Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO145G0011 Selaginella moellendorffii HOM05D005254 ORTHO05D007557 0.0e+00 1326.6 653 100.0
SMO145G0116 Selaginella moellendorffii HOM05D005254 ORTHO05D007557 0.0e+00 1090.1 710 80.7
Mapoly0002s0320 Marchantia polymorpha HOM05D005254 ORTHO05D007557 5.1e-165 585.5 727 44.3
GSVIVG01028140001 Vitis vinifera HOM05D005254 ORTHO05D007557 5.5e-143 512.3 716 41.9
Pp3c14_26400 Physcomitrium patens HOM05D005254 ORTHO05D007557 9.3e-143 511.5 716 40.6
SEGI_30263 Sequoiadendron giganteum HOM05D005254 ORTHO05D007557 1.6e-142 510.8 722 42.0
Ciclev10018561m.g Citrus clementina HOM05D005254 ORTHO05D007557 6.1e-142 508.8 718 41.1
TAR633G1480 Trochodendron aralioides HOM05D005254 ORTHO05D007557 5.1e-141 505.8 716 41.6
Cfa005773 Carpinus fangiana HOM05D005254 ORTHO05D007557 2.6e-137 493.4 716 40.2
Atru.chr5.974 Acer truncatum HOM05D005254 ORTHO05D007557 3.4e-137 493.0 718 39.8
Dinv10118 Davidia involucrata HOM05D005254 ORTHO05D007557 4.5e-137 492.7 717 40.2
ClCG09G004990 Citrullus lanatus HOM05D005254 ORTHO05D007557 7.7e-137 491.9 716 41.6
CiPaw.07G119100 Carya illinoinensis HOM05D005254 ORTHO05D007557 1.3e-136 491.1 716 39.7
FvH4_1g27060 Fragaria vesca HOM05D005254 ORTHO05D007557 1.3e-136 491.1 714 40.1
RcHm_v2.0_Chr3g0487381 Rosa chinensis HOM05D005254 ORTHO05D007557 1.3e-136 491.1 716 40.2
FAN19G0333 Fragaria x ananassa HOM05D005254 ORTHO05D007557 5.0e-136 489.2 714 40.1
FAN26G2945 Fragaria x ananassa HOM05D005254 ORTHO05D007557 8.5e-136 488.4 714 39.9
AagrBONN_evm.TU.Sc2ySwM_344.3074 Anthoceros agrestis HOM05D005254 ORTHO05D007557 7.2e-135 485.3 724 40.2
Gorai.004G144800 Gossypium raimondii HOM05D005254 ORTHO05D007557 2.7e-134 483.4 716 40.4
CsaV3_7G030070 Cucumis sativus L. HOM05D005254 ORTHO05D007557 1.0e-133 481.5 716 40.9
Gohir.D08G140700 Gossypium hirsutum HOM05D005254 ORTHO05D007557 1.0e-133 481.5 716 40.4
Actinidia25861 Actinidia chinensis HOM05D005254 ORTHO05D007557 1.8e-133 480.7 717 40.2
CANSAT25G1517 Cannabis sativa HOM05D005254 ORTHO05D007557 1.8e-133 480.7 716 39.7
Rhsim01G0292000 Rhododendron simsii HOM05D005254 ORTHO05D007557 2.3e-133 480.3 717 40.0
PSO170G0810 Papaver somniferum HOM05D005254 ORTHO05D007557 3.9e-133 479.6 715 40.6
MBI18_g03638_MAGBIO Magnolia biondii HOM05D005254 ORTHO05D007557 5.1e-133 479.2 721 39.7
PSO357G0205 Papaver somniferum HOM05D005254 ORTHO05D007557 5.1e-133 479.2 715 40.6
Haze_05067 Corylus avellana HOM05D005254 ORTHO05D007557 8.8e-133 478.4 716 39.8
Hma1.2p1_0486F.1_g163440 Hydrangea macrophylla HOM05D005254 ORTHO05D007557 8.8e-133 478.4 718 39.6
CSS0038291 Camellia sinensis var. sinensis HOM05D005254 ORTHO05D007557 1.5e-132 477.6 717 40.0
