Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO139G0025 Selaginella moellendorffii HOM05D005018 ORTHO05D023562 0.0e+00 1378.2 685 100.0
SMO157G0012 Selaginella moellendorffii HOM05D005018 ORTHO05D023562 0.0e+00 1078.9 662 84.6
AagrBONN_evm.TU.Sc2ySwM_368.2465 Anthoceros agrestis HOM05D005018 ORTHO05D023562 1.2e-124 451.4 477 50.9
SMO157G0004 Selaginella moellendorffii HOM05D005018 ORTHO05D023562 8.1e-105 385.6 420 52.9
SMO163G0033 Selaginella moellendorffii HOM05D005018 ORTHO05D023562 1.8e-72 278.1 485 38.4
SMO139G0120 Selaginella moellendorffii HOM05D005018 ORTHO05D006786 4.5e-55 220.3 230 57.4
Mapoly0069s0053 Marchantia polymorpha HOM05D005018 ORTHO05D006786 1.0e-46 192.6 230 50.0
Pp3c16_24810 Physcomitrium patens HOM05D005018 ORTHO05D006786 5.0e-46 190.3 306 42.2
AagrBONN_evm.TU.Sc2ySwM_344.2451 Anthoceros agrestis HOM05D005018 ORTHO05D006786 4.2e-45 187.2 181 56.4
CBR_g18682 Chara braunii HOM05D005018 ORTHO05D006786 4.7e-44 183.7 231 47.6
Nitab4.5_0006307g0020 Nicotiana tabacum HOM05D005018 ORTHO05D006786 1.7e-41 175.3 263 43.0
Sopen01g030230 Solanum pennellii HOM05D005018 ORTHO05D006786 1.7e-41 175.3 263 43.0
ATR0730G013 Amborella trichopoda HOM05D005018 ORTHO05D006786 2.8e-41 174.5 181 55.2
Sp3g26900 Schrenkiella parvula HOM05D005018 ORTHO05D006786 2.8e-41 174.5 230 46.1
Aa31sc255G10 Aethionema arabicum HOM05D005018 ORTHO05D006786 3.7e-41 174.1 193 52.3
CAN.G410.44 Capsicum annuum HOM05D005018 ORTHO05D006786 4.8e-41 173.7 263 42.6
BcaC01g03124 Brassica carinata HOM05D005018 ORTHO05D006786 6.3e-41 173.3 230 46.1
A03p44940 Brassica napus HOM05D005018 ORTHO05D006786 6.3e-41 173.3 230 46.1
C03p55820 Brassica napus HOM05D005018 ORTHO05D006786 6.3e-41 173.3 230 46.1
BraA03t13631Z Brassica rapa HOM05D005018 ORTHO05D006786 6.3e-41 173.3 230 46.1
Thhalv10022575m.g Eutrema salsugineum HOM05D005018 ORTHO05D006786 6.3e-41 173.3 230 45.7
BcaB08g34530 Brassica carinata HOM05D005018 ORTHO05D006786 8.3e-41 172.9 230 46.1
AUR62006851 Chenopodium quinoa HOM05D005018 ORTHO05D006786 8.3e-41 172.9 263 44.5
Carub.0003s2795 Capsella rubella HOM05D005018 ORTHO05D006786 1.1e-40 172.6 230 45.7
Medtr8g094030 Medicago truncatula HOM05D005018 ORTHO05D006786 1.1e-40 172.6 230 46.5
Peaxi162Scf00087g00314 Petunia axillaris HOM05D005018 ORTHO05D006786 1.8e-40 171.8 263 43.3
AT2G13440 Arabidopsis thaliana HOM05D005018 ORTHO05D006786 3.1e-40 171.0 230 44.8
CARHR104850 Cardamine hirsuta HOM05D005018 ORTHO05D006786 3.1e-40 171.0 230 44.8
Os01g0960300 Oryza sativa ssp. japonica HOM05D005018 ORTHO05D006786 3.1e-40 171.0 230 45.7
Hund28182 Selenicereus undatus HOM05D005018 ORTHO05D006786 3.1e-40 171.0 191 51.3
