Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO157G0012 Selaginella moellendorffii HOM05D005018 ORTHO05D023562 0.0e+00 1268.1 627 100.0
SMO139G0025 Selaginella moellendorffii HOM05D005018 ORTHO05D023562 0.0e+00 1078.5 662 84.6
AagrBONN_evm.TU.Sc2ySwM_368.2465 Anthoceros agrestis HOM05D005018 ORTHO05D023562 9.4e-108 395.2 477 46.8
SMO157G0004 Selaginella moellendorffii HOM05D005018 ORTHO05D023562 2.1e-107 394.0 400 55.2
SMO163G0033 Selaginella moellendorffii HOM05D005018 ORTHO05D023562 3.2e-63 247.3 463 37.4
SMO139G0120 Selaginella moellendorffii HOM05D005018 ORTHO05D006786 6.4e-48 196.4 106 95.3
Mapoly0069s0053 Marchantia polymorpha HOM05D005018 ORTHO05D006786 2.0e-41 174.9 109 81.7
Pp3c16_24810 Physcomitrium patens HOM05D005018 ORTHO05D006786 7.6e-41 172.9 224 48.7
AagrBONN_evm.TU.Sc2ySwM_344.2451 Anthoceros agrestis HOM05D005018 ORTHO05D006786 1.1e-39 169.1 106 78.3
Aa31sc255G10 Aethionema arabicum HOM05D005018 ORTHO05D006786 3.5e-38 164.1 106 75.5
CBR_g18682 Chara braunii HOM05D005018 ORTHO05D006786 3.5e-38 164.1 106 76.4
BraA03t13631Z Brassica rapa HOM05D005018 ORTHO05D006786 4.6e-38 163.7 113 72.6
BcaC01g03124 Brassica carinata HOM05D005018 ORTHO05D006786 7.8e-38 162.9 106 75.5
A03p44940 Brassica napus HOM05D005018 ORTHO05D006786 7.8e-38 162.9 106 75.5
C03p55820 Brassica napus HOM05D005018 ORTHO05D006786 7.8e-38 162.9 106 75.5
BolC3t17863H Brassica oleracea HOM05D005018 ORTHO05D006786 7.8e-38 162.9 106 75.5
BcaB08g34530 Brassica carinata HOM05D005018 ORTHO05D006786 1.0e-37 162.5 106 75.5
Nitab4.5_0006307g0020 Nicotiana tabacum HOM05D005018 ORTHO05D006786 1.0e-37 162.5 106 74.5
Sp3g26900 Schrenkiella parvula HOM05D005018 ORTHO05D006786 1.0e-37 162.5 106 74.5
ATR0730G013 Amborella trichopoda HOM05D005018 ORTHO05D006786 1.3e-37 162.2 106 77.4
CAN.G410.44 Capsicum annuum HOM05D005018 ORTHO05D006786 1.3e-37 162.2 106 73.6
Sopen01g030230 Solanum pennellii HOM05D005018 ORTHO05D006786 1.3e-37 162.2 106 73.6
Carub.0003s2795 Capsella rubella HOM05D005018 ORTHO05D006786 1.7e-37 161.8 106 74.5
Nitab4.5_0000316g0160 Nicotiana tabacum HOM05D005018 ORTHO05D006786 1.7e-37 161.8 106 74.5
Thhalv10022575m.g Eutrema salsugineum HOM05D005018 ORTHO05D006786 2.3e-37 161.4 106 74.5
Os01g0960300 Oryza sativa ssp. japonica HOM05D005018 ORTHO05D006786 2.3e-37 161.4 106 77.4
AT2G13440 Arabidopsis thaliana HOM05D005018 ORTHO05D006786 6.6e-37 159.8 106 72.6
CARHR104850 Cardamine hirsuta HOM05D005018 ORTHO05D006786 6.6e-37 159.8 106 72.6
AL3G45320 Arabidopsis lyrata HOM05D005018 ORTHO05D006786 1.5e-36 158.7 106 71.7
