Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI45533 Sapria himalayana HOM05D003395 ORTHO05D004087 2.4e-78 295.4 148 100.0
SHI44367 Sapria himalayana HOM05D003395 ORTHO05D004087 7.9e-74 280.4 148 95.9
SHI34459 Sapria himalayana HOM05D003395 ORTHO05D004087 2.9e-44 182.2 177 57.1
SHI37781 Sapria himalayana HOM05D003395 ORTHO05D004087 5.0e-44 181.4 162 59.9
SHI10456 Sapria himalayana HOM05D003395 ORTHO05D004087 1.5e-43 179.9 271 42.8
SHI40120 Sapria himalayana HOM05D003395 ORTHO05D004087 1.7e-39 166.4 103 81.6
SHI34713 Sapria himalayana HOM05D003395 ORTHO05D004087 7.3e-35 151.0 99 75.8
Eucgr.K01721 Eucalyptus grandis HOM05D003395 ORTHO05D004087 5.2e-33 144.8 202 41.1
Manes.11G065000 Manihot esculenta HOM05D003395 ORTHO05D004087 3.4e-32 142.1 253 36.4
CsaV3_3G040740 Cucumis sativus L. HOM05D003395 ORTHO05D004087 1.3e-31 140.2 253 36.0
MELO3C009808.2 Cucumis melo HOM05D003395 ORTHO05D004087 1.1e-30 137.1 253 35.2
Dinv39652 Davidia involucrata HOM05D003395 ORTHO05D004087 1.9e-30 136.3 252 34.9
Haze_19811 Corylus avellana HOM05D003395 ORTHO05D004087 2.4e-30 136.0 253 35.2
CSS0000776 Camellia sinensis var. sinensis HOM05D003395 ORTHO05D004087 4.1e-30 135.2 253 34.4
ClCG10G015680 Citrullus lanatus HOM05D003395 ORTHO05D004087 4.1e-30 135.2 253 34.8
TPR.G37242 Trifolium pratense HOM05D003395 ORTHO05D004087 4.1e-30 135.2 252 34.5
Atru.chr1.1149 Acer truncatum HOM05D003395 ORTHO05D004087 5.4e-30 134.8 251 35.1
Haze_19814 Corylus avellana HOM05D003395 ORTHO05D004087 5.4e-30 134.8 253 35.2
Potri.015G026200 Populus trichocarpa HOM05D003395 ORTHO05D004087 9.2e-30 134.0 253 34.4
SHI32287 Sapria himalayana HOM05D003395 ORTHO05D004087 9.2e-30 134.0 133 57.9
Medtr2g103370 Medicago truncatula HOM05D003395 ORTHO05D004087 1.6e-29 133.3 252 34.1
Lj3g0013293 Lotus japonicus HOM05D003395 ORTHO05D004087 2.7e-29 132.5 252 34.5
Ca_01074_v3 Cicer arietinum L. HOM05D003395 ORTHO05D004087 3.5e-29 132.1 252 33.7
Gorai.007G357300 Gossypium raimondii HOM05D003395 ORTHO05D004087 3.5e-29 132.1 253 33.2
Psat5g301400 Pisum sativum HOM05D003395 ORTHO05D004087 3.5e-29 132.1 252 33.7
PGSC0003DMG400012709 Solanum tuberosum HOM05D003395 ORTHO05D004087 7.8e-29 131.0 241 34.9
CANSAT80G2433 Cannabis sativa HOM05D003395 ORTHO05D004087 1.0e-28 130.6 253 34.0
Duzib128G1779 Durio zibethinus HOM05D003395 ORTHO05D004087 1.0e-28 130.6 253 33.6
vmacro09059 Vaccinium macrocarpon HOM05D003395 ORTHO05D004087 1.0e-28 130.6 253 33.6
CiPaw.09G039800 Carya illinoinensis HOM05D003395 ORTHO05D004087 1.3e-28 130.2 253 33.2
Ciclev10004294m.g Citrus clementina HOM05D003395 ORTHO05D004087 1.3e-28 130.2 253 33.6
Haze_09905 Corylus avellana HOM05D003395 ORTHO05D004087 1.3e-28 130.2 252 33.7
Gohir.D11G326700 Gossypium hirsutum HOM05D003395 ORTHO05D004087 1.3e-28 130.2 253 32.8
QL07p003024 Quercus lobata HOM05D003395 ORTHO05D004087 1.7e-28 129.8 253 33.6
Sed0021456 Sechium edule HOM05D003395 ORTHO05D004087 2.3e-28 129.4 253 33.2
VMungo1080G0039 Vigna mungo HOM05D003395 ORTHO05D004087 2.3e-28 129.4 252 33.3
