Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO119G0513 Selaginella moellendorffii HOM05D006697 ORTHO05D008161 2.4e-223 778.5 385 100.0
Sc23g0000070 Simmondsia chinensis HOM05D006697 ORTHO05D008161 9.1e-37 158.7 218 39.4
Haze_13956 Corylus avellana HOM05D006697 ORTHO05D008161 2.0e-36 157.5 209 39.7
SGA_v2.0_scaffold24G10647 Striga asiatica HOM05D006697 ORTHO05D008161 3.4e-36 156.8 217 40.6
THA.LOC104814608 Tarenaya hassleriana HOM05D006697 ORTHO05D008161 3.4e-36 156.8 219 38.8
QL09p001838 Quercus lobata HOM05D006697 ORTHO05D008161 4.5e-36 156.4 218 37.6
QL11p001773 Quercus lobata HOM05D006697 ORTHO05D008161 1.0e-35 155.2 218 37.6
Thhalv10008579m.g Eutrema salsugineum HOM05D006697 ORTHO05D008161 1.7e-35 154.5 218 38.5
CiPaw.04G009300 Carya illinoinensis HOM05D006697 ORTHO05D008161 2.2e-35 154.1 217 38.2
HPP92_021490 Vanilla planifolia HOM05D006697 ORTHO05D008161 2.2e-35 154.1 218 37.6
Migut.C01379 Erythranthe guttata HOM05D006697 ORTHO05D008161 2.9e-35 153.7 217 37.8
Ah.05g170350 Amaranthus hybridus HOM05D006697 ORTHO05D008161 8.5e-35 152.1 217 38.7
MBI04_g46123_MAGBIO Magnolia biondii HOM05D006697 ORTHO05D008161 1.1e-34 151.8 218 38.1
Dinv22109 Davidia involucrata HOM05D006697 ORTHO05D008161 1.9e-34 151.0 218 36.2
AUR62038532 Chenopodium quinoa HOM05D006697 ORTHO05D008161 3.2e-34 150.2 218 37.6
HPP92_021529 Vanilla planifolia HOM05D006697 ORTHO05D008161 3.2e-34 150.2 218 37.2
Sp1g11350 Schrenkiella parvula HOM05D006697 ORTHO05D008161 4.2e-34 149.8 218 37.2
Sabra16G0248400 Salix brachista HOM05D006697 ORTHO05D008161 5.5e-34 149.4 236 36.9
Aqoxy7G01951 Aquilegia oxysepala HOM05D006697 ORTHO05D008161 7.2e-34 149.1 217 37.3
AL1G24400 Arabidopsis lyrata HOM05D006697 ORTHO05D008161 7.2e-34 149.1 218 38.1
FvH4_2g00851 Fragaria vesca HOM05D006697 ORTHO05D008161 7.2e-34 149.1 218 37.6
Potri.001G377100 Populus trichocarpa HOM05D006697 ORTHO05D008161 7.2e-34 149.1 219 38.4
EL10Ac1g01267 Beta vulgaris HOM05D006697 ORTHO05D008161 1.2e-33 148.3 218 36.2
Hma1.2p1_0417F.1_g148910 Hydrangea macrophylla HOM05D006697 ORTHO05D008161 1.6e-33 147.9 217 37.3
FAN27G1710 Fragaria x ananassa HOM05D006697 ORTHO05D008161 2.1e-33 147.5 218 36.7
Carub.0001s1251 Capsella rubella HOM05D006697 ORTHO05D008161 2.7e-33 147.1 218 36.7
Mapoly0068s0032 Marchantia polymorpha HOM05D006697 ORTHO05D008161 2.7e-33 147.1 218 39.4
TWI12G1402 Tripterygium wilfordii HOM05D006697 ORTHO05D008161 2.7e-33 147.1 218 35.8
Aa31LG2G660 Aethionema arabicum HOM05D006697 ORTHO05D008161 3.6e-33 146.7 225 37.3