DCAR_018989 Daucus carota HOM05D005018 ORTHO05D006786 1.9e-36 158.3 106 72.6
Peaxi162Scf00087g00314 Petunia axillaris HOM05D005018 ORTHO05D006786 1.9e-36 158.3 106 74.5
Manes.02G085200 Manihot esculenta HOM05D005018 ORTHO05D006786 3.3e-36 157.5 106 74.5
THA.LOC104804457 Tarenaya hassleriana HOM05D005018 ORTHO05D006786 3.3e-36 157.5 106 72.6
Cpa.g.sc42.187 Carica papaya HOM05D005018 ORTHO05D006786 4.3e-36 157.1 106 73.6
Hund28182 Selenicereus undatus HOM05D005018 ORTHO05D006786 4.3e-36 157.1 106 74.5
Hund28185 Selenicereus undatus HOM05D005018 ORTHO05D006786 4.3e-36 157.1 106 74.5
PGR119G0715 Punica granatum HOM05D005018 ORTHO05D006786 5.6e-36 156.8 106 74.5
AUR62006851 Chenopodium quinoa HOM05D005018 ORTHO05D006786 7.3e-36 156.4 106 74.5
Migut.D00797 Erythranthe guttata HOM05D005018 ORTHO05D006786 7.3e-36 156.4 106 75.5
Eucgr.I00131 Eucalyptus grandis HOM05D005018 ORTHO05D006786 7.3e-36 156.4 106 75.5
Ah.06g190950 Amaranthus hybridus HOM05D005018 ORTHO05D006786 1.6e-35 155.2 113 69.0
Sabra05G0054700 Salix brachista HOM05D005018 ORTHO05D006786 1.6e-35 155.2 106 73.6
TAR625G0766 Trochodendron aralioides HOM05D005018 ORTHO05D006786 1.6e-35 155.2 106 72.6
Gohir.A09G005200 Gossypium hirsutum HOM05D005018 ORTHO05D006786 2.1e-35 154.8 148 57.4
Gohir.D09G004500 Gossypium hirsutum HOM05D005018 ORTHO05D006786 2.1e-35 154.8 148 57.4
Gorai.006G006100 Gossypium raimondii HOM05D005018 ORTHO05D006786 2.1e-35 154.8 148 57.4
Nn5g28451 Nelumbo nucifera HOM05D005018 ORTHO05D006786 2.1e-35 154.8 106 72.6
Prupe.5G002000 Prunus persica HOM05D005018 ORTHO05D006786 2.1e-35 154.8 106 72.6
FvH4_7g05150 Fragaria vesca HOM05D005018 ORTHO05D006786 2.8e-35 154.5 106 70.8
MD02G1260800 Malus domestica HOM05D005018 ORTHO05D006786 2.8e-35 154.5 106 71.7
SalBow6G7214 Salvia bowleyana HOM05D005018 ORTHO05D006786 2.8e-35 154.5 106 74.5
Duzib264G1136 Durio zibethinus HOM05D005018 ORTHO05D006786 3.6e-35 154.1 148 56.8
Potri.005G066300 Populus trichocarpa HOM05D005018 ORTHO05D006786 3.6e-35 154.1 106 72.6
Ca_17625_v3 Cicer arietinum L. HOM05D005018 ORTHO05D006786 4.7e-35 153.7 148 58.1
Ciclev10003172m.g Citrus clementina HOM05D005018 ORTHO05D006786 4.7e-35 153.7 106 72.6
MD07G1060700 Malus domestica HOM05D005018 ORTHO05D006786 4.7e-35 153.7 106 71.7
Lalb_Chr07g0184291 Lupinus albus HOM05D005018 ORTHO05D006786 6.2e-35 153.3 106 72.6
Sed0008983 Sechium edule HOM05D005018 ORTHO05D006786 6.2e-35 153.3 106 72.6
arahy.Tifrunner.gnm1.ann1.IZT9KT Arachis hypogaea HOM05D005018 ORTHO05D006786 8.1e-35 152.9 106 73.6
arahy.Tifrunner.gnm1.ann1.YY52IF Arachis hypogaea HOM05D005018 ORTHO05D006786 8.1e-35 152.9 106 73.6
