Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO117G0182 Selaginella moellendorffii HOM05D005328 ORTHO05D006049 1.2e-62 243.4 164 100.0
SMO117G0245 Selaginella moellendorffii HOM05D005328 ORTHO05D006049 1.4e-55 219.9 155 97.4
SMO114G0026 Selaginella moellendorffii HOM05D005328 ORTHO05D006049 7.8e-46 187.6 196 70.4
SMO117G0022 Selaginella moellendorffii HOM05D005328 ORTHO05D006049 7.3e-36 154.5 107 82.2
SMO117G0350 Selaginella moellendorffii HOM05D005328 ORTHO05D006049 9.5e-36 154.1 198 61.1
SMO143G0138 Selaginella moellendorffii HOM05D005328 ORTHO05D006049 8.3e-32 141.0 116 68.1
BcaB01g03324 Brassica carinata HOM05D005328 ORTHO05D006049 5.8e-17 91.7 90 53.3
Migut.M01485 Erythranthe guttata HOM05D005328 ORTHO05D006049 1.3e-16 90.5 109 47.7
BcaB02g08879 Brassica carinata HOM05D005328 ORTHO05D006049 1.7e-16 90.1 100 48.0
BcaC01g05181 Brassica carinata HOM05D005328 ORTHO05D006049 1.7e-16 90.1 91 51.6
A03p24730 Brassica napus HOM05D005328 ORTHO05D006049 1.7e-16 90.1 91 51.6
C03p29470 Brassica napus HOM05D005328 ORTHO05D006049 1.7e-16 90.1 91 51.6
BolC3t15295H Brassica oleracea HOM05D005328 ORTHO05D006049 1.7e-16 90.1 91 51.6
BraA03t11679Z Brassica rapa HOM05D005328 ORTHO05D006049 1.7e-16 90.1 91 51.6
Thhalv10001457m.g Eutrema salsugineum HOM05D005328 ORTHO05D006049 2.9e-16 89.4 100 47.0
AL4G43160 Arabidopsis lyrata HOM05D005328 ORTHO05D006049 4.9e-16 88.6 100 47.0
A05p04290 Brassica napus HOM05D005328 ORTHO05D006049 1.1e-15 87.4 100 49.0
C04p05070 Brassica napus HOM05D005328 ORTHO05D006049 1.1e-15 87.4 100 49.0
BraA05t19414Z Brassica rapa HOM05D005328 ORTHO05D006049 1.1e-15 87.4 100 49.0
AT2G44200 Arabidopsis thaliana HOM05D005328 ORTHO05D006049 1.4e-15 87.0 117 43.6
Sp4g26280 Schrenkiella parvula HOM05D005328 ORTHO05D006049 1.4e-15 87.0 100 48.0
Cc09_g00040 Coffea canephora HOM05D005328 ORTHO05D006049 1.9e-15 86.7 101 48.5
Gohir.D02G007001 Gossypium hirsutum HOM05D005328 ORTHO05D006049 1.9e-15 86.7 91 51.6
BcaC02g12330 Brassica carinata HOM05D005328 ORTHO05D006049 2.4e-15 86.3 100 48.0
CARHR139360 Cardamine hirsuta HOM05D005328 ORTHO05D006049 4.2e-15 85.5 100 47.0
Gorai.005G008200 Gossypium raimondii HOM05D005328 ORTHO05D006049 4.2e-15 85.5 91 51.6
Gohir.A02G007200 Gossypium hirsutum HOM05D005328 ORTHO05D006049 5.4e-15 85.1 91 51.6
SEGI_06923 Sequoiadendron giganteum HOM05D005328 ORTHO05D006049 7.1e-15 84.7 98 50.0
PGR042G0801 Punica granatum HOM05D005328 ORTHO05D006049 2.1e-14 83.2 103 48.5
Dinv04372 Davidia involucrata HOM05D005328 ORTHO05D006049 2.7e-14 82.8 92 48.9
Aa31LG1G25860 Aethionema arabicum HOM05D005328 ORTHO05D006049 3.5e-14 82.4 100 46.0
Manes.03G095600 Manihot esculenta HOM05D005328 ORTHO05D006049 4.6e-14 82.0 97 48.5
SGA_v2.0_scaffold7G03648 Striga asiatica HOM05D005328 ORTHO05D006049 6.0e-14 81.6 108 45.4
MD04G1014200 Malus domestica HOM05D005328 ORTHO05D006049 1.0e-13 80.9 110 44.5
