Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO004G0010 Selaginella moellendorffii HOM05D006314 ORTHO05D007970 3.9e-101 371.7 223 100.0
SMO361G0013 Selaginella moellendorffii HOM05D006314 ORTHO05D007970 1.7e-75 286.6 201 92.0
Manes.14G141100 Manihot esculenta HOM05D006314 ORTHO05D007970 6.0e-33 145.2 231 44.2
Mapoly0013s0096 Marchantia polymorpha HOM05D006314 ORTHO05D007970 7.8e-33 144.8 233 48.9
Potri.004G039400 Populus trichocarpa HOM05D006314 ORTHO05D007970 1.0e-32 144.4 247 42.9
Migut.M01276 Erythranthe guttata HOM05D006314 ORTHO05D007970 2.3e-32 143.3 227 48.0
ECA236G4636 Erigeron canadensis HOM05D006314 ORTHO05D007970 3.9e-32 142.5 222 41.4
AL6G48810 Arabidopsis lyrata HOM05D006314 ORTHO05D007970 5.1e-32 142.1 232 37.5
EL10Ac8g19905 Beta vulgaris HOM05D006314 ORTHO05D007970 8.7e-32 141.4 237 39.2
Prupe.4G027100 Prunus persica HOM05D006314 ORTHO05D007970 1.1e-31 141.0 235 42.1
SEGI_37493 Sequoiadendron giganteum HOM05D006314 ORTHO05D007970 1.9e-31 140.2 228 37.3
SGA_v2.0_scaffold7G03887 Striga asiatica HOM05D006314 ORTHO05D007970 9.6e-31 137.9 222 45.0
Aqoxy5G01372 Aquilegia oxysepala HOM05D006314 ORTHO05D007970 1.3e-30 137.5 231 42.4
Cfa021643 Carpinus fangiana HOM05D006314 ORTHO05D007970 2.1e-30 136.7 233 42.9
BcaB01g01893 Brassica carinata HOM05D006314 ORTHO05D007970 2.8e-30 136.3 129 52.7
Gohir.A06G145000 Gossypium hirsutum HOM05D006314 ORTHO05D007970 2.8e-30 136.3 231 44.6
CiPaw.09G085200 Carya illinoinensis HOM05D006314 ORTHO05D007970 3.6e-30 136.0 242 38.0
Lsat_1_v5_gn_7_17861 Lactuca sativa HOM05D006314 ORTHO05D007970 4.8e-30 135.6 222 45.5
GSVIVG01012621001 Vitis vinifera HOM05D006314 ORTHO05D007970 4.8e-30 135.6 233 41.2
SalBow8G4748 Salvia bowleyana HOM05D006314 ORTHO05D007970 6.2e-30 135.2 227 41.9
Ah.14g088200 Amaranthus hybridus HOM05D006314 ORTHO05D007970 8.1e-30 134.8 232 35.8
QL05p075316 Quercus lobata HOM05D006314 ORTHO05D007970 8.1e-30 134.8 222 42.8
CiPaw.09G086300 Carya illinoinensis HOM05D006314 ORTHO05D007970 1.4e-29 134.0 224 39.7
Gorai.010G176200 Gossypium raimondii HOM05D006314 ORTHO05D007970 1.4e-29 134.0 231 42.0
Aa31LG9G9230 Aethionema arabicum HOM05D006314 ORTHO05D007970 1.8e-29 133.7 128 50.0
Nn1g03656 Nelumbo nucifera HOM05D006314 ORTHO05D007970 2.4e-29 133.3 237 39.7
AT4G05210 Arabidopsis thaliana HOM05D006314 ORTHO05D007970 3.1e-29 132.9 129 51.2
BcaC04g21385 Brassica carinata HOM05D006314 ORTHO05D007970 3.1e-29 132.9 129 50.4
A09p25520 Brassica napus HOM05D006314 ORTHO05D007970 3.1e-29 132.9 129 50.4
C09p32430 Brassica napus HOM05D006314 ORTHO05D007970 3.1e-29 132.9 129 50.4
BolC9t56088H Brassica oleracea HOM05D006314 ORTHO05D007970 3.1e-29 132.9 129 50.4
ATR0618G448 Amborella trichopoda HOM05D006314 ORTHO05D007970 5.3e-29 132.1 227 43.2
AagrBONN_evm.TU.Sc2ySwM_228.2540 Anthoceros agrestis HOM05D006314 ORTHO05D007970 5.3e-29 132.1 241 50.6
HanXRQChr05g0130041 Helianthus annuus HOM05D006314 ORTHO05D007970 6.9e-29 131.7 224 42.9
CsaV3_6G049280 Cucumis sativus L. HOM05D006314 ORTHO05D007970 1.2e-28 131.0 221 45.2
BraA09t38127Z Brassica rapa HOM05D006314 ORTHO05D007970 1.5e-28 130.6 129 49.6
COL.COLO4_31719 Corchorus olitorius HOM05D006314 ORTHO05D007970 2.0e-28 130.2 226 43.8
