Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI54853 Sapria himalayana HOM05D003719 ORTHO05D004116 5.5e-184 647.5 330 100.0
SHI15580 Sapria himalayana HOM05D003719 ORTHO05D004116 4.3e-128 461.8 250 96.8
SHI50054 Sapria himalayana HOM05D003719 ORTHO05D004116 2.4e-118 429.5 255 90.2
Potri.013G070400 Populus trichocarpa HOM05D003719 ORTHO05D004116 1.5e-59 234.2 320 46.9
Sabra13G0061200 Salix brachista HOM05D003719 ORTHO05D004116 8.8e-57 224.9 317 45.4
Potri.019G044400 Populus trichocarpa HOM05D003719 ORTHO05D004116 7.0e-54 215.3 317 43.5
Duzib128G0107 Durio zibethinus HOM05D003719 ORTHO05D004116 1.6e-53 214.2 317 44.5
Cpa.g.sc73.30 Carica papaya HOM05D003719 ORTHO05D004116 2.7e-53 213.4 316 45.9
Sabra19G0054700 Salix brachista HOM05D003719 ORTHO05D004116 7.7e-53 211.8 317 42.9
Manes.09G133700 Manihot esculenta HOM05D003719 ORTHO05D004116 3.2e-51 206.5 327 43.1
Duzib177G0203 Durio zibethinus HOM05D003719 ORTHO05D004116 1.2e-50 204.5 320 43.8
Manes.08G156200 Manihot esculenta HOM05D003719 ORTHO05D004116 2.3e-49 200.3 325 43.7
Thecc.05G235300 Theobroma cacao HOM05D003719 ORTHO05D004116 1.2e-48 198.0 319 42.6
RcHm_v2.0_Chr1g0340791 Rosa chinensis HOM05D003719 ORTHO05D004116 4.5e-45 186.0 321 40.8
CANSAT25G2268 Cannabis sativa HOM05D003719 ORTHO05D004116 5.9e-45 185.7 318 41.5
Gorai.007G347200 Gossypium raimondii HOM05D003719 ORTHO05D004116 1.3e-44 184.5 319 42.0
Atru.chr2.1627 Acer truncatum HOM05D003719 ORTHO05D004116 1.7e-44 184.1 316 41.1
Gohir.D11G317400 Gossypium hirsutum HOM05D003719 ORTHO05D004116 1.7e-44 184.1 318 41.5
Gohir.A11G301800 Gossypium hirsutum HOM05D003719 ORTHO05D004116 2.9e-44 183.3 317 39.4
Ciclev10031549m.g Citrus clementina HOM05D003719 ORTHO05D004116 1.1e-43 181.4 315 41.6
MD07G1081800 Malus domestica HOM05D003719 ORTHO05D004116 1.1e-43 181.4 320 39.7
MD02G1231000 Malus domestica HOM05D003719 ORTHO05D004116 7.2e-43 178.7 320 40.0
Haze_15777 Corylus avellana HOM05D003719 ORTHO05D004116 2.1e-42 177.2 324 38.3
CiPaw.02G047600 Carya illinoinensis HOM05D003719 ORTHO05D004116 1.8e-41 174.1 317 40.7
FvH4_7g08280 Fragaria vesca HOM05D003719 ORTHO05D004116 3.0e-41 173.3 320 39.4
Eucgr.E01743 Eucalyptus grandis HOM05D003719 ORTHO05D004116 6.8e-41 172.2 323 39.0
TWI32G1338 Tripterygium wilfordii HOM05D003719 ORTHO05D004116 8.9e-41 171.8 316 39.6
CsaV3_6G006350 Cucumis sativus L. HOM05D003719 ORTHO05D004116 1.2e-40 171.4 322 38.8
QL04p053441 Quercus lobata HOM05D003719 ORTHO05D004116 2.6e-40 170.2 324 39.5
PGR042G1172 Punica granatum HOM05D003719 ORTHO05D004116 9.8e-40 168.3 311 41.2