arahy.Tifrunner.gnm1.ann1.13YWQX Arachis hypogaea HOM05D003395 ORTHO05D004087 3.0e-28 129.0 252 31.7
arahy.Tifrunner.gnm1.ann1.C8DH2G Arachis hypogaea HOM05D003395 ORTHO05D004087 3.0e-28 129.0 252 31.7
CAN.G676.13 Capsicum annuum HOM05D003395 ORTHO05D004087 3.0e-28 129.0 107 58.9
Sopen04g008350 Solanum pennellii HOM05D003395 ORTHO05D004087 3.0e-28 129.0 107 58.9
Phvul.005G175500 Phaseolus vulgaris HOM05D003395 ORTHO05D004087 3.9e-28 128.6 252 33.3
SHI27325 Sapria himalayana HOM05D003395 ORTHO05D004087 3.9e-28 128.6 77 79.2
Thecc.05G151200 Theobroma cacao HOM05D003395 ORTHO05D004087 3.9e-28 128.6 252 33.7
Glyma.15G010000 Glycine max HOM05D003395 ORTHO05D004087 5.0e-28 128.3 252 33.7
Rhsim04G0105700 Rhododendron simsii HOM05D003395 ORTHO05D004087 5.0e-28 128.3 107 57.0
Potri.012G034800 Populus trichocarpa HOM05D003395 ORTHO05D004087 6.6e-28 127.9 253 33.6
Glyma.13G363900 Glycine max HOM05D003395 ORTHO05D004087 8.6e-28 127.5 252 33.7
Lalb_Chr24g0395581 Lupinus albus HOM05D003395 ORTHO05D004087 1.1e-27 127.1 252 32.5
SHI33206 Sapria himalayana HOM05D003395 ORTHO05D004087 1.5e-27 126.7 191 44.0
GSVIVG01033240001 Vitis vinifera HOM05D003395 ORTHO05D004087 1.5e-27 126.7 253 33.6
Solyc04g016240.3 Solanum lycopersicum HOM05D003395 ORTHO05D004087 1.9e-27 126.3 107 57.0
Cpa.g.sc182.8 Carica papaya HOM05D003395 ORTHO05D004087 2.5e-27 125.9 107 58.9
Gohir.A11G310000 Gossypium hirsutum HOM05D003395 ORTHO05D004087 2.5e-27 125.9 107 54.2
TAR633G2151 Trochodendron aralioides HOM05D003395 ORTHO05D004087 3.3e-27 125.6 253 32.8
Eucgr.K02007 Eucalyptus grandis HOM05D003395 ORTHO05D004087 5.6e-27 124.8 252 32.9
FvH4_6g24390 Fragaria vesca HOM05D003395 ORTHO05D004087 5.6e-27 124.8 253 32.8
FAN05G3635 Fragaria x ananassa HOM05D003395 ORTHO05D004087 5.6e-27 124.8 253 32.8
Sabra12G0023800 Salix brachista HOM05D003395 ORTHO05D004087 5.6e-27 124.8 253 32.8
SHI51863 Sapria himalayana HOM05D003395 ORTHO05D004087 5.6e-27 124.8 147 51.0
Peaxi162Scf00130g00723 Petunia axillaris HOM05D003395 ORTHO05D004087 7.3e-27 124.4 253 32.4
MD12G1080600 Malus domestica HOM05D003395 ORTHO05D004087 9.5e-27 124.0 253 33.6
FAN02G0096 Fragaria x ananassa HOM05D003395 ORTHO05D004087 1.2e-26 123.6 253 32.4
Lalb_Chr14g0373701 Lupinus albus HOM05D003395 ORTHO05D004087 1.2e-26 123.6 252 32.1
MBI13_g36815_MAGBIO Magnolia biondii HOM05D003395 ORTHO05D004087 1.2e-26 123.6 248 33.1
TWI74G0608 Tripterygium wilfordii HOM05D003395 ORTHO05D004087 1.2e-26 123.6 253 32.4
Oeu008171.1 Olea europaea HOM05D003395 ORTHO05D004087 2.1e-26 122.9 107 57.0
Nn7g36372 Nelumbo nucifera HOM05D003395 ORTHO05D004087 2.8e-26 122.5 252 32.5
SHI20623 Sapria himalayana HOM05D003395 ORTHO05D004087 2.8e-26 122.5 205 39.0
COL.COLO4_22300 Corchorus olitorius HOM05D003395 ORTHO05D004087 6.2e-26 121.3 252 32.9
RcHm_v2.0_Chr3g0483381 Rosa chinensis HOM05D003395 ORTHO05D004087 8.0e-26 120.9 253 32.0
Ah.13g076590 Amaranthus hybridus HOM05D003395 ORTHO05D004087 2.3e-25 119.4 253 31.6
