Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO117G0350 Selaginella moellendorffii HOM05D005328 ORTHO05D006049 9.1e-151 537.3 376 100.0
SMO114G0026 Selaginella moellendorffii HOM05D005328 ORTHO05D006049 4.3e-108 395.6 373 70.2
SMO143G0138 Selaginella moellendorffii HOM05D005328 ORTHO05D006049 4.1e-82 309.3 376 68.6
SMO117G0022 Selaginella moellendorffii HOM05D005328 ORTHO05D006049 6.8e-45 185.7 227 62.6
SMO117G0245 Selaginella moellendorffii HOM05D005328 ORTHO05D006049 6.1e-38 162.5 203 65.0
SMO117G0182 Selaginella moellendorffii HOM05D005328 ORTHO05D006049 6.8e-37 159.1 198 61.1
ECA234G3238 Erigeron canadensis HOM05D005328 ORTHO05D006049 2.8e-35 153.7 366 36.6
HanXRQChr17g0558521 Helianthus annuus HOM05D005328 ORTHO05D006049 2.8e-35 153.7 361 46.8
Hma1.2p1_0391F.1_g142830 Hydrangea macrophylla HOM05D005328 ORTHO05D006049 1.8e-34 151.0 362 37.8
Lj6g0010372 Lotus japonicus HOM05D005328 ORTHO05D006049 5.4e-34 149.4 394 35.3
Lsat_1_v5_gn_4_65161 Lactuca sativa HOM05D005328 ORTHO05D006049 2.7e-33 147.1 353 32.6
Eucgr.E04239 Eucalyptus grandis HOM05D005328 ORTHO05D006049 1.3e-32 144.8 399 34.3
Gohir.D02G007001 Gossypium hirsutum HOM05D005328 ORTHO05D006049 1.3e-32 144.8 382 41.6
SGA_v2.0_scaffold7G03648 Striga asiatica HOM05D005328 ORTHO05D006049 1.7e-32 144.4 362 39.0
unitig_748.g7855 Utricularia gibba HOM05D005328 ORTHO05D006049 1.7e-32 144.4 369 37.7
Gohir.A02G007200 Gossypium hirsutum HOM05D005328 ORTHO05D006049 2.3e-32 144.1 383 41.3
COL.COLO4_12851 Corchorus olitorius HOM05D005328 ORTHO05D006049 5.0e-32 142.9 391 40.4
Dinv04372 Davidia involucrata HOM05D005328 ORTHO05D006049 5.0e-32 142.9 394 32.7
Migut.M01485 Erythranthe guttata HOM05D005328 ORTHO05D006049 5.0e-32 142.9 383 42.3
BcaC02g12330 Brassica carinata HOM05D005328 ORTHO05D006049 6.6e-32 142.5 429 31.2
CSS0022453 Camellia sinensis var. sinensis HOM05D005328 ORTHO05D006049 1.1e-31 141.7 394 37.6
Gorai.005G008200 Gossypium raimondii HOM05D005328 ORTHO05D006049 1.1e-31 141.7 383 42.6
Actinidia02271 Actinidia chinensis HOM05D005328 ORTHO05D006049 1.5e-31 141.4 393 36.1
HPP92_007484 Vanilla planifolia HOM05D005328 ORTHO05D006049 1.9e-31 141.0 357 37.8
BraA05t19414Z Brassica rapa HOM05D005328 ORTHO05D006049 2.5e-31 140.6 426 33.1
CAN.G2049.4 Capsicum annuum HOM05D005328 ORTHO05D006049 2.5e-31 140.6 376 36.7
Thecc.04G160200 Theobroma cacao HOM05D005328 ORTHO05D006049 2.5e-31 140.6 389 36.0
BcaB01g03324 Brassica carinata HOM05D005328 ORTHO05D006049 3.3e-31 140.2 375 46.7
Manes.03G095600 Manihot esculenta HOM05D005328 ORTHO05D006049 3.3e-31 140.2 411 33.3
Nitab4.5_0005721g0030 Nicotiana tabacum HOM05D005328 ORTHO05D006049 3.3e-31 140.2 362 37.0
