Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI40121 Sapria himalayana HOM05D003395 ORTHO05D004087 1.6e-55 219.2 109 100.0
SHI34448 Sapria himalayana HOM05D003395 ORTHO05D004087 2.8e-28 128.6 76 85.5
SHI10456 Sapria himalayana HOM05D003395 ORTHO05D004087 3.6e-23 111.7 70 82.9
SHI34713 Sapria himalayana HOM05D003395 ORTHO05D004087 6.8e-22 107.5 86 69.8
SHI37551 Sapria himalayana HOM05D003395 ORTHO05D004087 1.3e-20 103.2 51 96.1
Haze_09905 Corylus avellana HOM05D003395 ORTHO05D004087 7.0e-19 97.4 70 67.1
Haze_19814 Corylus avellana HOM05D003395 ORTHO05D004087 1.6e-18 96.3 70 68.6
Haze_19811 Corylus avellana HOM05D003395 ORTHO05D004087 2.0e-18 95.9 70 68.6
Potri.015G026200 Populus trichocarpa HOM05D003395 ORTHO05D004087 1.3e-17 93.2 70 67.1
COL.COLO4_22300 Corchorus olitorius HOM05D003395 ORTHO05D004087 1.5e-16 89.7 70 65.7
Sabra12G0023800 Salix brachista HOM05D003395 ORTHO05D004087 1.9e-16 89.4 70 67.1
Cpa.g.sc182.8 Carica papaya HOM05D003395 ORTHO05D004087 2.5e-16 89.0 70 65.7
GSVIVG01033240001 Vitis vinifera HOM05D003395 ORTHO05D004087 2.5e-16 89.0 70 62.9
ClCG10G015680 Citrullus lanatus HOM05D003395 ORTHO05D004087 3.3e-16 88.6 70 62.9
Thecc.05G151200 Theobroma cacao HOM05D003395 ORTHO05D004087 3.3e-16 88.6 70 65.7
TWI74G0608 Tripterygium wilfordii HOM05D003395 ORTHO05D004087 4.3e-16 88.2 70 62.9
CiPaw.09G039800 Carya illinoinensis HOM05D003395 ORTHO05D004087 5.6e-16 87.8 70 64.3
Sed0021456 Sechium edule HOM05D003395 ORTHO05D004087 5.6e-16 87.8 70 62.9
Glyma.15G010000 Glycine max HOM05D003395 ORTHO05D004087 7.3e-16 87.4 70 65.7
Gorai.007G357300 Gossypium raimondii HOM05D003395 ORTHO05D004087 7.3e-16 87.4 70 64.3
SalBow1G6094 Salvia bowleyana HOM05D003395 ORTHO05D004087 7.3e-16 87.4 70 61.4
Gohir.D11G326700 Gossypium hirsutum HOM05D003395 ORTHO05D004087 9.5e-16 87.0 70 62.9
QL07p003024 Quercus lobata HOM05D003395 ORTHO05D004087 9.5e-16 87.0 70 62.9
Duzib128G1779 Durio zibethinus HOM05D003395 ORTHO05D004087 1.2e-15 86.7 70 61.4
AUR62024500 Chenopodium quinoa HOM05D003395 ORTHO05D004087 2.1e-15 85.9 98 50.0
SalBow6G3234 Salvia bowleyana HOM05D003395 ORTHO05D004087 2.1e-15 85.9 70 58.6
Lalb_Chr24g0395581 Lupinus albus HOM05D003395 ORTHO05D004087 2.8e-15 85.5 70 61.4
Rhsim04G0105700 Rhododendron simsii HOM05D003395 ORTHO05D004087 2.8e-15 85.5 69 60.9
Lj1A1126G58 Lonicera japonica HOM05D003395 ORTHO05D004087 3.6e-15 85.1 70 60.0
Lj1A1128G63 Lonicera japonica HOM05D003395 ORTHO05D004087 3.6e-15 85.1 70 60.0
Manes.11G065000 Manihot esculenta HOM05D003395 ORTHO05D004087 3.6e-15 85.1 70 62.9
Potri.012G034800 Populus trichocarpa HOM05D003395 ORTHO05D004087 3.6e-15 85.1 70 64.3