CANSAT21G1464 Cannabis sativa HOM05D006697 ORTHO05D008161 3.6e-33 146.7 219 37.9
CANSAT21G1945 Cannabis sativa HOM05D006697 ORTHO05D008161 3.6e-33 146.7 219 37.9
CARHR013100 Cardamine hirsuta HOM05D006697 ORTHO05D008161 6.1e-33 146.0 218 37.2
AUR62013379 Chenopodium quinoa HOM05D006697 ORTHO05D008161 6.1e-33 146.0 218 36.7
AT1G12790 Arabidopsis thaliana HOM05D006697 ORTHO05D008161 1.0e-32 145.2 219 36.5
Actinidia03526 Actinidia chinensis HOM05D006697 ORTHO05D008161 1.4e-32 144.8 230 35.2
GSVIVG01036291001 Vitis vinifera HOM05D006697 ORTHO05D008161 1.8e-32 144.4 210 37.1
Atru.chr13.2506 Acer truncatum HOM05D006697 ORTHO05D008161 2.3e-32 144.1 213 36.2
HanXRQChr08g0227531 Helianthus annuus HOM05D006697 ORTHO05D008161 2.3e-32 144.1 219 37.0
Atru.chr13.2494 Acer truncatum HOM05D006697 ORTHO05D008161 3.0e-32 143.7 213 36.2
Lj5C630T5 Lonicera japonica HOM05D006697 ORTHO05D008161 3.0e-32 143.7 217 34.6
Zm00001eb345090 Zea mays HOM05D006697 ORTHO05D008161 3.9e-32 143.3 217 35.0
PGR044G1078 Punica granatum HOM05D006697 ORTHO05D008161 5.1e-32 142.9 218 36.2
Cpa.g.sc21.84 Carica papaya HOM05D006697 ORTHO05D008161 8.8e-32 142.1 214 37.9
Glyma.11G110500 Glycine max HOM05D006697 ORTHO05D008161 8.8e-32 142.1 218 35.8
RcHm_v2.0_Chr6g0251241 Rosa chinensis HOM05D006697 ORTHO05D008161 8.8e-32 142.1 218 35.8
PSO170G3180 Papaver somniferum HOM05D006697 ORTHO05D008161 2.6e-31 140.6 219 33.8
Lj3g0000289 Lotus japonicus HOM05D006697 ORTHO05D008161 3.3e-31 140.2 219 36.1
Psat1g020920 Pisum sativum HOM05D006697 ORTHO05D008161 3.3e-31 140.2 217 35.9
Ca_26167_v3 Cicer arietinum L. HOM05D006697 ORTHO05D008161 4.4e-31 139.8 213 36.6
Duzib213G0772 Durio zibethinus HOM05D006697 ORTHO05D008161 4.4e-31 139.8 221 34.8
FAN20G2680 Fragaria x ananassa HOM05D006697 ORTHO05D008161 5.7e-31 139.4 206 37.9
TPR.G29429 Trifolium pratense HOM05D006697 ORTHO05D008161 7.4e-31 139.0 217 36.4
arahy.Tifrunner.gnm1.ann1.6HI5DG Arachis hypogaea HOM05D006697 ORTHO05D008161 9.7e-31 138.7 217 36.4
arahy.Tifrunner.gnm1.ann1.L3LJ1W Arachis hypogaea HOM05D006697 ORTHO05D008161 9.7e-31 138.7 217 36.4
CsaV3_2G033200 Cucumis sativus L. HOM05D006697 ORTHO05D008161 9.7e-31 138.7 213 37.1
Medtr2g010410 Medicago truncatula HOM05D006697 ORTHO05D008161 9.7e-31 138.7 213 35.7
Sed0014406 Sechium edule HOM05D006697 ORTHO05D008161 9.7e-31 138.7 217 35.9
BcaC05g25157 Brassica carinata HOM05D000776 ORTHO05D008161 1.3e-30 138.3 211 37.0
C05p10520 Brassica napus HOM05D000776 ORTHO05D008161 1.3e-30 138.3 211 37.0
