Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI37551 Sapria himalayana HOM05D003395 ORTHO05D004087 4.1e-50 201.1 99 100.0
SHI34448 Sapria himalayana HOM05D003395 ORTHO05D004087 2.8e-38 161.8 101 84.2
SHI10456 Sapria himalayana HOM05D003395 ORTHO05D004087 6.6e-32 140.6 99 75.8
SHI34713 Sapria himalayana HOM05D003395 ORTHO05D004087 3.2e-26 121.7 98 67.3
Haze_09905 Corylus avellana HOM05D003395 ORTHO05D004087 2.8e-22 108.6 99 54.5
Lj1A1126G58 Lonicera japonica HOM05D003395 ORTHO05D004087 8.9e-21 103.6 99 54.5
Lj1A1128G63 Lonicera japonica HOM05D003395 ORTHO05D004087 8.9e-21 103.6 99 54.5
Cpa.g.sc182.8 Carica papaya HOM05D003395 ORTHO05D004087 1.2e-20 103.2 99 55.6
Haze_19811 Corylus avellana HOM05D003395 ORTHO05D004087 1.2e-20 103.2 99 54.5
SHI40121 Sapria himalayana HOM05D003395 ORTHO05D004087 1.2e-20 103.2 51 96.1
Rhsim04G0105700 Rhododendron simsii HOM05D003395 ORTHO05D004087 1.5e-20 102.8 99 52.5
TWI74G0608 Tripterygium wilfordii HOM05D003395 ORTHO05D004087 1.5e-20 102.8 99 54.5
CiPaw.09G039800 Carya illinoinensis HOM05D003395 ORTHO05D004087 2.0e-20 102.4 99 53.5
ClCG10G015680 Citrullus lanatus HOM05D003395 ORTHO05D004087 2.0e-20 102.4 99 53.5
Haze_19814 Corylus avellana HOM05D003395 ORTHO05D004087 2.0e-20 102.4 99 54.5
Thecc.05G151200 Theobroma cacao HOM05D003395 ORTHO05D004087 2.0e-20 102.4 98 56.1
Potri.015G026200 Populus trichocarpa HOM05D003395 ORTHO05D004087 4.4e-20 101.3 95 55.8
MELO3C009808.2 Cucumis melo HOM05D003395 ORTHO05D004087 7.5e-20 100.5 99 53.5
Gohir.A11G310000 Gossypium hirsutum HOM05D003395 ORTHO05D004087 7.5e-20 100.5 99 53.5
Duzib128G1779 Durio zibethinus HOM05D003395 ORTHO05D004087 9.8e-20 100.1 99 53.5
Gohir.D11G326700 Gossypium hirsutum HOM05D003395 ORTHO05D004087 9.8e-20 100.1 99 53.5
Gorai.007G357300 Gossypium raimondii HOM05D003395 ORTHO05D004087 9.8e-20 100.1 99 53.5
GSVIVG01033240001 Vitis vinifera HOM05D003395 ORTHO05D004087 9.8e-20 100.1 99 53.5
Glyma.15G010000 Glycine max HOM05D003395 ORTHO05D004087 1.3e-19 99.8 99 54.5
Psat5g301400 Pisum sativum HOM05D003395 ORTHO05D004087 1.7e-19 99.4 99 53.5
Sed0021456 Sechium edule HOM05D003395 ORTHO05D004087 1.7e-19 99.4 99 52.5
vmacro09059 Vaccinium macrocarpon HOM05D003395 ORTHO05D004087 2.2e-19 99.0 99 51.5
CSS0000776 Camellia sinensis var. sinensis HOM05D003395 ORTHO05D004087 2.9e-19 98.6 98 53.1
Lj3g0013293 Lotus japonicus HOM05D003395 ORTHO05D004087 2.9e-19 98.6 99 55.6
QL07p003024 Quercus lobata HOM05D003395 ORTHO05D004087 2.9e-19 98.6 99 52.5
SalBow1G6094 Salvia bowleyana HOM05D003395 ORTHO05D004087 2.9e-19 98.6 99 52.5
Medtr2g103370 Medicago truncatula HOM05D003395 ORTHO05D004087 3.7e-19 98.2 99 53.5
Ca_01074_v3 Cicer arietinum L. HOM05D003395 ORTHO05D004087 4.9e-19 97.8 99 52.5
COL.COLO4_22300 Corchorus olitorius HOM05D003395 ORTHO05D004087 4.9e-19 97.8 99 52.5