MSTRG.21275 Avicennia marina HOM05D005018 ORTHO05D006786 8.1e-35 152.9 106 73.6
Psat7g044640 Pisum sativum HOM05D005018 ORTHO05D006786 8.1e-35 152.9 106 72.6
Medtr8g094030 Medicago truncatula HOM05D005018 ORTHO05D006786 1.1e-34 152.5 106 73.6
Thecc.01G136300 Theobroma cacao HOM05D005018 ORTHO05D006786 1.1e-34 152.5 148 56.8
TPR.G37346 Trifolium pratense HOM05D005018 ORTHO05D006786 1.1e-34 152.5 113 69.0
Atru.chr4.947 Acer truncatum HOM05D005018 ORTHO05D006786 1.8e-34 151.8 106 72.6
TWI79G0394 Tripterygium wilfordii HOM05D005018 ORTHO05D006786 1.8e-34 151.8 106 72.6
RcHm_v2.0_Chr1g0331701 Rosa chinensis HOM05D005018 ORTHO05D006786 2.4e-34 151.4 106 68.9
CANSAT01G0968 Cannabis sativa HOM05D005018 ORTHO05D006786 3.1e-34 151.0 106 70.8
Cfa002185 Carpinus fangiana HOM05D005018 ORTHO05D006786 3.1e-34 151.0 106 70.8
CiPaw.03G118700 Carya illinoinensis HOM05D005018 ORTHO05D006786 3.1e-34 151.0 106 70.8
Lj4g0009092 Lotus japonicus HOM05D005018 ORTHO05D006786 3.1e-34 151.0 148 56.8
VMungo0251G2317 Vigna mungo HOM05D005018 ORTHO05D006786 3.1e-34 151.0 106 71.7
MELO3C024598.2 Cucumis melo HOM05D005018 ORTHO05D006786 4.0e-34 150.6 148 56.1
Dinv15533 Davidia involucrata HOM05D005018 ORTHO05D006786 4.0e-34 150.6 106 69.8
Glyma.08G001700 Glycine max HOM05D005018 ORTHO05D006786 4.0e-34 150.6 106 71.7
Glyma.05G193600 Glycine max HOM05D005018 ORTHO05D006786 6.9e-34 149.8 106 71.7
HPP92_016130 Vanilla planifolia HOM05D005018 ORTHO05D006786 6.9e-34 149.8 106 71.7
Aqoxy6G00298 Aquilegia oxysepala HOM05D005018 ORTHO05D006786 8.9e-34 149.4 106 73.6
Actinidia06572 Actinidia chinensis HOM05D005018 ORTHO05D006786 1.2e-33 149.1 106 70.8
EL10Ac4g09610 Beta vulgaris HOM05D005018 ORTHO05D006786 1.2e-33 149.1 106 68.9
CsaV3_6G041220 Cucumis sativus L. HOM05D005018 ORTHO05D006786 1.2e-33 149.1 106 71.7
FAN03G0747 Fragaria x ananassa HOM05D005018 ORTHO05D006786 1.2e-33 149.1 108 69.4
FAN06G2729 Fragaria x ananassa HOM05D005018 ORTHO05D006786 1.2e-33 149.1 108 69.4
CSS0009965 Camellia sinensis var. sinensis HOM05D005018 ORTHO05D006786 3.4e-33 147.5 113 67.3
CSS0041776 Camellia sinensis var. sinensis HOM05D005018 ORTHO05D006786 3.4e-33 147.5 113 67.3
HanXRQChr03g0092941 Helianthus annuus HOM05D005018 ORTHO05D006786 4.4e-33 147.1 141 58.2
Sc09g0002290 Simmondsia chinensis HOM05D005018 ORTHO05D006786 4.4e-33 147.1 101 70.3
ECA240G3046 Erigeron canadensis HOM05D005018 ORTHO05D006786 7.6e-33 146.4 105 70.5
Rhsim12G0009100 Rhododendron simsii HOM05D005018 ORTHO05D006786 2.2e-32 144.8 109 69.7