ClCG06G000580 Citrullus lanatus HOM05D003719 ORTHO05D004116 1.3e-39 167.9 321 39.3
Dinv43515 Davidia involucrata HOM05D003719 ORTHO05D004116 1.7e-39 167.5 321 37.4
CARHR195490 Cardamine hirsuta HOM05D003719 ORTHO05D004116 6.3e-39 165.6 320 38.4
Sp6g26530 Schrenkiella parvula HOM05D003719 ORTHO05D004116 8.3e-39 165.2 315 38.1
MELO3C022484.2 Cucumis melo HOM05D003719 ORTHO05D004116 1.1e-38 164.9 321 39.3
Actinidia31730 Actinidia chinensis HOM05D003719 ORTHO05D004116 1.4e-38 164.5 319 35.7
THA.LOC104820814 Tarenaya hassleriana HOM05D003719 ORTHO05D004116 3.2e-38 163.3 325 37.5
Actinidia05832 Actinidia chinensis HOM05D003719 ORTHO05D004116 5.4e-38 162.5 330 37.3
Thhalv10013571m.g Eutrema salsugineum HOM05D003719 ORTHO05D004116 5.4e-38 162.5 315 37.8
Sed0010466 Sechium edule HOM05D003719 ORTHO05D004116 9.2e-38 161.8 322 38.2
TWI60G0027 Tripterygium wilfordii HOM05D003719 ORTHO05D004116 9.2e-38 161.8 322 38.5
AL6G28780 Arabidopsis lyrata HOM05D003719 ORTHO05D004116 1.2e-37 161.4 324 36.7
GSVIVG01019328001 Vitis vinifera HOM05D003719 ORTHO05D004116 1.6e-37 161.0 317 38.2
AT5G17690 Arabidopsis thaliana HOM05D003719 ORTHO05D004116 2.0e-37 160.6 314 37.3
MBI04_g06283_MAGBIO Magnolia biondii HOM05D003719 ORTHO05D004116 4.6e-37 159.5 317 35.0
THA.LOC104827246 Tarenaya hassleriana HOM05D003719 ORTHO05D004116 4.6e-37 159.5 328 37.5
Carub.0006s1593 Capsella rubella HOM05D003719 ORTHO05D004116 2.3e-36 157.1 315 37.1
FAN06G0622 Fragaria x ananassa HOM05D003719 ORTHO05D004116 1.5e-35 154.5 338 36.7
Dinv43958 Davidia involucrata HOM05D003719 ORTHO05D004116 5.6e-35 152.5 325 34.8
Aa31LG11G11940 Aethionema arabicum HOM05D003719 ORTHO05D004116 9.5e-35 151.8 326 36.8
THA.LOC104802889 Tarenaya hassleriana HOM05D003719 ORTHO05D004116 1.6e-34 151.0 315 39.0
FAN10G3972 Fragaria x ananassa HOM05D003719 ORTHO05D004116 2.1e-34 150.6 332 36.4
Sed0012975 Sechium edule HOM05D003719 ORTHO05D004116 2.1e-34 150.6 340 34.4
Hma1.2p1_0128F.1_g060060 Hydrangea macrophylla HOM05D003719 ORTHO05D004116 2.8e-34 150.2 327 37.0
TAR629G0070 Trochodendron aralioides HOM05D003719 ORTHO05D004116 4.7e-34 149.4 321 38.0
arahy.Tifrunner.gnm1.ann1.N569AS Arachis hypogaea HOM05D003719 ORTHO05D004116 8.0e-34 148.7 323 38.7
Nn1g09363 Nelumbo nucifera HOM05D003719 ORTHO05D004116 1.8e-33 147.5 339 35.4
BcaC03g13534 Brassica carinata HOM05D003719 ORTHO05D004116 2.3e-33 147.1 317 35.6
C02p09250 Brassica napus HOM05D003719 ORTHO05D004116 4.0e-33 146.4 317 35.6
Nitab4.5_0025236g0010 Nicotiana tabacum HOM05D003719 ORTHO05D004116 4.0e-33 146.4 313 34.5