Haze_06726 Corylus avellana HOM05D006314 ORTHO05D007970 2.0e-28 130.2 270 38.5
PGR031G0385 Punica granatum HOM05D006314 ORTHO05D007970 2.0e-28 130.2 236 41.5
Ciclev10018286m.g Citrus clementina HOM05D006314 ORTHO05D007970 5.8e-28 128.6 231 43.7
Thhalv10025838m.g Eutrema salsugineum HOM05D006314 ORTHO05D007970 5.8e-28 128.6 122 67.2
Hma1.2p1_0729F.1_g209630 Hydrangea macrophylla HOM05D006314 ORTHO05D007970 5.8e-28 128.6 128 48.4
AL7G32880 Arabidopsis lyrata HOM05D006314 ORTHO05D007970 1.3e-27 127.5 123 53.7
CANSAT56G1066 Cannabis sativa HOM05D006314 ORTHO05D007970 1.3e-27 127.5 232 44.4
Sabra04G0024200 Salix brachista HOM05D006314 ORTHO05D007970 1.3e-27 127.5 273 31.9
HPP92_009390 Vanilla planifolia HOM05D006314 ORTHO05D007970 3.8e-27 125.9 126 65.1
HPP92_009395 Vanilla planifolia HOM05D006314 ORTHO05D007970 3.8e-27 125.9 126 65.1
AT4G21220 Arabidopsis thaliana HOM05D006314 ORTHO05D007970 6.4e-27 125.2 122 50.0
Carub.0007s2019 Capsella rubella HOM05D006314 ORTHO05D007970 6.4e-27 125.2 122 54.1
Hund21374 Selenicereus undatus HOM05D006314 ORTHO05D007970 6.4e-27 125.2 222 33.8
CARHR227820 Cardamine hirsuta HOM05D006314 ORTHO05D007970 8.4e-27 124.8 122 67.2
Haze_06729 Corylus avellana HOM05D006314 ORTHO05D007970 1.1e-26 124.4 127 64.6
MD05G1340500 Malus domestica HOM05D006314 ORTHO05D007970 1.1e-26 124.4 223 43.9
CAN.G404.73 Capsicum annuum HOM05D006314 ORTHO05D007970 1.9e-26 123.6 233 40.3
MELO3C007369.2 Cucumis melo HOM05D006314 ORTHO05D007970 1.9e-26 123.6 214 46.3
Pp3c4_25780 Physcomitrium patens HOM05D006314 ORTHO05D007970 1.9e-26 123.6 124 75.8
Actinidia26953 Actinidia chinensis HOM05D006314 ORTHO05D007970 4.2e-26 122.5 123 61.8
CBR_g20160 Chara braunii HOM05D006314 ORTHO05D007970 5.4e-26 122.1 124 76.6
Duzib235G0913 Durio zibethinus HOM05D006314 ORTHO05D007970 7.1e-26 121.7 245 38.8
Eucgr.D00832 Eucalyptus grandis HOM05D006314 ORTHO05D007970 3.5e-25 119.4 123 58.5
ClCG01G022220 Citrullus lanatus HOM05D006314 ORTHO05D007970 7.9e-25 118.2 214 46.7
CSS0045332 Camellia sinensis var. sinensis HOM05D006314 ORTHO05D007970 1.0e-24 117.9 123 71.5
Actinidia05538 Actinidia chinensis HOM05D006314 ORTHO05D007970 2.3e-24 116.7 123 65.9
Gohir.D06G151200 Gossypium hirsutum HOM05D006314 ORTHO05D007970 3.0e-24 116.3 161 41.6
MBI02_g34312_MAGBIO Magnolia biondii HOM05D006314 ORTHO05D007970 3.0e-24 116.3 237 40.9
Nn5g27983 Nelumbo nucifera HOM05D006314 ORTHO05D007970 6.7e-24 115.2 140 43.6
AUR62012635 Chenopodium quinoa HOM05D006314 ORTHO05D007970 1.1e-23 114.4 236 38.6
Medtr7g047630 Medicago truncatula HOM05D006314 ORTHO05D007970 1.3e-22 110.9 225 40.4
Medtr7g451810 Medicago truncatula HOM05D006314 ORTHO05D007970 1.3e-22 110.9 225 40.4
Solyc03g031560.4 Solanum lycopersicum HOM05D006314 ORTHO05D007970 2.1e-22 110.2 138 40.6
Thecc.06G213300 Theobroma cacao HOM05D006314 ORTHO05D007970 2.8e-22 109.8 160 38.8
Sopen03g005440 Solanum pennellii HOM05D006314 ORTHO05D007970 3.6e-22 109.4 124 64.5
FAN25G2977 Fragaria x ananassa HOM05D006314 ORTHO05D007970 4.8e-22 109.0 279 29.0
THA.LOC104812945 Tarenaya hassleriana HOM05D006314 ORTHO05D007970 8.1e-22 108.2 232 41.8
Cpa.g.sc81.24 Carica papaya HOM05D006314 ORTHO05D007970 1.1e-21 107.8 235 30.2