ClCG11G008450 Citrullus lanatus HOM05D006697 ORTHO05D008161 1.3e-30 138.3 217 35.9
Ciclev10024137m.g Citrus clementina HOM05D006697 ORTHO05D008161 2.2e-30 137.5 209 36.4
VMungo1127G1290 Vigna mungo HOM05D006697 ORTHO05D008161 2.8e-30 137.1 218 35.3
A06p08910 Brassica napus HOM05D000776 ORTHO05D008161 3.7e-30 136.7 222 34.2
BraA06t24084Z Brassica rapa HOM05D000776 ORTHO05D008161 3.7e-30 136.7 222 34.7
Cc10_g08640 Coffea canephora HOM05D006697 ORTHO05D008161 4.8e-30 136.3 212 35.8
COL.COLO4_05203 Corchorus olitorius HOM05D006697 ORTHO05D008161 6.3e-30 136.0 220 34.5
BolC5t29798H Brassica oleracea HOM05D000776 ORTHO05D008161 8.2e-30 135.6 215 37.2
Os05g0588200 Oryza sativa ssp. japonica HOM05D006697 ORTHO05D008161 1.1e-29 135.2 218 34.4
PGR044G1872 Punica granatum HOM05D006697 ORTHO05D008161 1.4e-29 134.8 218 34.9
Phvul.011G017400 Phaseolus vulgaris HOM05D006697 ORTHO05D008161 2.4e-29 134.0 218 33.9
SMO146G0327 Selaginella moellendorffii HOM05D006697 ORTHO05D378159 3.1e-29 133.7 247 38.9
SGA_v2.0_scaffold147G36299 Striga asiatica HOM05D006697 ORTHO05D008161 4.1e-29 133.3 217 37.8
Thecc.08G178500 Theobroma cacao HOM05D006697 ORTHO05D008161 4.1e-29 133.3 221 34.8
BcaC05g25114 Brassica carinata HOM05D006697 ORTHO05D008161 6.9e-29 132.5 202 37.1
PGSC0003DMG400033140 Solanum tuberosum HOM05D006697 ORTHO05D008161 9.1e-29 132.1 220 33.6
arahy.Tifrunner.gnm1.ann1.D2QDKL Arachis hypogaea HOM05D006697 ORTHO05D008161 1.2e-28 131.7 217 34.1
Lj7A235T22 Lonicera japonica HOM05D006697 ORTHO05D008161 1.2e-28 131.7 208 33.2
Hund16916 Selenicereus undatus HOM05D006697 ORTHO05D008161 1.5e-28 131.3 217 35.0
Gorai.009G352800 Gossypium raimondii HOM05D006697 ORTHO05D008161 2.6e-28 130.6 218 34.4
Gohir.D05G329400 Gossypium hirsutum HOM05D006697 ORTHO05D008161 3.4e-28 130.2 218 34.4
Peaxi162Scf00818g00536 Petunia axillaris HOM05D006697 ORTHO05D008161 4.5e-28 129.8 218 33.9
Sopen06g023040 Solanum pennellii HOM05D006697 ORTHO05D008161 4.5e-28 129.8 219 33.3
Manes.02G201500 Manihot esculenta HOM05D006697 ORTHO05D008161 2.9e-27 127.1 215 34.0
TAR625G0361 Trochodendron aralioides HOM05D006697 ORTHO05D008161 2.9e-27 127.1 208 35.6
Nitab4.5_0002654g0040 Nicotiana tabacum HOM05D006697 ORTHO05D008161 6.5e-27 125.9 240 35.0
Solyc06g064560.4 Solanum lycopersicum HOM05D006697 ORTHO05D008161 6.5e-27 125.9 219 33.8
ATR0083G058 Amborella trichopoda HOM05D006697 ORTHO05D008161 8.5e-27 125.6 192 35.4
ECA247G0072 Erigeron canadensis HOM05D006697 ORTHO05D008161 1.4e-26 124.8 208 35.1
vmacro17835 Vaccinium macrocarpon HOM05D006697 ORTHO05D008161 1.4e-26 124.8 229 34.1