PSO017G6528 Papaver somniferum HOM05D003719 ORTHO05D004116 4.0e-33 146.4 323 35.0
BolC2t06833H Brassica oleracea HOM05D003719 ORTHO05D004116 5.2e-33 146.0 316 35.4
Nitab4.5_0000792g0110 Nicotiana tabacum HOM05D003719 ORTHO05D004116 5.2e-33 146.0 313 33.9
A02p04380 Brassica napus HOM05D003719 ORTHO05D004116 3.4e-32 143.3 315 36.5
BraA02t05402Z Brassica rapa HOM05D003719 ORTHO05D004116 3.4e-32 143.3 315 36.5
Nitab4.5_0000050g0180 Nicotiana tabacum HOM05D003719 ORTHO05D004116 4.4e-32 142.9 313 34.8
PSO170G0628 Papaver somniferum HOM05D003719 ORTHO05D004116 5.8e-32 142.5 333 33.3
arahy.Tifrunner.gnm1.ann1.U92JU2 Arachis hypogaea HOM05D003719 ORTHO05D004116 7.5e-32 142.1 323 37.8
MSTRG.4990 Avicennia marina HOM05D003719 ORTHO05D004116 7.5e-32 142.1 322 36.3
Migut.N01648 Erythranthe guttata HOM05D003719 ORTHO05D004116 4.9e-31 139.4 329 36.5
Glyma.16G079900 Glycine max HOM05D003719 ORTHO05D004116 4.9e-31 139.4 320 33.8
Oeu020240.1 Olea europaea HOM05D003719 ORTHO05D004116 5.4e-30 136.0 337 36.2
BcaB08g36751 Brassica carinata HOM05D003719 ORTHO05D004116 9.2e-30 135.2 333 35.4
BraA09t37591Z Brassica rapa HOM05D003719 ORTHO05D004116 9.2e-30 135.2 319 36.1
A10p21730 Brassica napus HOM05D003719 ORTHO05D004116 1.2e-29 134.8 325 35.7
BraA10t44234Z Brassica rapa HOM05D003719 ORTHO05D004116 1.2e-29 134.8 325 35.7
Sopen01g033060 Solanum pennellii HOM05D003719 ORTHO05D004116 1.2e-29 134.8 320 32.8
ClCG05G002450 Citrullus lanatus HOM05D003719 ORTHO05D004116 1.6e-29 134.4 309 35.0
Solyc01g081500.4 Solanum lycopersicum HOM05D003719 ORTHO05D004116 2.0e-29 134.0 320 32.8
HanXRQChr04g0117621 Helianthus annuus HOM05D003719 ORTHO05D004116 1.3e-28 131.3 320 33.4
Lj3g0017682 Lotus japonicus HOM05D003719 ORTHO05D004116 1.3e-28 131.3 321 34.6
Hund17170 Selenicereus undatus HOM05D003719 ORTHO05D000105 1.3e-28 131.3 329 35.3
Oeu034882.1 Olea europaea HOM05D003719 ORTHO05D004116 3.9e-28 129.8 265 38.1
Sc02g0003460 Simmondsia chinensis HOM05D003719 ORTHO05D004116 3.9e-28 129.8 315 32.7
BcaC04g18768 Brassica carinata HOM05D003719 ORTHO05D004116 1.1e-27 128.3 320 34.7
C09p59480 Brassica napus HOM05D003719 ORTHO05D004116 1.1e-27 128.3 320 34.7
BolC9t58786H Brassica oleracea HOM05D003719 ORTHO05D004116 1.1e-27 128.3 320 34.7
Cc02_g26500 Coffea canephora HOM05D003719 ORTHO05D004116 1.1e-27 128.3 326 32.5
EL10Ac1g00661 Beta vulgaris HOM05D003719 ORTHO05D004116 3.3e-27 126.7 312 33.7
Peaxi162Scf00245g00417 Petunia axillaris HOM05D003719 ORTHO05D004116 4.3e-27 126.3 352 32.1
Aqoxy7G02508 Aquilegia oxysepala HOM05D003719 ORTHO05D004116 5.6e-27 125.9 327 31.5