Duzib133G0392 Durio zibethinus HOM05D005254 ORTHO05D007557 1.5e-132 477.6 717 39.6
Gohir.A08G119800 Gossypium hirsutum HOM05D005254 ORTHO05D007557 1.5e-132 477.6 716 40.2
Nn3g21729 Nelumbo nucifera HOM05D005254 ORTHO05D007557 9.7e-132 474.9 716 39.8
Potri.002G194000 Populus trichocarpa HOM05D005254 ORTHO05D007557 9.7e-132 474.9 718 39.4
Sed0001136 Sechium edule HOM05D005254 ORTHO05D007557 9.7e-132 474.9 717 39.9
Hma1.2p1_0486F.1_g163430 Hydrangea macrophylla HOM05D005254 ORTHO05D007557 2.2e-131 473.8 719 39.5
QL12p019422 Quercus lobata HOM05D005254 ORTHO05D007557 2.8e-131 473.4 715 38.7
Aqoxy5G02683 Aquilegia oxysepala HOM05D005254 ORTHO05D007557 6.3e-131 472.2 718 39.3
MD09G1284300 Malus domestica HOM05D005254 ORTHO05D007557 1.1e-130 471.5 715 39.0
Thecc.01G315800 Theobroma cacao HOM05D005254 ORTHO05D007557 1.1e-130 471.5 717 38.8
Sed0015859 Sechium edule HOM05D005254 ORTHO05D007557 3.1e-130 469.9 716 39.5
ATR0693G194 Amborella trichopoda HOM05D005254 ORTHO05D007557 4.1e-130 469.5 716 38.8
PGR083G2196 Punica granatum HOM05D005254 ORTHO05D007557 6.9e-130 468.8 718 38.4
Eucgr.H00999 Eucalyptus grandis HOM05D005254 ORTHO05D007557 1.2e-129 468.0 718 38.6
HanXRQChr01g0000761 Helianthus annuus HOM05D005254 ORTHO05D007557 1.7e-128 464.2 720 40.0
MELO3C015914.2 Cucumis melo HOM05D005254 ORTHO05D007557 8.5e-128 461.8 702 40.6
Migut.N00932 Erythranthe guttata HOM05D005254 ORTHO05D007557 7.2e-127 458.8 717 38.5
Hund09648 Selenicereus undatus HOM05D005254 ORTHO05D007557 7.2e-127 458.8 722 38.0
ECA248G2092 Erigeron canadensis HOM05D005254 ORTHO05D007557 9.4e-127 458.4 717 38.9
Peaxi162Scf00058g02631 Petunia axillaris HOM05D005254 ORTHO05D007557 1.2e-126 458.0 716 38.1
COL.COLO4_23211 Corchorus olitorius HOM05D005254 ORTHO05D007557 2.7e-126 456.8 755 37.0
Manes.05G014200 Manihot esculenta HOM05D005254 ORTHO05D007557 2.7e-126 456.8 720 38.3
Sc17g0000380 Simmondsia chinensis HOM05D005254 ORTHO05D007557 3.6e-126 456.4 718 37.9
MD17G1277500 Malus domestica HOM05D005254 ORTHO05D007557 6.1e-126 455.7 715 37.5
Nitab4.5_0007407g0050 Nicotiana tabacum HOM05D005254 ORTHO05D007557 1.0e-125 454.9 715 38.3
Solyc06g009530.3 Solanum lycopersicum HOM05D005254 ORTHO05D007557 1.4e-125 454.5 716 37.6
Sopen06g004190 Solanum pennellii HOM05D005254 ORTHO05D007557 1.4e-125 454.5 716 37.6
Thhalv10005752m.g Eutrema salsugineum HOM05D005254 ORTHO05D007557 2.3e-125 453.8 716 38.7
SalBow2G1139 Salvia bowleyana HOM05D005254 ORTHO05D007557 3.0e-125 453.4 715 38.2
vmacro15104 Vaccinium macrocarpon HOM05D005254 ORTHO05D007557 3.0e-125 453.4 643 40.7
Nitab4.5_0000363g0240 Nicotiana tabacum HOM05D005254 ORTHO05D007557 6.7e-125 452.2 712 38.1