Hund28185 Selenicereus undatus HOM05D005018 ORTHO05D006786 3.1e-40 171.0 191 51.3
Ah.06g190950 Amaranthus hybridus HOM05D005018 ORTHO05D006786 4.1e-40 170.6 191 50.3
Nitab4.5_0000316g0160 Nicotiana tabacum HOM05D005018 ORTHO05D006786 4.1e-40 170.6 193 50.3
THA.LOC104804457 Tarenaya hassleriana HOM05D005018 ORTHO05D006786 4.1e-40 170.6 250 44.8
BolC3t17863H Brassica oleracea HOM05D005018 ORTHO05D006786 5.4e-40 170.2 193 51.3
Nn5g28451 Nelumbo nucifera HOM05D005018 ORTHO05D006786 5.4e-40 170.2 263 43.3
PGR119G0715 Punica granatum HOM05D005018 ORTHO05D006786 5.4e-40 170.2 230 46.1
AL3G45320 Arabidopsis lyrata HOM05D005018 ORTHO05D006786 7.0e-40 169.9 230 44.3
DCAR_018989 Daucus carota HOM05D005018 ORTHO05D006786 7.0e-40 169.9 263 42.6
Gohir.D09G004500 Gossypium hirsutum HOM05D005018 ORTHO05D006786 7.0e-40 169.9 263 43.3
Gorai.006G006100 Gossypium raimondii HOM05D005018 ORTHO05D006786 7.0e-40 169.9 263 43.3
Manes.02G085200 Manihot esculenta HOM05D005018 ORTHO05D006786 7.0e-40 169.9 263 43.3
Ciclev10003172m.g Citrus clementina HOM05D005018 ORTHO05D006786 1.2e-39 169.1 263 42.6
Duzib264G1136 Durio zibethinus HOM05D005018 ORTHO05D006786 1.2e-39 169.1 263 43.0
Migut.D00797 Erythranthe guttata HOM05D005018 ORTHO05D006786 1.2e-39 169.1 263 43.3
Prupe.5G002000 Prunus persica HOM05D005018 ORTHO05D006786 1.2e-39 169.1 263 43.0
Cpa.g.sc42.187 Carica papaya HOM05D005018 ORTHO05D006786 1.6e-39 168.7 213 48.8
MD02G1260800 Malus domestica HOM05D005018 ORTHO05D006786 1.6e-39 168.7 263 42.6
Potri.005G066300 Populus trichocarpa HOM05D005018 ORTHO05D006786 1.6e-39 168.7 263 42.6
Aqoxy6G00298 Aquilegia oxysepala HOM05D005018 ORTHO05D006786 2.0e-39 168.3 279 42.7
TAR625G0766 Trochodendron aralioides HOM05D005018 ORTHO05D006786 2.0e-39 168.3 230 44.8
HPP92_016130 Vanilla planifolia HOM05D005018 ORTHO05D006786 2.0e-39 168.3 230 46.1
Eucgr.I00131 Eucalyptus grandis HOM05D005018 ORTHO05D006786 2.7e-39 167.9 180 54.4
Gohir.A09G005200 Gossypium hirsutum HOM05D005018 ORTHO05D006786 2.7e-39 167.9 263 43.0
SalBow6G7214 Salvia bowleyana HOM05D005018 ORTHO05D006786 2.7e-39 167.9 263 43.3
Thecc.01G136300 Theobroma cacao HOM05D005018 ORTHO05D006786 3.5e-39 167.5 263 43.3
arahy.Tifrunner.gnm1.ann1.IZT9KT Arachis hypogaea HOM05D005018 ORTHO05D006786 5.9e-39 166.8 230 45.2
CANSAT01G0968 Cannabis sativa HOM05D005018 ORTHO05D006786 5.9e-39 166.8 263 42.6
FvH4_7g05150 Fragaria vesca HOM05D005018 ORTHO05D006786 5.9e-39 166.8 180 51.7
Psat7g044640 Pisum sativum HOM05D005018 ORTHO05D006786 5.9e-39 166.8 230 44.8
TPR.G37346 Trifolium pratense HOM05D005018 ORTHO05D006786 5.9e-39 166.8 263 42.2
Atru.chr4.947 Acer truncatum HOM05D005018 ORTHO05D006786 1.0e-38 166.0 230 45.7
