Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO117G0022 Selaginella moellendorffii HOM05D005328 ORTHO05D006049 4.1e-151 538.5 375 100.0
SMO114G0026 Selaginella moellendorffii HOM05D005328 ORTHO05D006049 1.5e-57 227.6 267 62.5
SMO143G0138 Selaginella moellendorffii HOM05D005328 ORTHO05D006049 1.7e-43 181.0 119 81.5
SMO117G0350 Selaginella moellendorffii HOM05D005328 ORTHO05D006049 1.8e-42 177.6 227 62.6
SMO117G0182 Selaginella moellendorffii HOM05D005328 ORTHO05D006049 3.4e-36 156.8 107 82.2
SMO117G0245 Selaginella moellendorffii HOM05D005328 ORTHO05D006049 4.7e-30 136.3 251 52.6
Migut.M01485 Erythranthe guttata HOM05D005328 ORTHO05D006049 7.5e-20 102.4 100 54.0
AT2G44200 Arabidopsis thaliana HOM05D005328 ORTHO05D006049 6.4e-19 99.4 114 49.1
BcaB01g03324 Brassica carinata HOM05D005328 ORTHO05D006049 6.4e-19 99.4 93 53.8
BcaB02g08879 Brassica carinata HOM05D005328 ORTHO05D006049 1.1e-18 98.6 94 52.1
AL4G43160 Arabidopsis lyrata HOM05D005328 ORTHO05D006049 1.4e-18 98.2 118 45.8
Thhalv10001457m.g Eutrema salsugineum HOM05D005328 ORTHO05D006049 1.4e-18 98.2 118 46.6
Cc09_g00040 Coffea canephora HOM05D005328 ORTHO05D006049 2.4e-18 97.4 99 51.5
SGA_v2.0_scaffold7G03648 Striga asiatica HOM05D005328 ORTHO05D006049 2.4e-18 97.4 101 52.5
BcaC01g05181 Brassica carinata HOM05D005328 ORTHO05D006049 4.1e-18 96.7 129 42.6
C03p29470 Brassica napus HOM05D005328 ORTHO05D006049 4.1e-18 96.7 129 42.6
BolC3t15295H Brassica oleracea HOM05D005328 ORTHO05D006049 4.1e-18 96.7 129 42.6
Gohir.D02G007001 Gossypium hirsutum HOM05D005328 ORTHO05D006049 4.1e-18 96.7 121 44.6
A03p24730 Brassica napus HOM05D005328 ORTHO05D006049 5.4e-18 96.3 129 42.6
BraA03t11679Z Brassica rapa HOM05D005328 ORTHO05D006049 5.4e-18 96.3 129 42.6
BraA05t19414Z Brassica rapa HOM05D005328 ORTHO05D006049 7.0e-18 95.9 127 46.5
Sp4g26280 Schrenkiella parvula HOM05D005328 ORTHO05D006049 7.0e-18 95.9 118 47.5
Gorai.005G008200 Gossypium raimondii HOM05D005328 ORTHO05D006049 9.2e-18 95.5 121 44.6
Gohir.A02G007200 Gossypium hirsutum HOM05D005328 ORTHO05D006049 1.2e-17 95.1 121 44.6
A05p04290 Brassica napus HOM05D005328 ORTHO05D006049 1.6e-17 94.7 127 45.7
C04p05070 Brassica napus HOM05D005328 ORTHO05D006049 1.6e-17 94.7 127 45.7
SEGI_06923 Sequoiadendron giganteum HOM05D005328 ORTHO05D006049 1.6e-17 94.7 115 49.6
CARHR139360 Cardamine hirsuta HOM05D005328 ORTHO05D006049 2.7e-17 94.0 109 48.6
Hma1.2p1_0391F.1_g142830 Hydrangea macrophylla HOM05D005328 ORTHO05D006049 2.7e-17 94.0 97 51.5
unitig_748.g7855 Utricularia gibba HOM05D005328 ORTHO05D006049 3.5e-17 93.6 113 47.8
BcaC02g12330 Brassica carinata HOM05D005328 ORTHO05D006049 4.6e-17 93.2 119 46.2
Duzib151G0457 Durio zibethinus HOM05D005328 ORTHO05D006049 4.6e-17 93.2 94 53.2
Aa31LG1G25860 Aethionema arabicum HOM05D005328 ORTHO05D006049 5.9e-17 92.8 94 51.1
Dinv04372 Davidia involucrata HOM05D005328 ORTHO05D006049 7.8e-17 92.4 96 49.0
Eucgr.E04239 Eucalyptus grandis HOM05D005328 ORTHO05D006049 1.0e-16 92.0 95 50.5
Lsat_1_v5_gn_4_65161 Lactuca sativa HOM05D005328 ORTHO05D006049 1.0e-16 92.0 107 44.9
Peaxi162Scf00083g00091 Petunia axillaris HOM05D005328 ORTHO05D006049 1.3e-16 91.7 108 47.2