CSS0000776 Camellia sinensis var. sinensis HOM05D003395 ORTHO05D004087 4.7e-15 84.7 70 60.0
Ca_01074_v3 Cicer arietinum L. HOM05D003395 ORTHO05D004087 6.1e-15 84.3 70 61.4
Medtr2g103370 Medicago truncatula HOM05D003395 ORTHO05D004087 6.1e-15 84.3 70 61.4
Lsat_1_v5_gn_8_82001 Lactuca sativa HOM05D003395 ORTHO05D004087 8.0e-15 84.0 70 60.0
MD14G1076700 Malus domestica HOM05D003395 ORTHO05D004087 8.0e-15 84.0 70 60.0
Migut.K00101 Erythranthe guttata HOM05D003395 ORTHO05D004087 1.0e-14 83.6 70 60.0
Eucgr.K01765 Eucalyptus grandis HOM05D003395 ORTHO05D004087 1.0e-14 83.6 70 58.6
Eucgr.K02007 Eucalyptus grandis HOM05D003395 ORTHO05D004087 1.0e-14 83.6 70 58.6
Psat5g301400 Pisum sativum HOM05D003395 ORTHO05D004087 1.0e-14 83.6 70 61.4
THA.LOC104817509 Tarenaya hassleriana HOM05D003395 ORTHO05D004087 1.0e-14 83.6 70 60.0
MELO3C009808.2 Cucumis melo HOM05D003395 ORTHO05D004087 1.4e-14 83.2 70 60.0
MD12G1080600 Malus domestica HOM05D003395 ORTHO05D004087 1.4e-14 83.2 70 61.4
arahy.Tifrunner.gnm1.ann1.13YWQX Arachis hypogaea HOM05D003395 ORTHO05D004087 1.8e-14 82.8 70 60.0
arahy.Tifrunner.gnm1.ann1.C8DH2G Arachis hypogaea HOM05D003395 ORTHO05D004087 1.8e-14 82.8 70 60.0
AT2G41620 Arabidopsis thaliana HOM05D003395 ORTHO05D004087 2.3e-14 82.4 70 58.6
Aqoxy2G00226 Aquilegia oxysepala HOM05D003395 ORTHO05D004087 3.0e-14 82.0 70 60.0
Thhalv10016231m.g Eutrema salsugineum HOM05D003395 ORTHO05D004087 3.0e-14 82.0 70 58.6
HanXRQChr04g0125091 Helianthus annuus HOM05D003395 ORTHO05D004087 3.0e-14 82.0 70 60.0
SHI25400 Sapria himalayana HOM05D003395 ORTHO05D004087 3.0e-14 82.0 54 79.6
Carub.0004s2387 Capsella rubella HOM05D003395 ORTHO05D004087 4.0e-14 81.6 70 57.1
DCAR_020506 Daucus carota HOM05D003395 ORTHO05D004087 4.0e-14 81.6 70 61.4
Glyma.13G363900 Glycine max HOM05D003395 ORTHO05D004087 4.0e-14 81.6 70 60.0
AL4G39710 Arabidopsis lyrata HOM05D003395 ORTHO05D004087 5.2e-14 81.3 70 57.1
BcaB06g29192 Brassica carinata HOM05D003395 ORTHO05D004087 6.8e-14 80.9 70 57.1
Hma1.2p1_0556F.1_g178050 Hydrangea macrophylla HOM05D003395 ORTHO05D004087 6.8e-14 80.9 71 62.0
TPR.G37242 Trifolium pratense HOM05D003395 ORTHO05D004087 6.8e-14 80.9 70 60.0
vmacro09059 Vaccinium macrocarpon HOM05D003395 ORTHO05D004087 6.8e-14 80.9 69 59.4
CAN.G624.32 Capsicum annuum HOM05D003395 ORTHO05D004087 8.9e-14 80.5 70 62.9
Peaxi162Scf00130g00723 Petunia axillaris HOM05D003395 ORTHO05D004087 8.9e-14 80.5 70 61.4
VMungo1080G0039 Vigna mungo HOM05D003395 ORTHO05D004087 8.9e-14 80.5 70 60.0
Ciclev10004294m.g Citrus clementina HOM05D003395 ORTHO05D004087 1.2e-13 80.1 70 58.6
RcHm_v2.0_Chr3g0483381 Rosa chinensis HOM05D003395 ORTHO05D004087 1.2e-13 80.1 70 58.6