COL.COLO4_12851 Corchorus olitorius HOM05D005328 ORTHO05D006049 1.3e-13 80.5 99 46.5
ECA234G3238 Erigeron canadensis HOM05D005328 ORTHO05D006049 1.3e-13 80.5 98 45.9
Lsat_1_v5_gn_4_65161 Lactuca sativa HOM05D005328 ORTHO05D006049 1.3e-13 80.5 114 43.9
Sed0006700 Sechium edule HOM05D005328 ORTHO05D006049 1.3e-13 80.5 98 44.9
Duzib151G0457 Durio zibethinus HOM05D005328 ORTHO05D006049 3.0e-13 79.3 100 47.0
HanXRQChr17g0558521 Helianthus annuus HOM05D005328 ORTHO05D006049 3.0e-13 79.3 104 44.2
RcHm_v2.0_Chr4g0414011 Rosa chinensis HOM05D005328 ORTHO05D006049 3.0e-13 79.3 92 48.9
SalBow8G1780 Salvia bowleyana HOM05D005328 ORTHO05D006049 3.0e-13 79.3 89 46.1
Thecc.04G160200 Theobroma cacao HOM05D005328 ORTHO05D006049 3.0e-13 79.3 100 47.0
Solyc02g084340.3 Solanum lycopersicum HOM05D005328 ORTHO05D006049 3.9e-13 79.0 91 48.4
Hma1.2p1_0391F.1_g142830 Hydrangea macrophylla HOM05D005328 ORTHO05D006049 5.1e-13 78.6 113 43.4
Sopen02g029040 Solanum pennellii HOM05D005328 ORTHO05D006049 5.1e-13 78.6 91 48.4
PGSC0003DMG400003630 Solanum tuberosum HOM05D005328 ORTHO05D006049 5.1e-13 78.6 91 48.4
Aqoxy6G01137 Aquilegia oxysepala HOM05D005328 ORTHO05D006049 6.6e-13 78.2 115 43.5
unitig_748.g7855 Utricularia gibba HOM05D005328 ORTHO05D006049 6.6e-13 78.2 100 45.0
CAN.G2049.4 Capsicum annuum HOM05D005328 ORTHO05D006049 8.7e-13 77.8 98 45.9
FAN07G1972 Fragaria x ananassa HOM05D005328 ORTHO05D006049 8.7e-13 77.8 93 51.6
FAN22G2230 Fragaria x ananassa HOM05D005328 ORTHO05D006049 8.7e-13 77.8 93 51.6
VMungo0540G0318 Vigna mungo HOM05D005328 ORTHO05D006049 8.7e-13 77.8 103 46.6
Actinidia02271 Actinidia chinensis HOM05D005328 ORTHO05D006049 1.1e-12 77.4 112 43.8
DCAR_022842 Daucus carota HOM05D005328 ORTHO05D006049 1.1e-12 77.4 99 47.5
Peaxi162Scf00083g00091 Petunia axillaris HOM05D005328 ORTHO05D006049 1.1e-12 77.4 98 45.9
Eucgr.E04239 Eucalyptus grandis HOM05D005328 ORTHO05D006049 1.5e-12 77.0 119 42.9
Oeu016925.1 Olea europaea HOM05D005328 ORTHO05D006049 1.5e-12 77.0 100 44.0
TAR626G1462 Trochodendron aralioides HOM05D005328 ORTHO05D006049 1.5e-12 77.0 110 44.5
AUR62016004 Chenopodium quinoa HOM05D005328 ORTHO05D006049 1.9e-12 76.6 100 45.0
Lj6g0010372 Lotus japonicus HOM05D005328 ORTHO05D006049 1.9e-12 76.6 100 45.0
Hund04726 Selenicereus undatus HOM05D005328 ORTHO05D006049 1.9e-12 76.6 103 46.6
EL10Ac3g05669 Beta vulgaris HOM05D005328 ORTHO05D006049 2.5e-12 76.3 91 48.4
AUR62021212 Chenopodium quinoa HOM05D005328 ORTHO05D006049 2.5e-12 76.3 100 45.0
THA.LOC104804861 Tarenaya hassleriana HOM05D005328 ORTHO05D006049 2.5e-12 76.3 102 43.1
THA.LOC104807080 Tarenaya hassleriana HOM05D005328 ORTHO05D006049 2.5e-12 76.3 102 43.1
GSVIVG01018754001 Vitis vinifera HOM05D005328 ORTHO05D006049 3.3e-12 75.9 101 44.6
Phvul.006G134100 Phaseolus vulgaris HOM05D005328 ORTHO05D006049 4.3e-12 75.5 111 43.2
HPP92_007484 Vanilla planifolia HOM05D005328 ORTHO05D006049 4.3e-12 75.5 111 42.3