SalBow6G3234 Salvia bowleyana HOM05D003395 ORTHO05D004087 2.3e-25 119.4 253 32.0
SalBow1G6094 Salvia bowleyana HOM05D003395 ORTHO05D004087 3.1e-25 119.0 253 32.0
THA.LOC104817509 Tarenaya hassleriana HOM05D003395 ORTHO05D004087 3.1e-25 119.0 253 31.2
Thhalv10005836m.g Eutrema salsugineum HOM05D003395 ORTHO05D004087 5.2e-25 118.2 107 52.3
Cc06_g17870 Coffea canephora HOM05D003395 ORTHO05D004087 1.2e-24 117.1 253 31.2
AL5G38890 Arabidopsis lyrata HOM05D003395 ORTHO05D004087 1.5e-24 116.7 107 50.5
AL4G39710 Arabidopsis lyrata HOM05D003395 ORTHO05D004087 2.0e-24 116.3 107 51.4
AT2G41620 Arabidopsis thaliana HOM05D003395 ORTHO05D004087 2.0e-24 116.3 107 51.4
Carub.0005s2420 Capsella rubella HOM05D003395 ORTHO05D004087 2.0e-24 116.3 107 50.5
ECA236G0559 Erigeron canadensis HOM05D003395 ORTHO05D004087 2.6e-24 115.9 253 30.8
AT3G57350 Arabidopsis thaliana HOM05D003395 ORTHO05D004087 3.4e-24 115.5 107 49.5
A09p50250 Brassica napus HOM05D003395 ORTHO05D004087 3.4e-24 115.5 253 30.0
BraA09t40475Z Brassica rapa HOM05D003395 ORTHO05D004087 3.4e-24 115.5 253 30.0
HanXRQChr04g0125091 Helianthus annuus HOM05D003395 ORTHO05D004087 3.4e-24 115.5 253 31.2
Sp5g05250 Schrenkiella parvula HOM05D003395 ORTHO05D004087 3.4e-24 115.5 253 30.4
BcaC07g40053 Brassica carinata HOM05D003395 ORTHO05D004087 4.4e-24 115.2 253 29.6
C08p32740 Brassica napus HOM05D003395 ORTHO05D004087 4.4e-24 115.2 253 29.6
BolC8t50885H Brassica oleracea HOM05D003395 ORTHO05D004087 4.4e-24 115.2 253 29.6
SHI25400 Sapria himalayana HOM05D003395 ORTHO05D004087 4.4e-24 115.2 102 58.8
MSTRG.26130 Avicennia marina HOM05D003395 ORTHO05D004087 5.8e-24 114.8 253 32.0
Carub.0004s2387 Capsella rubella HOM05D003395 ORTHO05D004087 7.5e-24 114.4 252 30.2
CARHR136710 Cardamine hirsuta HOM05D003395 ORTHO05D004087 7.5e-24 114.4 253 29.6
FAN14G3261 Fragaria x ananassa HOM05D003395 ORTHO05D004087 7.5e-24 114.4 222 34.2
MD14G1076700 Malus domestica HOM05D003395 ORTHO05D004087 7.5e-24 114.4 107 53.3
SHI48926 Sapria himalayana HOM05D003395 ORTHO05D004087 7.5e-24 114.4 147 49.7
Aqoxy2G00226 Aquilegia oxysepala HOM05D003395 ORTHO05D004087 9.8e-24 114.0 251 31.5
Nitab4.5_0000826g0280 Nicotiana tabacum HOM05D003395 ORTHO05D004087 9.8e-24 114.0 253 30.4
Lsat_1_v5_gn_8_82001 Lactuca sativa HOM05D003395 ORTHO05D004087 2.9e-23 112.5 253 31.2
BcaC02g07302 Brassica carinata HOM05D003395 ORTHO05D004087 3.7e-23 112.1 107 49.5
A04p31720 Brassica napus HOM05D003395 ORTHO05D004087 3.7e-23 112.1 107 49.5
BolC4t28411H Brassica oleracea HOM05D003395 ORTHO05D004087 3.7e-23 112.1 107 49.5
BraA04t18629Z Brassica rapa HOM05D003395 ORTHO05D004087 3.7e-23 112.1 107 49.5
EL10Ac3g07130 Beta vulgaris HOM05D003395 ORTHO05D004087 4.9e-23 111.7 253 30.0
PSO210G1603 Papaver somniferum HOM05D003395 ORTHO05D004087 4.9e-23 111.7 107 49.5
PSO210G2967 Papaver somniferum HOM05D003395 ORTHO05D004087 4.9e-23 111.7 107 49.5
BcaB06g29192 Brassica carinata HOM05D003395 ORTHO05D004087 6.4e-23 111.3 107 49.5
Thhalv10016231m.g Eutrema salsugineum HOM05D003395 ORTHO05D004087 6.4e-23 111.3 253 28.9