Sp4g23860 Schrenkiella parvula HOM05D003395 ORTHO05D004087 1.2e-13 80.1 70 57.1
CARHR136710 Cardamine hirsuta HOM05D003395 ORTHO05D004087 1.5e-13 79.7 70 55.7
CsaV3_3G040740 Cucumis sativus L. HOM05D003395 ORTHO05D004087 1.5e-13 79.7 70 58.6
Lj3g0013293 Lotus japonicus HOM05D003395 ORTHO05D004087 1.5e-13 79.7 70 60.0
Nitab4.5_0006870g0040 Nicotiana tabacum HOM05D003395 ORTHO05D004087 1.5e-13 79.7 70 61.4
Solyc04g016240.3 Solanum lycopersicum HOM05D003395 ORTHO05D004087 1.5e-13 79.7 70 61.4
Sopen04g008350 Solanum pennellii HOM05D003395 ORTHO05D004087 1.5e-13 79.7 70 61.4
TAR633G2151 Trochodendron aralioides HOM05D003395 ORTHO05D004087 1.5e-13 79.7 70 60.0
MSTRG.26130 Avicennia marina HOM05D003395 ORTHO05D004087 2.0e-13 79.3 70 58.6
CAN.G676.13 Capsicum annuum HOM05D003395 ORTHO05D004087 2.0e-13 79.3 70 61.4
Gohir.A11G310000 Gossypium hirsutum HOM05D003395 ORTHO05D004087 2.0e-13 79.3 64 62.5
CANSAT80G2433 Cannabis sativa HOM05D003395 ORTHO05D004087 2.6e-13 79.0 70 55.7
ECA236G0559 Erigeron canadensis HOM05D003395 ORTHO05D004087 2.6e-13 79.0 70 57.1
Nn7g36372 Nelumbo nucifera HOM05D003395 ORTHO05D004087 2.6e-13 79.0 70 58.6
Lalb_Chr14g0373701 Lupinus albus HOM05D003395 ORTHO05D004087 3.4e-13 78.6 70 57.1
Phvul.005G175500 Phaseolus vulgaris HOM05D003395 ORTHO05D004087 3.4e-13 78.6 70 58.6
HPP92_001326 Vanilla planifolia HOM05D003395 ORTHO05D004087 3.4e-13 78.6 70 57.1
BcaC02g07302 Brassica carinata HOM05D003395 ORTHO05D004087 4.4e-13 78.2 70 55.7
BolC4t28411H Brassica oleracea HOM05D003395 ORTHO05D004087 4.4e-13 78.2 70 55.7
Ah.13g076590 Amaranthus hybridus HOM05D003395 ORTHO05D004087 5.8e-13 77.8 70 55.7
EL10Ac3g07130 Beta vulgaris HOM05D003395 ORTHO05D004087 5.8e-13 77.8 70 54.3
AUR62026086 Chenopodium quinoa HOM05D003395 ORTHO05D004087 5.8e-13 77.8 70 54.3
Cc06_g17870 Coffea canephora HOM05D003395 ORTHO05D004087 5.8e-13 77.8 70 57.1
Dinv39652 Davidia involucrata HOM05D003395 ORTHO05D004087 5.8e-13 77.8 70 58.6
Sp5g05250 Schrenkiella parvula HOM05D003395 ORTHO05D004087 5.8e-13 77.8 70 54.3
Nitab4.5_0000826g0280 Nicotiana tabacum HOM05D003395 ORTHO05D004087 7.5e-13 77.4 70 58.6
Aa31LG1G23630 Aethionema arabicum HOM05D003395 ORTHO05D004087 9.8e-13 77.0 70 54.3
A04p31720 Brassica napus HOM05D003395 ORTHO05D004087 9.8e-13 77.0 70 54.3
C04p69140 Brassica napus HOM05D003395 ORTHO05D004087 9.8e-13 77.0 70 54.3
BraA04t18629Z Brassica rapa HOM05D003395 ORTHO05D004087 9.8e-13 77.0 70 54.3
BcaC07g40053 Brassica carinata HOM05D003395 ORTHO05D004087 1.3e-12 76.6 70 52.9
C08p32740 Brassica napus HOM05D003395 ORTHO05D004087 1.3e-12 76.6 70 52.9