SalBow7G2072 Salvia bowleyana HOM05D006697 ORTHO05D008161 2.5e-26 124.0 272 31.6
CAN.G14.56 Capsicum annuum HOM05D006697 ORTHO05D008161 4.2e-26 123.2 212 34.0
Prupe.8G007100 Prunus persica HOM05D006697 ORTHO05D008161 4.2e-26 123.2 216 35.6
MD05G1004600 Malus domestica HOM05D006697 ORTHO05D008161 1.6e-25 121.3 226 32.3
Nn8g39331 Nelumbo nucifera HOM05D006697 ORTHO05D008161 1.6e-25 121.3 214 34.1
vmacro14431 Vaccinium macrocarpon HOM05D006697 ORTHO05D008161 1.4e-24 118.2 256 33.2
DCAR_016528 Daucus carota HOM05D006697 ORTHO05D008161 6.7e-24 115.9 175 33.7
Nitab4.5_0010319g0040 Nicotiana tabacum HOM05D006697 ORTHO05D008161 5.7e-23 112.8 234 33.3
Lj7C240T16 Lonicera japonica HOM05D006697 ORTHO05D008161 3.7e-22 110.2 209 32.5
MD05G1003900 Malus domestica HOM05D006697 ORTHO05D008161 3.7e-22 110.2 174 33.9
CSS0011722 Camellia sinensis var. sinensis HOM05D006697 ORTHO05D008161 5.3e-21 106.3 209 34.4
CAN.G27.3 Capsicum annuum HOM05D006697 ORTHO05D008161 7.0e-21 105.9 187 33.7
CSS0025148 Camellia sinensis var. sinensis HOM05D006697 ORTHO05D008161 1.2e-20 105.1 211 33.6
Glyma.12G014500 Glycine max HOM05D006697 ORTHO05D008161 1.2e-20 105.1 175 33.1
SHI16724 Sapria himalayana HOM05D006697 ORTHO05D008161 2.0e-20 104.4 271 27.3
Eucgr.F04072 Eucalyptus grandis HOM05D006697 ORTHO05D008161 6.5e-19 99.4 149 34.9
Rhsim08G0116200 Rhododendron simsii HOM05D006697 ORTHO05D008161 9.4e-18 95.5 217 30.0
MSTRG.1598 Avicennia marina HOM05D006697 ORTHO05D008161 2.1e-17 94.4 110 41.8
MELO3C029791.2 Cucumis melo HOM05D006697 ORTHO05D008161 2.7e-17 94.0 162 36.4
Lsat_1_v5_gn_1_24901 Lactuca sativa HOM05D006697 ORTHO05D008161 3.3e-15 87.0 159 32.1
unitig_32.g11211 Utricularia gibba HOM05D006697 ORTHO05D008161 3.3e-15 87.0 115 37.4
unitig_32.g11220 Utricularia gibba HOM05D000486 ORTHO05D000375 5.7e-15 86.3 170 32.4
Lalb_Chr01g0000751 Lupinus albus HOM05D006697 ORTHO05D008161 9.7e-15 85.5 128 35.2
arahy.Tifrunner.gnm1.ann1.K2UT7U Arachis hypogaea HOM05D006697 ORTHO05D008161 4.5e-12 76.6 110 36.4
Gohir.A05G328400 Gossypium hirsutum HOM05D006697 ORTHO05D008161 2.2e-11 74.3 140 31.4
arahy.Tifrunner.gnm1.ann1.9U8FPX Arachis hypogaea HOM05D006697 ORTHO05D008161 5.0e-11 73.2 205 29.8
arahy.Tifrunner.gnm1.ann1.GZG3VH Arachis hypogaea HOM05D006697 ORTHO05D008161 2.7e-09 67.4 138 32.6
arahy.Tifrunner.gnm1.ann1.3DZ399 Arachis hypogaea HOM05D006697 ORTHO05D008161 1.0e-08 65.5 213 26.3


User provided reference genes

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