PGR042G0801 Punica granatum HOM05D005328 ORTHO05D006049 1.3e-16 91.7 97 50.5
MD04G1014200 Malus domestica HOM05D005328 ORTHO05D006049 1.7e-16 91.3 95 50.5
Manes.03G095600 Manihot esculenta HOM05D005328 ORTHO05D006049 1.7e-16 91.3 95 51.6
CAN.G2049.4 Capsicum annuum HOM05D005328 ORTHO05D006049 2.3e-16 90.9 98 50.0
COL.COLO4_12851 Corchorus olitorius HOM05D005328 ORTHO05D006049 2.3e-16 90.9 93 50.5
ECA234G3238 Erigeron canadensis HOM05D005328 ORTHO05D006049 2.3e-16 90.9 105 48.6
Solyc02g084340.3 Solanum lycopersicum HOM05D005328 ORTHO05D006049 2.9e-16 90.5 95 50.5
Sopen02g029040 Solanum pennellii HOM05D005328 ORTHO05D006049 3.9e-16 90.1 95 50.5
Aqoxy6G01137 Aquilegia oxysepala HOM05D005328 ORTHO05D006049 5.0e-16 89.7 111 47.7
HanXRQChr17g0558521 Helianthus annuus HOM05D005328 ORTHO05D006049 5.0e-16 89.7 92 48.9
TAR626G1462 Trochodendron aralioides HOM05D005328 ORTHO05D006049 5.0e-16 89.7 96 49.0
Sed0006700 Sechium edule HOM05D005328 ORTHO05D006049 6.6e-16 89.4 98 46.9
PGSC0003DMG400003630 Solanum tuberosum HOM05D005328 ORTHO05D006049 6.6e-16 89.4 97 49.5
AUR62016004 Chenopodium quinoa HOM05D005328 ORTHO05D006049 8.6e-16 89.0 107 47.7
Lj6g0010372 Lotus japonicus HOM05D005328 ORTHO05D006049 8.6e-16 89.0 94 51.1
Phvul.006G134100 Phaseolus vulgaris HOM05D005328 ORTHO05D006049 8.6e-16 89.0 94 52.1
Hund04726 Selenicereus undatus HOM05D005328 ORTHO05D006049 8.6e-16 89.0 116 44.8
Thecc.04G160200 Theobroma cacao HOM05D005328 ORTHO05D006049 8.6e-16 89.0 94 51.1
Oeu016925.1 Olea europaea HOM05D005328 ORTHO05D006049 1.1e-15 88.6 111 45.9
Potri.006G000200 Populus trichocarpa HOM05D005328 ORTHO05D006049 1.5e-15 88.2 95 48.4
DCAR_022842 Daucus carota HOM05D005328 ORTHO05D006049 1.9e-15 87.8 99 50.5
Actinidia02271 Actinidia chinensis HOM05D005328 ORTHO05D006049 2.5e-15 87.4 98 48.0
AUR62021212 Chenopodium quinoa HOM05D005328 ORTHO05D006049 2.5e-15 87.4 107 46.7
Atru.chr1.2204 Acer truncatum HOM05D005328 ORTHO05D006049 3.3e-15 87.0 108 44.4
Nitab4.5_0005721g0030 Nicotiana tabacum HOM05D005328 ORTHO05D006049 4.3e-15 86.7 98 49.0
RcHm_v2.0_Chr4g0414011 Rosa chinensis HOM05D005328 ORTHO05D006049 4.3e-15 86.7 122 43.4
Medtr2g028200 Medicago truncatula HOM05D005328 ORTHO05D006049 5.6e-15 86.3 94 48.9
FAN07G1972 Fragaria x ananassa HOM05D005328 ORTHO05D006049 7.3e-15 85.9 110 49.1
FAN22G2230 Fragaria x ananassa HOM05D005328 ORTHO05D006049 7.3e-15 85.9 110 49.1
SalBow8G1780 Salvia bowleyana HOM05D005328 ORTHO05D006049 7.3e-15 85.9 87 47.1
THA.LOC104804861 Tarenaya hassleriana HOM05D005328 ORTHO05D006049 7.3e-15 85.9 96 46.9
THA.LOC104807080 Tarenaya hassleriana HOM05D005328 ORTHO05D006049 7.3e-15 85.9 96 46.9
VMungo0540G0318 Vigna mungo HOM05D005328 ORTHO05D006049 7.3e-15 85.9 94 51.1
GSVIVG01018754001 Vitis vinifera HOM05D005328 ORTHO05D006049 7.3e-15 85.9 95 48.4
Ah.07g207330 Amaranthus hybridus HOM05D005328 ORTHO05D002024 1.2e-14 85.1 94 48.9
HPP92_007484 Vanilla planifolia HOM05D005328 ORTHO05D006049 1.2e-14 85.1 94 46.8
Cpa.g.sc53.124 Carica papaya HOM05D005328 ORTHO05D006049 2.1e-14 84.3 96 47.9
