049F.1_g028570 Hydrangea macrophylla HOM05D004619 ORTHO05D005738 1.0e-39 167.9 208 44.7
Hma1.2p1_0049F.1_g028580 Hydrangea macrophylla HOM05D004619 ORTHO05D005738 1.0e-39 167.9 208 44.7
Oeu031693.1 Olea europaea HOM05D004619 ORTHO05D005738 1.0e-39 167.9 220 42.7
CsaV3_2G030840 Cucumis sativus L. HOM05D004619 ORTHO05D005738 1.4e-39 167.5 209 43.5
Duzib168G0872 Durio zibethinus HOM05D004619 ORTHO05D005738 1.8e-39 167.2 209 43.1
Eucgr.C00551 Eucalyptus grandis HOM05D004619 ORTHO05D005738 1.8e-39 167.2 206 45.1
SalBow1G6937 Salvia bowleyana HOM05D004619 ORTHO05D005738 1.8e-39 167.2 232 41.4
Eucgr.C00596 Eucalyptus grandis HOM05D004619 ORTHO05D005738 2.3e-39 166.8 206 44.7
Solyc08g066580.4 Solanum lycopersicum HOM05D004619 ORTHO05D005738 2.3e-39 166.8 232 43.5
COL.COLO4_20972 Corchorus olitorius HOM05D004619 ORTHO05D005738 3.0e-39 166.4 208 44.2
Sc23g0005210 Simmondsia chinensis HOM05D004619 ORTHO05D005738 3.0e-39 166.4 204 43.1
CSS0016966 Camellia sinensis var. sinensis HOM05D004619 ORTHO05D005738 4.0e-39 166.0 209 42.1
Manes.16G075300 Manihot esculenta HOM05D004619 ORTHO05D005738 4.0e-39 166.0 209 44.0
BcaC09g52091 Brassica carinata HOM05D004619 ORTHO05D005738 6.8e-39 165.2 232 42.7
C01p05790 Brassica napus HOM05D004619 ORTHO05D005738 6.8e-39 165.2 232 42.7
MSTRG.1660 Avicennia marina HOM05D004619 ORTHO05D005738 8.8e-39 164.9 222 43.2
BcaC09g52090 Brassica carinata HOM05D004619 ORTHO05D005738 8.8e-39 164.9 232 42.7
CSS0048446 Camellia sinensis var. sinensis HOM05D004619 ORTHO05D005738 8.8e-39 164.9 209 42.1
CANSAT25G1337 Cannabis sativa HOM05D004619 ORTHO05D005738 8.8e-39 164.9 230 40.0
Sp7g30680 Schrenkiella parvula HOM05D004619 ORTHO05D005738 8.8e-39 164.9 230 41.3
Sopen08g020420 Solanum pennellii HOM05D004619 ORTHO05D005738 1.2e-38 164.5 232 42.2
Thhalv10024536m.g Eutrema salsugineum HOM05D004619 ORTHO05D005738 2.0e-38 163.7 230 40.9
PSO210G6185 Papaver somniferum HOM05D004619 ORTHO05D005738 4.4e-38 162.5 225 40.0
THA.LOC104803757 Tarenaya hassleriana HOM05D004619 ORTHO05D005738 5.7e-38 162.2 209 41.6
BolC1t00559H Brassica oleracea HOM05D004619 ORTHO05D005738 7.5e-38 161.8 209 43.5
BraA01t00511Z Brassica rapa HOM05D004619 ORTHO05D005738 7.5e-38 161.8 231 39.4
Migut.E01528 Erythranthe guttata HOM05D004619 ORTHO05D005738 9.8e-38 161.4 223 42.6
Peaxi162Scf00227g00812 Petunia axillaris HOM05D004619 ORTHO05D005738 9.8e-38 161.4 212 42.5
Aa31sc131G40 Aethionema arabicum HOM05D004619 ORTHO05D005738 1.3e-37 161.0 209 42.6
Carub.0007s0758 Capsella rubella HOM05D004619 ORTHO05D005738 1.3e-37 161.0 230 40.4
CiPaw.07G204000 Carya illinoinensis HOM05D004619 ORTHO05D005738 1.3e-37 161.0 188 42.6
CDE02G4285 Ceratophyllum demersum HOM05D004619 ORTHO05D005738 1.3e-37 161.0 214 42.1
Nn8g39783 Nelumbo nucifera HOM05D004619 ORTHO05D005738 1.3e-37 161.0 208 42.3
PSO210G5473 Papaver somniferum HOM05D004619 ORTHO05D005738 1.3e-37 161.0 222 40.1
AL7G18800 Arabidopsis lyrata HOM05D004619 ORTHO05D005738 1.7e-37 160.6 230 39.6