Sabra05G0054700 Salix brachista HOM05D005018 ORTHO05D006786 1.0e-38 166.0 144 61.8
Sed0008983 Sechium edule HOM05D005018 ORTHO05D006786 1.3e-38 165.6 230 44.8
MD07G1060700 Malus domestica HOM05D005018 ORTHO05D006786 1.7e-38 165.2 249 43.0
TWI79G0394 Tripterygium wilfordii HOM05D005018 ORTHO05D006786 1.7e-38 165.2 219 47.5
Lalb_Chr07g0184291 Lupinus albus HOM05D005018 ORTHO05D006786 2.2e-38 164.9 180 52.2
arahy.Tifrunner.gnm1.ann1.YY52IF Arachis hypogaea HOM05D005018 ORTHO05D006786 2.9e-38 164.5 230 44.8
MSTRG.21275 Avicennia marina HOM05D005018 ORTHO05D006786 3.8e-38 164.1 263 42.6
MELO3C024598.2 Cucumis melo HOM05D005018 ORTHO05D006786 3.8e-38 164.1 263 42.2
ECA240G3046 Erigeron canadensis HOM05D005018 ORTHO05D006786 3.8e-38 164.1 263 43.0
Cfa002185 Carpinus fangiana HOM05D005018 ORTHO05D006786 5.0e-38 163.7 213 47.4
Ca_17625_v3 Cicer arietinum L. HOM05D005018 ORTHO05D006786 5.0e-38 163.7 230 45.2
Dinv15533 Davidia involucrata HOM05D005018 ORTHO05D006786 5.0e-38 163.7 230 43.9
RcHm_v2.0_Chr1g0331701 Rosa chinensis HOM05D005018 ORTHO05D006786 5.0e-38 163.7 180 50.6
EL10Ac4g09610 Beta vulgaris HOM05D005018 ORTHO05D006786 6.5e-38 163.3 263 41.4
Glyma.05G193600 Glycine max HOM05D005018 ORTHO05D006786 6.5e-38 163.3 228 46.1
Glyma.08G001700 Glycine max HOM05D005018 ORTHO05D006786 6.5e-38 163.3 180 51.7
HanXRQChr03g0092941 Helianthus annuus HOM05D005018 ORTHO05D006786 6.5e-38 163.3 263 42.6
Lj4g0009092 Lotus japonicus HOM05D005018 ORTHO05D006786 6.5e-38 163.3 180 51.7
VMungo0251G2317 Vigna mungo HOM05D005018 ORTHO05D006786 6.5e-38 163.3 180 51.7
FAN06G2729 Fragaria x ananassa HOM05D005018 ORTHO05D006786 8.5e-38 162.9 210 46.2
FAN03G0747 Fragaria x ananassa HOM05D005018 ORTHO05D006786 1.1e-37 162.5 210 46.2
Actinidia06572 Actinidia chinensis HOM05D005018 ORTHO05D006786 1.5e-37 162.2 230 44.3
CiPaw.03G118700 Carya illinoinensis HOM05D005018 ORTHO05D006786 1.5e-37 162.2 263 41.4
Cre10.g428678 Chlamydomonas reinhardtii HOM05D005018 ORTHO05D006786 1.5e-37 162.2 226 44.7
MD07G1060500 Malus domestica HOM05D005018 ORTHO05D006786 1.9e-37 161.8 270 41.5
CsaV3_6G041220 Cucumis sativus L. HOM05D005018 ORTHO05D006786 2.5e-37 161.4 263 42.2
MCO09G341 Micromonas commoda HOM05D005018 ORTHO05D006786 3.2e-37 161.0 232 43.5
CSS0009965 Camellia sinensis var. sinensis HOM05D005018 ORTHO05D006786 5.5e-37 160.2 263 42.2
CSS0041776 Camellia sinensis var. sinensis HOM05D005018 ORTHO05D006786 5.5e-37 160.2 263 42.2
PRCOL_00006684 Prasinoderma coloniale HOM05D005018 ORTHO05D006786 8.0e-36 156.4 232 43.1
Rhsim12G0009100 Rhododendron simsii HOM05D005018 ORTHO05D006786 1.8e-35 155.2 266 41.4
SGA_v2.0_scaffold5G02934 Striga asiatica HOM05D005018 ORTHO05D006786 4.0e-35 154.1 347 36.0