Ciclev10015350m.g Citrus clementina HOM05D005328 ORTHO05D006049 5.6e-12 75.1 96 45.8
FAN17G2578 Fragaria x ananassa HOM05D005328 ORTHO05D006049 5.6e-12 75.1 93 50.5
CSS0022453 Camellia sinensis var. sinensis HOM05D005328 ORTHO05D006049 7.3e-12 74.7 104 44.2
Rhsim13G0137800 Rhododendron simsii HOM05D005328 ORTHO05D006049 7.3e-12 74.7 101 43.6
Cpa.g.sc53.124 Carica papaya HOM05D005328 ORTHO05D006049 9.6e-12 74.3 102 45.1
Atru.chr1.2204 Acer truncatum HOM05D005328 ORTHO05D006049 1.2e-11 73.9 113 41.6
Potri.006G000200 Populus trichocarpa HOM05D005328 ORTHO05D006049 1.2e-11 73.9 121 40.5
Ah.07g207330 Amaranthus hybridus HOM05D005328 ORTHO05D002024 1.6e-11 73.6 100 44.0
PSO017G7149 Papaver somniferum HOM05D005328 ORTHO05D006049 2.1e-11 73.2 105 41.0
Prupe.1G161500 Prunus persica HOM05D005328 ORTHO05D006049 2.8e-11 72.8 101 41.6
TWI63G1825 Tripterygium wilfordii HOM05D005328 ORTHO05D006049 2.8e-11 72.8 92 44.6
PSO170G6444 Papaver somniferum HOM05D005328 ORTHO05D006049 3.6e-11 72.4 105 41.0
Nitab4.5_0005721g0030 Nicotiana tabacum HOM05D005328 ORTHO05D006049 4.7e-11 72.0 98 43.9
Sc13g0008540 Simmondsia chinensis HOM05D005328 ORTHO05D006049 4.7e-11 72.0 110 40.9
Ca_00786_v3 Cicer arietinum L. HOM05D005328 ORTHO05D006049 6.2e-11 71.6 100 44.0
Ca_11373_v3 Cicer arietinum L. HOM05D005328 ORTHO05D006049 6.2e-11 71.6 100 44.0
FvH4_4g13451 Fragaria vesca HOM05D005328 ORTHO05D006049 6.2e-11 71.6 118 41.5
FAN12G3626 Fragaria x ananassa HOM05D005328 ORTHO05D006049 6.2e-11 71.6 118 41.5
Medtr2g028200 Medicago truncatula HOM05D005328 ORTHO05D006049 8.1e-11 71.2 114 39.5
CDE06G0152 Ceratophyllum demersum HOM05D005328 ORTHO05D006049 1.1e-10 70.9 92 39.1
Glyma.15G123900 Glycine max HOM05D005328 ORTHO05D006049 1.8e-10 70.1 96 44.8
Os08g0500200 Oryza sativa ssp. japonica HOM05D005328 ORTHO05D006049 1.8e-10 70.1 117 41.0
TPR.G10498 Trifolium pratense HOM05D005328 ORTHO05D006049 3.1e-10 69.3 114 38.6
Zm00001eb034090 Zea mays HOM05D005328 ORTHO05D006049 9.0e-10 67.8 93 41.9
CDE03G0050 Ceratophyllum demersum HOM05D005328 ORTHO05D006049 2.6e-09 66.2 110 37.3
Nitab4.5_0002880g0010 Nicotiana tabacum HOM05D005328 ORTHO05D006049 3.8e-08 62.4 70 45.7
Pp3c3_9980 Physcomitrium patens HOM05D005328 ORTHO05D006049 4.9e-08 62.0 107 38.3
Carub.0004s2678 Capsella rubella HOM05D005328 ORTHO05D006049 1.1e-07 60.8 87 40.2
Lalb_Chr15g0088491 Lupinus albus HOM05D005328 ORTHO05D006049 1.1e-07 60.8 115 35.7
vmacro03583 Vaccinium macrocarpon HOM05D005328 ORTHO05D006049 4.2e-07 58.9 77 48.1
QL05p066147 Quercus lobata HOM05D005328 ORTHO05D006049 9.3e-07 57.8 115 39.1
arahy.Tifrunner.gnm1.ann1.QMQM64 Arachis hypogaea HOM05D005328 ORTHO05D006049 3.5e-06 55.8 114 35.1
ATR0751G111 Amborella trichopoda HOM05D005328 ORTHO05D006049 4.6e-06 55.5 112 37.5
arahy.Tifrunner.gnm1.ann1.B05UD4 Arachis hypogaea HOM05D005328 ORTHO05D006049 7.8e-06 54.7 114 34.2


User provided reference genes

Program Settings