Glyma.03G094200 Glycine max HOM05D003719 ORTHO05D004116 9.5e-27 125.2 325 32.9
Rhsim07G0047900 Rhododendron simsii HOM05D003719 ORTHO05D004116 9.5e-27 125.2 352 31.2
PGSC0003DMG400031112 Solanum tuberosum HOM05D003719 ORTHO05D004116 1.6e-26 124.4 330 30.0
VMungo0331G0617 Vigna mungo HOM05D003719 ORTHO05D004116 1.6e-26 124.4 326 35.6
Oeu045633.2 Olea europaea HOM05D003719 ORTHO05D004116 2.1e-26 124.0 314 33.1
VMungo1309G0350 Vigna mungo HOM05D003719 ORTHO05D004116 4.7e-26 122.9 308 32.8
Phvul.009G117500 Phaseolus vulgaris HOM05D003719 ORTHO05D004116 8.1e-26 122.1 315 34.3
Prupe.2G107000 Prunus persica HOM05D003719 ORTHO05D004116 8.1e-26 122.1 296 35.5
Ah.05g177100 Amaranthus hybridus HOM05D003719 ORTHO05D004116 1.8e-25 120.9 306 31.4
HPP92_020485 Vanilla planifolia HOM05D003719 ORTHO05D004116 2.3e-25 120.6 310 31.3
ATR0568G049 Amborella trichopoda HOM05D003719 ORTHO05D004116 3.1e-25 120.2 331 31.7
Phvul.010G034600 Phaseolus vulgaris HOM05D003719 ORTHO05D004116 4.0e-25 119.8 329 35.9
CDE11G0837 Ceratophyllum demersum HOM05D003719 ORTHO05D004116 6.8e-25 119.0 315 31.1
BraA09t38097Z Brassica rapa HOM05D003719 ORTHO05D004116 9.8e-24 115.2 123 54.5
Lj9A617T60 Lonicera japonica HOM05D003719 ORTHO05D004116 9.8e-24 115.2 309 33.3
unitig_0.g1580 Utricularia gibba HOM05D003719 ORTHO05D004116 9.8e-24 115.2 306 33.0
Nitab4.5_0003123g0030 Nicotiana tabacum HOM05D003719 ORTHO05D004116 2.9e-23 113.6 341 32.8
Sed0017190 Sechium edule HOM05D003719 ORTHO05D004116 2.9e-23 113.6 312 33.7
Oeu032776.1 Olea europaea HOM05D003719 ORTHO05D004116 4.9e-23 112.8 316 30.4
Oeu024948.1 Olea europaea HOM05D003719 ORTHO05D004116 1.4e-22 111.3 314 30.9
Solyc10g024470.3 Solanum lycopersicum HOM05D003719 ORTHO05D004116 1.9e-22 110.9 84 63.1
Sopen10g009690 Solanum pennellii HOM05D003719 ORTHO05D004116 1.9e-22 110.9 84 63.1
TPR.G38555 Trifolium pratense HOM05D001257 ORTHO05D005285 7.1e-22 109.0 323 31.3
ECA248G2234 Erigeron canadensis HOM05D003719 ORTHO05D004116 9.2e-22 108.6 326 27.0
CsaV3_3G009890 Cucumis sativus L. HOM05D002544 ORTHO05D007277 1.2e-21 108.2 316 31.6
ECA236G3956 Erigeron canadensis HOM05D001257 ORTHO05D005285 1.2e-21 108.2 327 31.2
Os10g0324900 Oryza sativa ssp. japonica HOM05D003719 ORTHO05D004116 1.2e-21 108.2 310 31.6
TPR.G9787 Trifolium pratense HOM05D003719 ORTHO05D004116 2.1e-21 107.5 344 28.8
Migut.O00699 Erythranthe guttata HOM05D003719 ORTHO05D004116 4.6e-21 106.3 83 61.4
Glyma.04G002100 Glycine max HOM05D003719 ORTHO05D004116 4.6e-21 106.3 85 61.2
Glyma.06G001700 Glycine max HOM05D003719 ORTHO05D004116 1.3e-20 104.8 85 58.8