Os03g0349000 Oryza sativa ssp. japonica HOM05D003395 ORTHO05D004087 8.3e-23 110.9 250 30.0
Sabra15G0021800 Salix brachista HOM05D003395 ORTHO05D004087 1.4e-22 110.2 279 29.4
Migut.K00101 Erythranthe guttata HOM05D003395 ORTHO05D004087 1.9e-22 109.8 107 48.6
Sp4g23860 Schrenkiella parvula HOM05D003395 ORTHO05D004087 1.9e-22 109.8 107 48.6
Sabra15G0019300 Salix brachista HOM05D003395 ORTHO05D004087 2.4e-22 109.4 279 29.4
CDE11G0065 Ceratophyllum demersum HOM05D003395 ORTHO05D004087 3.2e-22 109.0 107 49.5
Aa31LG1G23630 Aethionema arabicum HOM05D003395 ORTHO05D004087 4.1e-22 108.6 107 47.7
SHI28043 Sapria himalayana HOM05D003395 ORTHO05D004087 1.2e-21 107.1 79 68.4
SEGI_19146 Sequoiadendron giganteum HOM05D003395 ORTHO05D004087 1.2e-21 107.1 106 49.1
SHI34448 Sapria himalayana HOM05D003395 ORTHO05D004087 6.0e-21 104.8 154 46.8
HPP92_001326 Vanilla planifolia HOM05D003395 ORTHO05D004087 1.0e-20 104.0 253 28.1
unitig_22.g5792 Utricularia gibba HOM05D003395 ORTHO05D004087 1.7e-20 103.2 109 49.5
Lj1A1126G58 Lonicera japonica HOM05D003395 ORTHO05D004087 3.9e-20 102.1 230 31.3
Lj1A1128G63 Lonicera japonica HOM05D003395 ORTHO05D004087 3.9e-20 102.1 230 31.3
Zm00001eb016760 Zea mays HOM05D003395 ORTHO05D004087 1.1e-19 100.5 189 32.3
C04p69140 Brassica napus HOM05D003395 ORTHO05D004087 4.3e-19 98.6 133 39.1
FAN09G3838 Fragaria x ananassa HOM05D003395 ORTHO05D004087 2.8e-18 95.9 229 31.0
Hma1.2p1_0556F.1_g178050 Hydrangea macrophylla HOM05D003395 ORTHO05D004087 3.6e-18 95.5 84 56.0
SHI43596 Sapria himalayana HOM05D003395 ORTHO05D004087 1.1e-17 94.0 133 46.6
SMO203G0013 Selaginella moellendorffii HOM05D003395 ORTHO05D004087 3.1e-17 92.4 106 41.5
ATR0320G031 Amborella trichopoda HOM05D003395 ORTHO05D004087 5.2e-17 91.7 230 28.3
DCAR_020506 Daucus carota HOM05D003395 ORTHO05D004087 2.0e-16 89.7 90 51.1
Nitab4.5_0006870g0040 Nicotiana tabacum HOM05D003395 ORTHO05D004087 2.6e-16 89.4 232 28.0
Sc19g0006620 Simmondsia chinensis HOM05D003395 ORTHO05D004087 3.4e-16 89.0 230 29.1
AUR62026086 Chenopodium quinoa HOM05D003395 ORTHO05D004087 7.5e-16 87.8 229 28.4
AUR62024500 Chenopodium quinoa HOM05D003395 ORTHO05D004087 2.2e-15 86.3 84 48.8
Pp3c6_19740 Physcomitrium patens HOM05D003395 ORTHO05D004087 1.4e-14 83.6 106 38.7
Mapoly0069s0022 Marchantia polymorpha HOM05D003395 ORTHO05D004087 4.1e-14 82.0 106 37.7
SHI37552 Sapria himalayana HOM05D003395 ORTHO05D004087 3.9e-12 75.5 41 90.2
CBR_g4043 Chara braunii HOM05D003395 ORTHO05D004087 9.5e-11 70.9 110 33.6
SHI37551 Sapria himalayana HOM05D003395 ORTHO05D004087 1.1e-09 67.4 43 79.1
SHI17502 Sapria himalayana HOM05D003395 ORTHO05D004087 1.4e-09 67.0 40 82.5
SHI32634 Sapria himalayana HOM05D003395 ORTHO05D004087 4.4e-08 62.0 35 85.7
Lj3g0025487 Lotus japonicus HOM05D003395 ORTHO05D004087 3.2e-06 55.8 40 65.0
Prupe.7G054800 Prunus persica HOM05D003395 ORTHO05D004087 3.2e-06 55.8 40 65.0


User provided reference genes

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