Glyma.01G240700 Glycine max HOM05D006314 ORTHO05D007970 1.4e-21 107.5 226 38.5
RcHm_v2.0_Chr5g0004131 Rosa chinensis HOM05D006314 ORTHO05D007970 1.4e-21 107.5 231 37.7
VMungo1215G0781 Vigna mungo HOM05D006314 ORTHO05D007970 2.4e-21 106.7 248 35.5
CDE05G2602 Ceratophyllum demersum HOM05D006314 ORTHO05D007970 5.3e-21 105.5 240 31.2
Phvul.002G049200 Phaseolus vulgaris HOM05D006314 ORTHO05D007970 9.0e-21 104.8 224 37.9
Lj1A1224T36 Lonicera japonica HOM05D006314 ORTHO05D007970 1.5e-20 104.0 213 42.7
FvH4_3g02730 Fragaria vesca HOM05D006314 ORTHO05D007970 2.0e-20 103.6 226 38.9
Lj1g0010466 Lotus japonicus HOM05D006314 ORTHO05D007970 7.6e-20 101.7 227 38.3
PSO675G3227 Papaver somniferum HOM05D006314 ORTHO05D007970 9.9e-20 101.3 250 41.2
unitig_748.g7139 Utricularia gibba HOM05D006350 ORTHO05D007850 9.9e-20 101.3 108 48.1
DCAR_004187 Daucus carota HOM05D006314 ORTHO05D007970 1.7e-19 100.5 232 36.6
Oeu002711.1 Olea europaea HOM05D006314 ORTHO05D007970 1.7e-19 100.5 123 62.6
arahy.Tifrunner.gnm1.ann1.937J55 Arachis hypogaea HOM05D006314 ORTHO05D007970 6.4e-19 98.6 214 38.8
arahy.Tifrunner.gnm1.ann1.PEH28W Arachis hypogaea HOM05D006314 ORTHO05D007970 6.4e-19 98.6 214 38.8
FAN21G1433 Fragaria x ananassa HOM05D006314 ORTHO05D007970 6.4e-19 98.6 247 29.6
PSO541G6217 Papaver somniferum HOM05D006314 ORTHO05D007970 6.4e-19 98.6 256 38.3
Cc00_g17320 Coffea canephora HOM05D006314 ORTHO05D007970 8.4e-19 98.2 123 61.8
TAR627G0699 Trochodendron aralioides HOM05D006314 ORTHO05D007970 1.1e-18 97.8 107 61.7
TPR.G10185 Trifolium pratense HOM05D006314 ORTHO05D007970 1.4e-18 97.4 224 39.3
Lalb_Chr16g0376341 Lupinus albus HOM05D006314 ORTHO05D007970 4.2e-18 95.9 123 62.6
Rhsim13G0158200 Rhododendron simsii HOM05D006314 ORTHO05D007970 7.1e-18 95.1 161 55.3
Ca_07429_v3 Cicer arietinum L. HOM05D006314 ORTHO05D007970 2.1e-17 93.6 215 37.7
Sp6g03780 Schrenkiella parvula HOM05D006314 ORTHO05D007970 4.6e-17 92.4 129 55.8
PGSC0003DMG400005049 Solanum tuberosum HOM05D006314 ORTHO05D007970 2.3e-16 90.1 56 71.4
PRCOL_00005452 Prasinoderma coloniale HOM05D006314 ORTHO05D007970 3.0e-16 89.7 125 55.2
Zm00001eb306890 Zea mays HOM05D006314 ORTHO05D007970 5.1e-16 89.0 261 36.8
vmacro03713 Vaccinium macrocarpon HOM05D006314 ORTHO05D007970 1.5e-15 87.4 160 33.8
Nitab4.5_0000900g0100 Nicotiana tabacum HOM05D006314 ORTHO05D007970 2.5e-15 86.7 186 42.5
TWI38G0264 Tripterygium wilfordii HOM05D006314 ORTHO05D007970 2.5e-15 86.7 192 29.2
Dinv17838 Davidia involucrata HOM05D006314 ORTHO05D007970 1.6e-14 84.0 148 35.8
Psat3g152680 Pisum sativum HOM05D006314 ORTHO05D007970 1.1e-13 81.3 147 34.0
Glyma.11G002900 Glycine max HOM05D006314 ORTHO05D007970 1.4e-13 80.9 120 43.3
Nitab4.5_0004428g0040 Nicotiana tabacum HOM05D006314 ORTHO05D007970 5.3e-13 79.0 205 27.3
Peaxi162Scf00781g00047 Petunia axillaris HOM05D006314 ORTHO05D007970 1.5e-12 77.4 111 65.8
AUR62022021 Chenopodium quinoa HOM05D006314 ORTHO05D007970 4.9e-11 72.4 190 26.8
FAN25G3594 Fragaria x ananassa HOM05D006314 ORTHO05D007970 6.0e-09 65.5 36 77.8
Sc05g0008810 Simmondsia chinensis HOM05D006314 ORTHO05D007970 5.1e-08 62.4 213 32.9


User provided reference genes

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