BcaB02g08879 Brassica carinata HOM05D005328 ORTHO05D006049 4.3e-31 139.8 426 33.6
Sc13g0008540 Simmondsia chinensis HOM05D005328 ORTHO05D006049 4.3e-31 139.8 377 33.7
Hund04726 Selenicereus undatus HOM05D005328 ORTHO05D006049 5.6e-31 139.4 416 37.3
BraA03t11679Z Brassica rapa HOM05D005328 ORTHO05D006049 7.3e-31 139.0 415 35.7
A03p24730 Brassica napus HOM05D005328 ORTHO05D006049 9.5e-31 138.7 415 35.7
A05p04290 Brassica napus HOM05D005328 ORTHO05D006049 9.5e-31 138.7 426 33.8
Duzib151G0457 Durio zibethinus HOM05D005328 ORTHO05D006049 9.5e-31 138.7 384 36.5
Rhsim13G0137800 Rhododendron simsii HOM05D005328 ORTHO05D006049 2.8e-30 137.1 379 31.9
C03p29470 Brassica napus HOM05D005328 ORTHO05D006049 4.7e-30 136.3 417 38.6
BcaC01g05181 Brassica carinata HOM05D005328 ORTHO05D006049 1.0e-29 135.2 417 38.4
C04p05070 Brassica napus HOM05D005328 ORTHO05D006049 1.0e-29 135.2 428 32.5
Thhalv10001457m.g Eutrema salsugineum HOM05D005328 ORTHO05D006049 1.0e-29 135.2 407 45.5
PGR042G0801 Punica granatum HOM05D005328 ORTHO05D006049 1.0e-29 135.2 406 35.7
CDE03G0050 Ceratophyllum demersum HOM05D005328 ORTHO05D006049 2.3e-29 134.0 382 33.0
Aa31LG1G25860 Aethionema arabicum HOM05D005328 ORTHO05D006049 4.0e-29 133.3 398 34.2
THA.LOC104804861 Tarenaya hassleriana HOM05D005328 ORTHO05D006049 2.0e-28 131.0 426 34.7
THA.LOC104807080 Tarenaya hassleriana HOM05D005328 ORTHO05D006049 2.0e-28 131.0 426 34.7
AagrBONN_evm.TU.Sc2ySwM_228.5016 Anthoceros agrestis HOM05D005328 ORTHO05D006049 2.2e-27 127.5 133 55.6
Ca_00786_v3 Cicer arietinum L. HOM05D005328 ORTHO05D006049 2.9e-27 127.1 399 37.6
Ca_11373_v3 Cicer arietinum L. HOM05D005328 ORTHO05D006049 2.9e-27 127.1 399 37.6
VMungo0540G0318 Vigna mungo HOM05D005328 ORTHO05D006049 2.9e-27 127.1 451 33.5
Ciclev10015350m.g Citrus clementina HOM05D005328 ORTHO05D006049 6.4e-27 125.9 398 34.4
Sopen02g029040 Solanum pennellii HOM05D005328 ORTHO05D006049 8.3e-27 125.6 405 38.3
AL4G43160 Arabidopsis lyrata HOM05D005328 ORTHO05D006049 1.4e-26 124.8 439 36.7
Phvul.006G134100 Phaseolus vulgaris HOM05D005328 ORTHO05D006049 3.2e-26 123.6 448 32.4
AUR62021212 Chenopodium quinoa HOM05D005328 ORTHO05D006049 5.4e-26 122.9 412 37.6
QL05p066147 Quercus lobata HOM05D005328 ORTHO05D006049 7.0e-26 122.5 399 37.6
TWI63G1825 Tripterygium wilfordii HOM05D005328 ORTHO05D006049 1.6e-25 121.3 408 32.4
Peaxi162Scf00083g00091 Petunia axillaris HOM05D005328 ORTHO05D006049 2.0e-25 120.9 384 44.3
Solyc02g084340.3 Solanum lycopersicum HOM05D005328 ORTHO05D006049 4.6e-25 119.8 422 38.9
TAR626G1462 Trochodendron aralioides HOM05D005328 ORTHO05D006049 1.7e-24 117.9 419 33.2