Ca_00786_v3 Cicer arietinum L. HOM05D005328 ORTHO05D006049 2.1e-14 84.3 94 50.0
Ca_11373_v3 Cicer arietinum L. HOM05D005328 ORTHO05D006049 2.1e-14 84.3 94 50.0
Os08g0500200 Oryza sativa ssp. japonica HOM05D005328 ORTHO05D006049 2.1e-14 84.3 102 49.0
PSO017G7149 Papaver somniferum HOM05D005328 ORTHO05D006049 2.1e-14 84.3 109 41.3
TPR.G10498 Trifolium pratense HOM05D005328 ORTHO05D006049 2.1e-14 84.3 94 48.9
FvH4_4g13451 Fragaria vesca HOM05D005328 ORTHO05D006049 3.6e-14 83.6 109 45.9
FAN12G3626 Fragaria x ananassa HOM05D005328 ORTHO05D006049 3.6e-14 83.6 109 45.9
PSO170G6444 Papaver somniferum HOM05D005328 ORTHO05D006049 3.6e-14 83.6 109 41.3
FAN17G2578 Fragaria x ananassa HOM05D005328 ORTHO05D006049 4.7e-14 83.2 110 48.2
Sc13g0008540 Simmondsia chinensis HOM05D005328 ORTHO05D006049 4.7e-14 83.2 95 46.3
EL10Ac3g05669 Beta vulgaris HOM05D005328 ORTHO05D006049 6.2e-14 82.8 91 49.5
CSS0022453 Camellia sinensis var. sinensis HOM05D005328 ORTHO05D006049 6.2e-14 82.8 96 47.9
CDE06G0152 Ceratophyllum demersum HOM05D005328 ORTHO05D006049 8.0e-14 82.4 122 39.3
Rhsim13G0137800 Rhododendron simsii HOM05D005328 ORTHO05D006049 8.0e-14 82.4 95 46.3
Ciclev10015350m.g Citrus clementina HOM05D005328 ORTHO05D006049 1.0e-13 82.0 94 47.9
Prupe.1G161500 Prunus persica HOM05D005328 ORTHO05D006049 1.4e-13 81.6 120 40.8
CDE03G0050 Ceratophyllum demersum HOM05D005328 ORTHO05D006049 2.3e-13 80.9 95 43.2
Glyma.15G123900 Glycine max HOM05D005328 ORTHO05D006049 4.0e-13 80.1 94 47.9
Zm00001eb034090 Zea mays HOM05D005328 ORTHO05D006049 8.9e-13 79.0 113 42.5
TWI63G1825 Tripterygium wilfordii HOM05D005328 ORTHO05D006049 2.0e-12 77.8 93 44.1
Pp3c3_9980 Physcomitrium patens HOM05D005328 ORTHO05D006049 5.8e-12 76.3 106 41.5
Lalb_Chr15g0088491 Lupinus albus HOM05D005328 ORTHO05D006049 3.7e-11 73.6 94 43.6
ATR0751G111 Amborella trichopoda HOM05D005328 ORTHO05D006049 6.4e-11 72.8 116 42.2
arahy.Tifrunner.gnm1.ann1.QMQM64 Arachis hypogaea HOM05D005328 ORTHO05D006049 2.4e-10 70.9 94 42.6
arahy.Tifrunner.gnm1.ann1.B05UD4 Arachis hypogaea HOM05D005328 ORTHO05D006049 9.2e-10 68.9 94 41.5
QL05p066147 Quercus lobata HOM05D005328 ORTHO05D006049 1.6e-09 68.2 95 45.3
CiPaw.10G085200 Carya illinoinensis HOM05D005328 ORTHO05D006049 7.8e-09 65.9 95 41.1
vmacro03583 Vaccinium macrocarpon HOM05D005328 ORTHO05D006049 7.8e-09 65.9 82 48.8
Carub.0004s2678 Capsella rubella HOM05D005328 ORTHO05D006049 1.3e-08 65.1 118 35.6
Nitab4.5_0002880g0010 Nicotiana tabacum HOM05D005328 ORTHO05D006049 1.3e-08 65.1 98 39.8
Prupe.1G161200 Prunus persica HOM05D005328 ORTHO05D006049 3.9e-08 63.5 95 40.0
Psat1g170800 Pisum sativum HOM05D005328 ORTHO05D006049 1.5e-07 61.6 94 38.3
Haze_07067 Corylus avellana HOM05D005328 ORTHO05D006049 3.3e-07 60.5 104 38.5
Nn1g08402 Nelumbo nucifera HOM05D005328 ORTHO05D006049 4.3e-07 60.1 95 38.9
Sabra06G0000700 Salix brachista HOM05D005328 ORTHO05D006049 5.6e-07 59.7 95 38.9
BcaB02g08878 Brassica carinata HOM05D005328 ORTHO05D006049 7.3e-07 59.3 51 56.9
CBR_g2953 Chara braunii HOM05D005328 ORTHO05D006049 1.2e-06 58.5 118 36.4


User provided reference genes

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