Lsat_1_v5_gn_3_126721 Lactuca sativa HOM05D005018 ORTHO05D006786 8.8e-35 152.9 244 42.2
vmacro23049 Vaccinium macrocarpon HOM05D005018 ORTHO05D006786 2.6e-34 151.4 213 46.5
QL10p041655 Quercus lobata HOM05D005018 ORTHO05D006786 3.4e-34 151.0 283 38.5
QL10p041885 Quercus lobata HOM05D005018 ORTHO05D006786 3.4e-34 151.0 283 38.5
Sc09g0002290 Simmondsia chinensis HOM05D005018 ORTHO05D006786 5.7e-34 150.2 183 48.6
MBI03_g13501_MAGBIO Magnolia biondii HOM05D005018 ORTHO05D006786 1.3e-33 149.1 263 41.1
GSVIVG01026449001 Vitis vinifera HOM05D005018 ORTHO05D006786 5.6e-29 133.7 176 46.6
ClCG01G015110 Citrullus lanatus HOM05D005018 ORTHO05D006786 8.0e-28 129.8 233 39.9
Solyc01g068290.4 Solanum lycopersicum HOM05D005018 ORTHO05D006786 3.7e-25 120.9 162 45.1
unitig_0.g220 Utricularia gibba HOM05D005018 ORTHO05D006786 2.9e-22 111.3 163 43.6
COL.COLO4_35799 Corchorus olitorius HOM05D005018 ORTHO05D006786 5.0e-22 110.5 156 44.9
FAN10G3591 Fragaria x ananassa HOM05D005018 ORTHO05D006786 5.0e-22 110.5 141 45.4
Phvul.002G274000 Phaseolus vulgaris HOM05D005018 ORTHO05D006786 1.2e-20 105.9 161 44.7
Zm00001eb132400 Zea mays HOM05D005018 ORTHO05D006786 3.1e-19 101.3 71 70.4
Oeu026685.1 Olea europaea HOM05D005018 ORTHO05D006786 5.2e-19 100.5 110 52.7
Oeu006102.4 Olea europaea HOM05D005018 ORTHO05D006786 1.5e-18 99.0 146 43.8
Cc02_g29440 Coffea canephora HOM05D005018 ORTHO05D006786 2.6e-18 98.2 146 43.8
SEGI_06865 Sequoiadendron giganteum HOM05D005018 ORTHO05D006786 2.6e-18 98.2 127 46.5
Lj2A615G13 Lonicera japonica HOM05D005018 ORTHO05D006786 9.8e-18 96.3 146 43.8
Haze_25309 Corylus avellana HOM05D005018 ORTHO05D006786 3.7e-17 94.4 132 43.2
Eucgr.I00140 Eucalyptus grandis HOM05D005018 ORTHO05D006786 4.3e-13 80.9 167 39.5
Zm00001eb319120 Zea mays HOM05D005018 ORTHO05D006786 3.6e-12 77.8 51 78.4
SMO119G0444 Selaginella moellendorffii HOM05D005018 ORTHO05D377834 2.6e-10 71.6 113 41.6
Ca_28668_v3 Cicer arietinum L. HOM05D005018 ORTHO05D006786 8.3e-09 66.6 100 41.0
Cfa023424 Carpinus fangiana HOM05D005018 ORTHO05D006786 1.4e-08 65.9 155 31.6
Cc02_g29450 Coffea canephora HOM05D005018 ORTHO05D006786 1.9e-08 65.5 107 42.1
Haze_26659 Corylus avellana HOM05D005018 ORTHO05D006786 3.2e-08 64.7 141 30.5
CBR_g53605 Chara braunii HOM05D030759 ORTHO05D000184 9.2e-08 63.2 196 25.0
Haze_26929 Corylus avellana HOM05D005018 ORTHO05D006786 1.2e-07 62.8 189 28.6
Oeu026684.1 Olea europaea HOM05D005018 ORTHO05D006786 2.7e-07 61.6 37 81.1
AagrBONN_evm.TU.Sc2ySwM_362.2338 Anthoceros agrestis HOM05D041239 ORTHO05D031144 5.1e-06 57.4 180 26.7


User provided reference genes

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