Carub.0005s2908 Capsella rubella HOM05D005254 ORTHO05D007557 1.5e-124 451.1 716 38.7
Cc01_g21580 Coffea canephora HOM05D005254 ORTHO05D007557 2.0e-124 450.7 720 37.6
TWI36G0433 Tripterygium wilfordii HOM05D005254 ORTHO05D007557 2.6e-124 450.3 716 38.1
A09p54350 Brassica napus HOM05D005254 ORTHO05D007557 4.4e-124 449.5 715 38.7
BraA09t40847Z Brassica rapa HOM05D005254 ORTHO05D007557 7.4e-124 448.7 715 38.7
CARHR172690 Cardamine hirsuta HOM05D005254 ORTHO05D007557 1.3e-123 448.0 716 38.5
DCAR_018280 Daucus carota HOM05D005254 ORTHO05D007557 1.3e-123 448.0 716 37.4
Sp5g01040 Schrenkiella parvula HOM05D005254 ORTHO05D007557 2.8e-123 446.8 717 38.6
CDE01G0437 Ceratophyllum demersum HOM05D005254 ORTHO05D007557 4.1e-122 443.0 715 39.4
FAN28G1559 Fragaria x ananassa HOM05D005254 ORTHO05D007557 5.3e-122 442.6 734 37.6
BolC8t51301H Brassica oleracea HOM05D005254 ORTHO05D007557 7.0e-122 442.2 715 38.2
MSTRG.17387 Avicennia marina HOM05D005254 ORTHO05D007557 9.1e-122 441.8 715 37.9
AL5G45120 Arabidopsis lyrata HOM05D005254 ORTHO05D007557 1.2e-121 441.4 716 38.4
CAN.G1280.35 Capsicum annuum HOM05D005254 ORTHO05D007557 1.2e-121 441.4 716 37.2
Cpa.g.sc18.77 Carica papaya HOM05D005254 ORTHO05D007557 1.2e-121 441.4 632 40.3
C08p37230 Brassica napus HOM05D005254 ORTHO05D007557 1.5e-121 441.0 715 37.9
Lsat_1_v5_gn_5_191360 Lactuca sativa HOM05D005254 ORTHO05D007557 2.0e-121 440.7 717 38.4
CSS0023845 Camellia sinensis var. sinensis HOM05D005254 ORTHO05D007557 3.5e-121 439.9 585 43.6
arahy.Tifrunner.gnm1.ann1.AYF5PU Arachis hypogaea HOM05D005254 ORTHO05D007557 1.0e-120 438.3 716 37.7
Sabra02G0162400 Salix brachista HOM05D005254 ORTHO05D007557 1.0e-120 438.3 774 36.3
Medtr7g109730 Medicago truncatula HOM05D005254 ORTHO05D007557 2.2e-120 437.2 717 38.1
arahy.Tifrunner.gnm1.ann1.72UXVZ Arachis hypogaea HOM05D005254 ORTHO05D007557 2.9e-120 436.8 718 37.5
BcaC07g40720 Brassica carinata HOM05D005254 ORTHO05D007557 2.9e-120 436.8 685 39.1
AT3G62360 Arabidopsis thaliana HOM05D005254 ORTHO05D007557 5.0e-120 436.0 714 38.2
Psat0s425g0240 Pisum sativum HOM05D005254 ORTHO05D007557 5.0e-120 436.0 715 37.2
HPP92_011729 Vanilla planifolia HOM05D005254 ORTHO05D007557 8.5e-120 435.3 719 37.4
Ah.02g112410 Amaranthus hybridus HOM05D005254 ORTHO05D007557 1.5e-119 434.5 720 36.7
Prupe.3G010500 Prunus persica HOM05D005254 ORTHO05D007557 2.5e-119 433.7 582 42.4
THA.LOC104802150 Tarenaya hassleriana HOM05D005254 ORTHO05D007557 2.5e-119 433.7 724 37.3
SGA_v2.0_scaffold6G03340 Striga asiatica HOM05D005254 ORTHO05D007557 3.2e-119 433.3 731 35.7
Phvul.001G214200 Phaseolus vulgaris HOM05D005254 ORTHO05D007557 1.2e-118 431.4 715 37.5