Potri.006G000200 Populus trichocarpa HOM05D005328 ORTHO05D006049 2.3e-24 117.5 438 33.6
SEGI_06923 Sequoiadendron giganteum HOM05D005328 ORTHO05D006049 3.9e-24 116.7 136 50.7
Cpa.g.sc53.124 Carica papaya HOM05D005328 ORTHO05D006049 5.0e-24 116.3 454 29.3
TPR.G10498 Trifolium pratense HOM05D005328 ORTHO05D006049 1.5e-23 114.8 413 35.4
Pp3c3_9980 Physcomitrium patens HOM05D005328 ORTHO05D006049 1.9e-23 114.4 136 52.9
Sp4g26280 Schrenkiella parvula HOM05D005328 ORTHO05D006049 3.3e-23 113.6 446 36.8
BolC3t15295H Brassica oleracea HOM05D005328 ORTHO05D006049 4.3e-23 113.2 397 37.0
Nitab4.5_0002880g0010 Nicotiana tabacum HOM05D005328 ORTHO05D006049 1.6e-22 111.3 361 35.7
CBR_g2953 Chara braunii HOM05D005328 ORTHO05D006049 6.2e-22 109.4 138 47.8
Glyma.15G123900 Glycine max HOM05D005328 ORTHO05D006049 6.2e-22 109.4 456 30.7
CARHR139360 Cardamine hirsuta HOM05D005328 ORTHO05D006049 8.0e-22 109.0 477 28.9
CiPaw.10G085200 Carya illinoinensis HOM05D005328 ORTHO05D006049 1.0e-21 108.6 395 43.5
Atru.chr1.2204 Acer truncatum HOM05D005328 ORTHO05D006049 1.8e-21 107.8 465 27.7
AT2G44200 Arabidopsis thaliana HOM05D005328 ORTHO05D006049 1.8e-21 107.8 481 32.4
Oeu016925.1 Olea europaea HOM05D005328 ORTHO05D006049 2.3e-21 107.5 440 26.8
Aqoxy6G01137 Aquilegia oxysepala HOM05D005328 ORTHO05D006049 1.5e-20 104.8 511 34.2
vmacro03583 Vaccinium macrocarpon HOM05D005328 ORTHO05D006049 4.4e-20 103.2 426 27.5
Prupe.1G161200 Prunus persica HOM05D005328 ORTHO05D006049 6.4e-19 99.4 139 46.0
MD04G1014200 Malus domestica HOM05D005328 ORTHO05D006049 8.3e-19 99.0 505 32.9
EL10Ac3g05669 Beta vulgaris HOM05D005328 ORTHO05D006049 1.1e-18 98.6 464 33.6
FvH4_4g13451 Fragaria vesca HOM05D005328 ORTHO05D006049 1.1e-18 98.6 138 45.7
FAN12G3626 Fragaria x ananassa HOM05D005328 ORTHO05D006049 1.1e-18 98.6 138 45.7
PGSC0003DMG400003630 Solanum tuberosum HOM05D005328 ORTHO05D006049 1.1e-18 98.6 140 44.3
GSVIVG01018754001 Vitis vinifera HOM05D005328 ORTHO05D006049 1.4e-18 98.2 135 45.2
Glyma.09G018000 Glycine max HOM05D005328 ORTHO05D006049 1.9e-18 97.8 143 44.1
Sed0006700 Sechium edule HOM05D005328 ORTHO05D006049 1.9e-18 97.8 475 27.6
DCAR_022839 Daucus carota HOM05D005328 ORTHO05D006049 2.4e-18 97.4 136 46.3
Carub.0004s2678 Capsella rubella HOM05D005328 ORTHO05D006049 3.2e-18 97.1 145 45.5
FAN22G2230 Fragaria x ananassa HOM05D005328 ORTHO05D006049 3.2e-18 97.1 138 44.9
Medtr2g028200 Medicago truncatula HOM05D005328 ORTHO05D006049 3.2e-18 97.1 477 34.4
THA.LOC104798630 Tarenaya hassleriana HOM05D005328 ORTHO05D006049 3.2e-18 97.1 142 43.7
FAN07G1972 Fragaria x ananassa HOM05D005328 ORTHO05D006049 5.4e-18 96.3 138 47.1