Atru.chr7.2086 Acer truncatum HOM05D004619 ORTHO05D005738 2.8e-37 159.8 211 41.2
A01p05370 Brassica napus HOM05D004619 ORTHO05D005738 2.8e-37 159.8 231 39.4
AT4G32910 Arabidopsis thaliana HOM05D004619 ORTHO05D005738 8.3e-37 158.3 209 42.6
CAN.G400.8 Capsicum annuum HOM05D004619 ORTHO05D005738 8.3e-37 158.3 224 42.9
Ah.10g035010 Amaranthus hybridus HOM05D004619 ORTHO05D005738 1.1e-36 157.9 218 39.9
EL10Ac2g04016 Beta vulgaris HOM05D004619 ORTHO05D005738 2.4e-36 156.8 234 38.5
MELO3C011139.2 Cucumis melo HOM05D004619 ORTHO05D005738 3.5e-35 152.9 216 40.3
HPP92_005572 Vanilla planifolia HOM05D004619 ORTHO05D005738 5.9e-35 152.1 206 43.2
Cc08_g09590 Coffea canephora HOM05D004619 ORTHO05D005738 7.7e-35 151.8 206 39.8
Actinidia14677 Actinidia chinensis HOM05D004619 ORTHO05D005738 5.0e-34 149.1 216 38.9
Lsat_1_v5_gn_6_23120 Lactuca sativa HOM05D004619 ORTHO05D005738 6.5e-34 148.7 235 40.4
DCAR_004468 Daucus carota HOM05D004619 ORTHO05D005738 1.1e-33 147.9 220 36.8
SHI18685 Sapria himalayana HOM05D004619 ORTHO05D005738 1.1e-33 147.9 228 39.9
HanXRQChr13g0402061 Helianthus annuus HOM05D004619 ORTHO05D005738 1.5e-33 147.5 210 41.0
Rhsim07G0146900 Rhododendron simsii HOM05D004619 ORTHO05D005738 1.5e-33 147.5 228 37.3
Sabra18G0044100 Salix brachista HOM05D004619 ORTHO05D005738 1.9e-33 147.1 153 47.7
Sabra18G0044200 Salix brachista HOM05D004619 ORTHO05D005738 7.2e-33 145.2 149 48.3
vmacro05371 Vaccinium macrocarpon HOM05D004619 ORTHO05D005738 1.5e-30 137.5 291 33.0
vmacro23276 Vaccinium macrocarpon HOM05D004619 ORTHO05D005738 1.5e-30 137.5 291 33.0
AUR62039705 Chenopodium quinoa HOM05D004619 ORTHO05D005738 2.6e-30 136.7 148 45.3
ECA233G0099 Erigeron canadensis HOM05D004619 ORTHO05D005738 2.6e-30 136.7 220 37.3
AUR62009276 Chenopodium quinoa HOM05D004619 ORTHO05D005738 4.4e-30 136.0 213 37.1
Psat7g196840 Pisum sativum HOM05D004619 ORTHO05D005738 3.3e-25 119.8 102 53.9
Hund19512 Selenicereus undatus HOM05D004619 ORTHO05D005738 5.6e-25 119.0 114 49.1
Haze_21890 Corylus avellana HOM05D004619 ORTHO05D005738 7.3e-25 118.6 214 35.0
unitig_578.g16586 Utricularia gibba HOM05D004619 ORTHO05D005738 3.6e-24 116.3 204 34.8
Dinv27905 Davidia involucrata HOM05D004619 ORTHO05D005738 4.0e-23 112.8 101 51.5
Actinidia15739 Actinidia chinensis HOM05D004619 ORTHO05D005738 1.6e-19 100.9 198 32.8
CBR_g55394 Chara braunii HOM05D004619 ORTHO05D005738 2.0e-19 100.5 163 36.2
Cpa.g.sc78.1 Carica papaya HOM05D004619 ORTHO05D005738 6.6e-10 68.9 71 46.5
arahy.Tifrunner.gnm1.ann1.2KYU87 Arachis hypogaea HOM05D004619 ORTHO05D005738 1.4e-07 61.2 49 57.1
arahy.Tifrunner.gnm1.ann1.VKWI5R Arachis hypogaea HOM05D004619 ORTHO05D005738 1.4e-07 61.2 49 57.1
arahy.Tifrunner.gnm1.ann1.7I309S Arachis hypogaea HOM05D004619 ORTHO05D005738 6.8e-07 58.9 49 55.1
Lsat_1_v5_gn_4_165860 Lactuca sativa HOM05D004619 ORTHO05D005738 1.5e-06 57.8 92 38.0


User provided reference genes

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