COL.COLO4_32214 Corchorus olitorius HOM05D003719 ORTHO05D004116 1.7e-20 104.4 274 37.2
FAN01G0294 Fragaria x ananassa HOM05D003719 ORTHO05D004116 2.3e-20 104.0 246 36.2
DCAR_015727 Daucus carota HOM05D003719 ORTHO05D004116 3.9e-20 103.2 233 34.3
PGSC0003DMG400031514 Solanum tuberosum HOM05D003719 ORTHO05D004116 3.9e-20 103.2 84 58.3
DCAR_025000 Daucus carota HOM05D003719 ORTHO05D004116 5.1e-20 102.8 185 38.9
FAN03G1006 Fragaria x ananassa HOM05D003719 ORTHO05D004116 6.6e-20 102.4 320 32.2
Peaxi162Scf00907g00023 Petunia axillaris HOM05D003719 ORTHO05D004116 1.9e-19 100.9 321 30.2
SGA_v2.0_scaffold95G28748 Striga asiatica HOM05D003719 ORTHO05D004116 3.3e-19 100.1 319 32.0
vmacro13601 Vaccinium macrocarpon HOM05D003719 ORTHO05D004116 7.3e-19 99.0 331 30.2
Nn7g37398 Nelumbo nucifera HOM05D003719 ORTHO05D004116 1.2e-18 98.2 57 73.7
DCAR_029570 Daucus carota HOM05D003719 ORTHO05D004116 2.1e-18 97.4 308 30.8
HanXRQChr11g0343451 Helianthus annuus HOM05D003719 ORTHO05D004116 2.1e-18 97.4 121 46.3
Psat5g001120 Pisum sativum HOM05D003719 ORTHO05D004116 3.6e-18 96.7 61 67.2
Lalb_Chr23g0264911 Lupinus albus HOM05D003719 ORTHO05D004116 1.4e-17 94.7 307 28.7
Glyma.03G111600 Glycine max HOM05D003719 ORTHO05D004116 2.3e-17 94.0 79 58.2
PSO732G0548 Papaver somniferum HOM05D003719 ORTHO05D004116 4.0e-17 93.2 310 29.0
PSO732G0471 Papaver somniferum HOM05D003719 ORTHO05D004116 5.2e-17 92.8 310 29.0
Lalb_Chr07g0194591 Lupinus albus HOM05D003719 ORTHO05D004116 6.8e-17 92.4 308 29.9
PSO732G0498 Papaver somniferum HOM05D003719 ORTHO05D004116 6.8e-17 92.4 310 29.0
Lsat_1_v5_gn_7_34101 Lactuca sativa HOM05D003719 ORTHO05D004116 2.0e-16 90.9 332 27.1
Lalb_Chr13g0290971 Lupinus albus HOM05D003719 ORTHO05D004116 2.0e-16 90.9 242 32.6
Lsat_1_v5_gn_1_89600 Lactuca sativa HOM05D003719 ORTHO05D004116 2.6e-16 90.5 311 28.6
PSO017G0756 Papaver somniferum HOM05D003719 ORTHO05D004116 2.6e-16 90.5 58 65.5
AUR62038028 Chenopodium quinoa HOM05D003719 ORTHO05D004116 5.8e-16 89.4 284 32.0
Psat4g207560 Pisum sativum HOM05D003719 ORTHO05D004116 5.8e-16 89.4 80 50.0
BcaB01g05152 Brassica carinata HOM05D003719 ORTHO05D004116 1.3e-15 88.2 73 56.2
BolC3t13474H Brassica oleracea HOM05D003719 ORTHO05D004116 1.3e-15 88.2 73 56.2
PSO170G3936 Papaver somniferum HOM05D033783 ORTHO05D004116 2.2e-15 87.4 79 54.4
AUR62014507 Chenopodium quinoa HOM05D003719 ORTHO05D004116 3.7e-15 86.7 284 31.7
Mapoly0009s0028 Marchantia polymorpha HOM05D003719 ORTHO05D004116 3.7e-15 86.7 95 43.2
HanXRQChr04g0117671 Helianthus annuus HOM05D003719 ORTHO05D004116 4.9e-15 86.3 77 45.5