FAN17G2578 Fragaria x ananassa HOM05D005328 ORTHO05D006049 5.4e-18 96.3 138 47.1
MELO3C017635.2 Cucumis melo HOM05D005328 ORTHO05D006049 1.2e-17 95.1 137 44.5
CsaV3_4G004310 Cucumis sativus L. HOM05D005328 ORTHO05D006049 1.2e-17 95.1 137 44.5
Psat1g170800 Pisum sativum HOM05D005328 ORTHO05D006049 1.6e-17 94.7 136 43.4
Os08g0500200 Oryza sativa ssp. japonica HOM05D005328 ORTHO05D006049 3.5e-17 93.6 490 37.3
arahy.Tifrunner.gnm1.ann1.B05UD4 Arachis hypogaea HOM05D005328 ORTHO05D006049 7.8e-17 92.4 438 32.9
AUR62016004 Chenopodium quinoa HOM05D005328 ORTHO05D006049 1.0e-16 92.0 351 38.7
Sabra06G0000700 Salix brachista HOM05D005328 ORTHO05D006049 1.3e-16 91.7 437 28.8
PSO170G6444 Papaver somniferum HOM05D005328 ORTHO05D006049 1.7e-16 91.3 141 43.3
Lalb_Chr15g0088491 Lupinus albus HOM05D005328 ORTHO05D006049 6.6e-16 89.4 479 24.4
PSO017G7149 Papaver somniferum HOM05D005328 ORTHO05D006049 8.6e-16 89.0 481 35.8
ATR0751G111 Amborella trichopoda HOM05D005328 ORTHO05D006049 1.1e-15 88.6 299 38.5
arahy.Tifrunner.gnm1.ann1.QMQM64 Arachis hypogaea HOM05D005328 ORTHO05D006049 1.9e-15 87.8 137 42.3
Mapoly0104s0032 Marchantia polymorpha HOM05D005328 ORTHO05D006049 2.5e-15 87.4 142 44.4
ClCG07G017100 Citrullus lanatus HOM05D005328 ORTHO05D006049 1.6e-14 84.7 396 33.3
Prupe.1G161500 Prunus persica HOM05D005328 ORTHO05D006049 1.6e-14 84.7 104 44.2
CDE06G0152 Ceratophyllum demersum HOM05D005328 ORTHO05D006049 2.1e-14 84.3 104 42.3
Cc09_g00040 Coffea canephora HOM05D005328 ORTHO05D006049 3.6e-14 83.6 540 23.5
RcHm_v2.0_Chr4g0414011 Rosa chinensis HOM05D005328 ORTHO05D006049 6.2e-14 82.8 507 34.1
DCAR_022842 Daucus carota HOM05D005328 ORTHO05D006049 8.1e-14 82.4 95 50.5
SalBow8G1780 Salvia bowleyana HOM05D005328 ORTHO05D006049 1.8e-13 81.3 493 26.0
Zm00001eb034090 Zea mays HOM05D005328 ORTHO05D006049 4.0e-13 80.1 97 44.3
Ah.07g207330 Amaranthus hybridus HOM05D005328 ORTHO05D002024 2.0e-12 77.8 526 26.2
Prupe.1G162300 Prunus persica HOM05D005328 ORTHO05D006049 1.3e-08 65.1 119 40.3
Zm00001eb097520 Zea mays HOM05D005328 ORTHO05D006049 1.3e-08 65.1 112 40.2
Haze_07067 Corylus avellana HOM05D005328 ORTHO05D006049 1.7e-08 64.7 94 43.6
Carub.0004s2677 Capsella rubella HOM05D005328 ORTHO05D006049 6.6e-08 62.8 132 36.4
TAR371G0561 Trochodendron aralioides HOM05D005328 ORTHO05D006049 5.6e-07 59.7 54 55.6
Sabra16G0007800 Salix brachista HOM05D000040 ORTHO05D001305 1.6e-06 58.2 63 46.0
BcaB02g08878 Brassica carinata HOM05D005328 ORTHO05D006049 2.8e-06 57.4 48 56.2
Nn1g08402 Nelumbo nucifera HOM05D005328 ORTHO05D006049 2.8e-06 57.4 362 32.6


User provided reference genes

Program Settings