Aa31LG10G16290 Aethionema arabicum HOM05D005254 ORTHO05D007557 2.1e-118 430.6 716 37.7
Ca_09219_v3 Cicer arietinum L. HOM05D005254 ORTHO05D007557 2.1e-118 430.6 716 37.8
Glyma.19G217500 Glycine max HOM05D005254 ORTHO05D007557 2.1e-118 430.6 714 37.7
TPR.G4086 Trifolium pratense HOM05D005254 ORTHO05D007557 1.8e-117 427.6 716 37.8
Lalb_Chr04g0260001 Lupinus albus HOM05D005254 ORTHO05D007557 2.3e-117 427.2 716 37.6
Lj1g0000440 Lotus japonicus HOM05D005254 ORTHO05D007557 5.2e-117 426.0 715 36.9
Glyma.03G220700 Glycine max HOM05D005254 ORTHO05D007557 1.5e-116 424.5 715 37.2
VMungo1383G0540 Vigna mungo HOM05D005254 ORTHO05D007557 2.0e-116 424.1 715 37.2
AUR62043231 Chenopodium quinoa HOM05D005254 ORTHO05D007557 5.7e-116 422.5 758 35.2
Zm00001eb340350 Zea mays HOM05D005254 ORTHO05D007557 3.7e-115 419.9 719 36.2
Lj1C15G16 Lonicera japonica HOM05D005254 ORTHO05D007557 6.3e-115 419.1 512 45.9
Lalb_Chr15g0078051 Lupinus albus HOM05D005254 ORTHO05D007557 9.1e-114 415.2 716 37.2
AUR62032507 Chenopodium quinoa HOM05D005254 ORTHO05D007557 1.2e-108 398.3 727 34.5
EL10As5g23556 Beta vulgaris HOM05D005254 ORTHO05D007557 5.7e-108 396.0 789 33.8
Oeu049924.2 Olea europaea HOM05D005254 ORTHO05D007557 2.4e-98 364.0 640 35.9
BcaC07g40722 Brassica carinata HOM05D005254 ORTHO05D007557 3.8e-96 356.7 718 34.5
CBR_g12556 Chara braunii HOM05D005254 ORTHO05D007557 1.6e-94 351.3 725 33.4
unitig_22.g6696 Utricularia gibba HOM05D005254 ORTHO05D007557 7.5e-92 342.4 733 33.4
FAN23G1589 Fragaria x ananassa HOM05D005254 ORTHO05D007557 7.8e-81 305.8 372 46.2
Oeu031896.1 Olea europaea HOM05D005254 ORTHO05D007557 2.3e-77 294.3 700 31.4
FAN23G1174 Fragaria x ananassa HOM05D005254 ORTHO05D007557 1.4e-69 268.5 393 37.7
Os01g0300600 Oryza sativa ssp. japonica HOM05D005254 ORTHO05D007557 4.0e-61 240.4 370 40.5
C06p28230 Brassica napus HOM05D005254 ORTHO05D007557 2.2e-59 234.6 727 29.3
Actinidia20982 Actinidia chinensis HOM05D005254 ORTHO05D007557 1.4e-53 215.3 397 34.3
BcaC07g42749 Brassica carinata HOM05D005254 ORTHO05D007557 7.1e-50 203.0 309 38.8
BolC6t37993H Brassica oleracea HOM05D005254 ORTHO05D012489 3.1e-45 187.6 370 34.3
BcaC08g45196 Brassica carinata HOM05D005254 ORTHO05D007557 2.9e-43 181.0 517 29.4
SalBow3G0325 Salvia bowleyana HOM05D005254 ORTHO05D007557 2.3e-32 144.8 283 30.0
SalBow2G0161 Salvia bowleyana HOM05D005254 ORTHO05D355854 5.8e-28 130.2 291 28.9
BcaC08g45197 Brassica carinata HOM05D005254 ORTHO05D007557 2.0e-15 88.6 144 36.8
SMO145G0032 Selaginella moellendorffii HOM05D001529 ORTHO05D007595 2.2e-06 58.5 28 92.9


User provided reference genes

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