Gene: Sopen04g008350
General Information
Structural Information
- Species Solanum pennellii
- Gene Identifier Sopen04g008350
- Transcript Identifier Sopen04g008350.1
- Gene Type Coding gene
- Location Spenn-ch04 : 7206428-7215871 : negative
Gene Family Information
- ID HOM05D003395
- #Genes/#Species 202/97
- Phylogenetic origin
- ID ORTHO05D004087
- #Genes/#Species 192/97
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Sopen04g008350.1
Descriptions
- Description Nucleoporin interacting component (Nup93/Nic96-like) family protein | FUNCTIONS IN: protein binding | INVOLVED IN: transport | LOCATED IN: nucleolus | EXPRESSED IN: 24 plant structures | EXPRESSED DURING: 15 growth stages | CONTAINS InterPro DOMAIN/s: Nucleoporin interacting component Nup93/Nic96 | BEST Arabidopsis thaliana protein match is: Nucleoporin interacting component (Nup93/Nic96-like) family protein
- Loading (ortholog descriptions from ath)...
Functional Annotation
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0017056 | IEA | InterPro | structural constituent of nuclear pore | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT3G57350 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005643 | IEA | InterPro | nuclear pore | |
| GO:0005635 | ISO | PLAZA Integrative Orthology | nuclear envelope | AT3G57350 |
| GO:0009506 | ISO | PLAZA Integrative Orthology | plasmodesma | AT2G41620 |
| GO:0005730 | ISO | PLAZA Integrative Orthology | nucleolus | AT2G41620 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR007231 | Nucleoporin interacting component Nup93/Nic96 |
| Mapman id | Description |
|---|---|
| 23.5.1.1.3.1 | Protein translocation.nucleus.nucleocytoplasmic transport.nuclear pore complex (NPC).linker subcomplex.scaffold nucleoporin (NUP93) |