BolC8t50885H Brassica oleracea HOM05D003395 ORTHO05D004087 1.3e-12 76.6 70 52.9
FAN09G3838 Fragaria x ananassa HOM05D003395 ORTHO05D004087 1.3e-12 76.6 70 55.7
AT3G57350 Arabidopsis thaliana HOM05D003395 ORTHO05D004087 1.7e-12 76.3 70 54.3
FvH4_6g24390 Fragaria vesca HOM05D003395 ORTHO05D004087 1.7e-12 76.3 70 55.7
ATR0320G031 Amborella trichopoda HOM05D003395 ORTHO05D004087 2.2e-12 75.9 70 54.3
Oeu008171.1 Olea europaea HOM05D003395 ORTHO05D004087 2.2e-12 75.9 78 51.3
Sc19g0006620 Simmondsia chinensis HOM05D003395 ORTHO05D004087 2.2e-12 75.9 70 55.7
FAN14G3261 Fragaria x ananassa HOM05D003395 ORTHO05D004087 2.9e-12 75.5 70 54.3
MBI13_g36804_MAGBIO Magnolia biondii HOM05D003395 ORTHO05D004087 2.9e-12 75.5 70 57.1
A09p50250 Brassica napus HOM05D003395 ORTHO05D004087 3.7e-12 75.1 70 52.9
BraA09t40475Z Brassica rapa HOM05D003395 ORTHO05D004087 3.7e-12 75.1 70 52.9
FAN05G3635 Fragaria x ananassa HOM05D003395 ORTHO05D004087 3.7e-12 75.1 70 55.7
AL4G39910 Arabidopsis lyrata HOM05D003395 ORTHO05D004087 8.3e-12 73.9 70 52.9
FAN02G0096 Fragaria x ananassa HOM05D003395 ORTHO05D004087 8.3e-12 73.9 70 54.3
Sabra15G0019300 Salix brachista HOM05D003395 ORTHO05D004087 8.3e-12 73.9 82 53.7
Sabra15G0021800 Salix brachista HOM05D003395 ORTHO05D004087 8.3e-12 73.9 82 53.7
Atru.chr1.1149 Acer truncatum HOM05D003395 ORTHO05D004087 1.1e-11 73.6 70 57.1
Carub.0005s2420 Capsella rubella HOM05D003395 ORTHO05D004087 1.9e-11 72.8 70 51.4
Thhalv10005836m.g Eutrema salsugineum HOM05D003395 ORTHO05D004087 2.4e-11 72.4 70 51.4
AL5G38890 Arabidopsis lyrata HOM05D003395 ORTHO05D004087 3.2e-11 72.0 70 51.4
PSO210G1603 Papaver somniferum HOM05D003395 ORTHO05D004087 4.1e-11 71.6 70 50.0
PSO210G2967 Papaver somniferum HOM05D003395 ORTHO05D004087 4.1e-11 71.6 70 50.0
SHI20623 Sapria himalayana HOM05D003395 ORTHO05D004087 7.0e-11 70.9 64 65.6
unitig_22.g5792 Utricularia gibba HOM05D003395 ORTHO05D004087 2.0e-10 69.3 70 51.4
Os03g0349000 Oryza sativa ssp. japonica HOM05D003395 ORTHO05D004087 5.0e-09 64.7 70 50.0
SHI32634 Sapria himalayana HOM05D003395 ORTHO05D004087 1.9e-08 62.8 61 60.7
MBI13_g36815_MAGBIO Magnolia biondii HOM05D003395 ORTHO05D004087 5.6e-08 61.2 73 52.1
SHI51863 Sapria himalayana HOM05D003395 ORTHO05D004087 1.2e-07 60.1 30 96.7
SHI43596 Sapria himalayana HOM05D003395 ORTHO05D004087 3.6e-07 58.5 30 93.3
SEGI_19146 Sequoiadendron giganteum HOM05D003395 ORTHO05D004087 4.7e-07 58.2 70 44.3
SHI37781 Sapria himalayana HOM05D003395 ORTHO05D004087 1.1e-06 57.0 45 66.7
CDE11G0065 Ceratophyllum demersum HOM05D003395 ORTHO05D004087 5.2e-06 54.7 70 44.3


User provided reference genes

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