MCO09G341 Micromonas commoda HOM05D005018 ORTHO05D006786 2.9e-32 144.4 108 66.7
Cre10.g428678 Chlamydomonas reinhardtii HOM05D005018 ORTHO05D006786 1.9e-31 141.7 105 70.5
MD07G1060500 Malus domestica HOM05D005018 ORTHO05D006786 1.9e-31 141.7 126 60.3
QL10p041655 Quercus lobata HOM05D005018 ORTHO05D006786 5.4e-31 140.2 126 59.5
QL10p041885 Quercus lobata HOM05D005018 ORTHO05D006786 5.4e-31 140.2 126 59.5
vmacro23049 Vaccinium macrocarpon HOM05D005018 ORTHO05D006786 9.3e-31 139.4 115 65.2
Lsat_1_v5_gn_3_126721 Lactuca sativa HOM05D005018 ORTHO05D006786 1.6e-30 138.7 120 62.5
PRCOL_00006684 Prasinoderma coloniale HOM05D005018 ORTHO05D006786 1.6e-30 138.7 105 66.7
MBI03_g13501_MAGBIO Magnolia biondii HOM05D005018 ORTHO05D006786 2.7e-30 137.9 106 69.8
SGA_v2.0_scaffold5G02934 Striga asiatica HOM05D005018 ORTHO05D006786 2.7e-30 137.9 144 55.6
GSVIVG01026449001 Vitis vinifera HOM05D005018 ORTHO05D006786 4.0e-26 124.0 98 65.3
Solyc01g068290.4 Solanum lycopersicum HOM05D005018 ORTHO05D006786 4.5e-25 120.6 80 71.2
ClCG01G015110 Citrullus lanatus HOM05D005018 ORTHO05D006786 8.4e-24 116.3 106 61.3
unitig_0.g220 Utricularia gibba HOM05D005018 ORTHO05D006786 1.6e-22 112.1 81 67.9
FAN10G3591 Fragaria x ananassa HOM05D005018 ORTHO05D006786 3.5e-22 110.9 81 65.4
COL.COLO4_35799 Corchorus olitorius HOM05D005018 ORTHO05D006786 6.0e-22 110.2 74 71.6
Oeu026685.1 Olea europaea HOM05D005018 ORTHO05D006786 1.8e-18 98.6 64 73.4
Haze_25309 Corylus avellana HOM05D005018 ORTHO05D006786 4.0e-18 97.4 64 71.9
Cc02_g29440 Coffea canephora HOM05D005018 ORTHO05D006786 1.2e-17 95.9 64 71.9
Lj2A615G13 Lonicera japonica HOM05D005018 ORTHO05D006786 1.2e-17 95.9 64 71.9
Oeu006102.4 Olea europaea HOM05D005018 ORTHO05D006786 1.5e-17 95.5 63 73.0
Zm00001eb132400 Zea mays HOM05D005018 ORTHO05D006786 3.4e-17 94.4 66 71.2
SEGI_06865 Sequoiadendron giganteum HOM05D005018 ORTHO05D006786 2.3e-13 81.6 54 72.2
Phvul.002G274000 Phaseolus vulgaris HOM05D005018 ORTHO05D006786 3.0e-13 81.3 106 49.1
Eucgr.I00140 Eucalyptus grandis HOM05D005018 ORTHO05D006786 5.6e-12 77.0 54 70.4
SMO119G0444 Selaginella moellendorffii HOM05D005018 ORTHO05D377834 2.4e-10 71.6 113 41.6
Ca_28668_v3 Cicer arietinum L. HOM05D005018 ORTHO05D006786 9.0e-10 69.7 100 42.0
Zm00001eb319120 Zea mays HOM05D005018 ORTHO05D006786 3.4e-09 67.8 46 78.3
CBR_g53605 Chara braunii HOM05D030759 ORTHO05D000184 4.5e-09 67.4 202 26.2
Haze_26659 Corylus avellana HOM05D005018 ORTHO05D006786 1.2e-06 59.3 115 31.3
Haze_26929 Corylus avellana HOM05D005018 ORTHO05D006786 7.9e-06 56.6 104 35.6


User provided reference genes

Program Settings