PSO017G2979 Papaver somniferum HOM05D033783 ORTHO05D004116 4.9e-15 86.3 79 53.2
PSO017G2223 Papaver somniferum HOM05D003719 ORTHO05D004116 6.4e-15 85.9 295 29.8
A03p08460 Brassica napus HOM05D003719 ORTHO05D004116 8.4e-15 85.5 69 58.0
BraA03t10169Z Brassica rapa HOM05D003719 ORTHO05D004116 8.4e-15 85.5 69 58.0
PSO675G5773 Papaver somniferum HOM05D003719 ORTHO05D004116 1.1e-14 85.1 68 60.3
Ca_23168_v3 Cicer arietinum L. HOM05D003719 ORTHO05D004116 1.9e-14 84.3 331 28.4
Lalb_Chr12g0210141 Lupinus albus HOM05D003719 ORTHO05D004116 2.4e-14 84.0 350 26.6
BcaB01g04909 Brassica carinata HOM05D003719 ORTHO05D004116 4.1e-14 83.2 106 40.6
Lalb_Chr10g0091841 Lupinus albus HOM05D003719 ORTHO05D004116 1.6e-13 81.3 68 48.5
PSO349G0045 Papaver somniferum HOM05D003719 ORTHO05D004116 2.7e-13 80.5 252 31.0
Lalb_Chr13g0290921 Lupinus albus HOM05D003719 ORTHO05D004116 3.5e-13 80.1 130 42.3
Hund26916 Selenicereus undatus HOM05D003719 ORTHO05D004116 3.9e-12 76.6 319 28.2
Pp3c9_6410 Physcomitrium patens HOM05D003719 ORTHO05D004116 8.6e-12 75.5 89 42.7
SEGI_39270 Sequoiadendron giganteum HOM05D003719 ORTHO05D004116 1.9e-11 74.3 65 47.7
SEGI_28532 Sequoiadendron giganteum HOM05D003719 ORTHO05D004116 2.5e-11 73.9 331 23.6
Ah.05g177090 Amaranthus hybridus HOM05D000308 ORTHO05D005285 1.6e-10 71.2 287 27.9
Hma1.2p1_0462F.1_g158020 Hydrangea macrophylla HOM05D003719 ORTHO05D004116 4.7e-10 69.7 294 27.6
Ca_15283_v3 Cicer arietinum L. HOM05D003719 ORTHO05D004116 8.1e-10 68.9 280 26.8
Ca_15419_v3 Cicer arietinum L. HOM05D003719 ORTHO05D004116 8.1e-10 68.9 280 26.8
Mapoly0024s0010 Marchantia polymorpha HOM05D003719 ORTHO05D004116 4.0e-09 66.6 82 40.2
arahy.Tifrunner.gnm1.ann1.RGD672 Arachis hypogaea HOM05D022377 ORTHO05D004116 5.2e-09 66.2 79 35.4
arahy.Tifrunner.gnm1.ann1.ACR8J8 Arachis hypogaea HOM05D022377 ORTHO05D004116 6.8e-09 65.9 79 36.7
C03p09860 Brassica napus HOM05D003719 ORTHO05D004116 6.8e-09 65.9 73 49.3
Mapoly0010s0167 Marchantia polymorpha HOM05D003719 ORTHO05D004116 8.9e-09 65.5 82 39.0
arahy.Tifrunner.gnm1.ann1.FLAY3S Arachis hypogaea HOM05D003719 ORTHO05D004116 1.2e-08 65.1 57 43.9
PSO732G0588 Papaver somniferum HOM05D003719 ORTHO05D004116 2.0e-08 64.3 57 54.4
SGA_v2.0_scaffold4G02229 Striga asiatica HOM05D003719 ORTHO05D004116 7.6e-08 62.4 315 27.9
arahy.Tifrunner.gnm1.ann1.SX0HJ3 Arachis hypogaea HOM05D022377 ORTHO05D004116 1.7e-07 61.2 78 34.6
Aqoxy7G02797 Aquilegia oxysepala HOM05D003719 ORTHO05D004116 4.9e-07 59.7 87 35.6


User provided reference genes

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