TAR633G2151 Trochodendron aralioides HOM05D003395 ORTHO05D004087 6.4e-19 97.4 99 51.5
Migut.K00101 Erythranthe guttata HOM05D003395 ORTHO05D004087 8.3e-19 97.1 99 51.5
Eucgr.K02007 Eucalyptus grandis HOM05D003395 ORTHO05D004087 8.3e-19 97.1 99 51.5
Nn7g36372 Nelumbo nucifera HOM05D003395 ORTHO05D004087 8.3e-19 97.1 99 53.5
SalBow6G3234 Salvia bowleyana HOM05D003395 ORTHO05D004087 8.3e-19 97.1 99 50.5
Sabra12G0023800 Salix brachista HOM05D003395 ORTHO05D004087 1.1e-18 96.7 94 55.3
arahy.Tifrunner.gnm1.ann1.13YWQX Arachis hypogaea HOM05D003395 ORTHO05D004087 1.4e-18 96.3 99 50.5
arahy.Tifrunner.gnm1.ann1.C8DH2G Arachis hypogaea HOM05D003395 ORTHO05D004087 1.4e-18 96.3 99 50.5
DCAR_020506 Daucus carota HOM05D003395 ORTHO05D004087 1.4e-18 96.3 99 53.5
Hma1.2p1_0556F.1_g178050 Hydrangea macrophylla HOM05D003395 ORTHO05D004087 1.4e-18 96.3 100 54.0
AL4G39710 Arabidopsis lyrata HOM05D003395 ORTHO05D004087 1.9e-18 95.9 99 49.5
Manes.11G065000 Manihot esculenta HOM05D003395 ORTHO05D004087 2.4e-18 95.5 95 54.7
AT2G41620 Arabidopsis thaliana HOM05D003395 ORTHO05D004087 3.2e-18 95.1 99 49.5
CsaV3_3G040740 Cucumis sativus L. HOM05D003395 ORTHO05D004087 3.2e-18 95.1 99 51.5
Potri.012G034800 Populus trichocarpa HOM05D003395 ORTHO05D004087 3.2e-18 95.1 98 54.1
Carub.0004s2387 Capsella rubella HOM05D003395 ORTHO05D004087 4.1e-18 94.7 99 48.5
Cc06_g17870 Coffea canephora HOM05D003395 ORTHO05D004087 4.1e-18 94.7 99 51.5
Glyma.13G363900 Glycine max HOM05D003395 ORTHO05D004087 4.1e-18 94.7 99 51.5
Lsat_1_v5_gn_8_82001 Lactuca sativa HOM05D003395 ORTHO05D004087 4.1e-18 94.7 96 51.0
Nitab4.5_0006870g0040 Nicotiana tabacum HOM05D003395 ORTHO05D004087 4.1e-18 94.7 99 51.5
MD12G1080600 Malus domestica HOM05D003395 ORTHO05D004087 5.4e-18 94.4 99 52.5
Peaxi162Scf00130g00723 Petunia axillaris HOM05D003395 ORTHO05D004087 5.4e-18 94.4 99 51.5
Sopen04g008350 Solanum pennellii HOM05D003395 ORTHO05D004087 5.4e-18 94.4 99 50.5
CANSAT80G2433 Cannabis sativa HOM05D003395 ORTHO05D004087 7.0e-18 94.0 99 51.5
CAN.G676.13 Capsicum annuum HOM05D003395 ORTHO05D004087 7.0e-18 94.0 98 52.0
TPR.G37242 Trifolium pratense HOM05D003395 ORTHO05D004087 7.0e-18 94.0 99 52.5
Dinv39652 Davidia involucrata HOM05D003395 ORTHO05D004087 9.2e-18 93.6 99 52.5
ATR0320G031 Amborella trichopoda HOM05D003395 ORTHO05D004087 1.2e-17 93.2 98 49.0
Thhalv10016231m.g Eutrema salsugineum HOM05D003395 ORTHO05D004087 1.2e-17 93.2 99 47.5
Solyc04g016240.3 Solanum lycopersicum HOM05D003395 ORTHO05D004087 1.6e-17 92.8 99 49.5
THA.LOC104817509 Tarenaya hassleriana HOM05D003395 ORTHO05D004087 1.6e-17 92.8 99 49.5
HPP92_001326 Vanilla planifolia HOM05D003395 ORTHO05D004087 1.6e-17 92.8 100 48.0
Ciclev10004294m.g Citrus clementina HOM05D003395 ORTHO05D004087 2.0e-17 92.4 99 50.5
MD14G1076700 Malus domestica HOM05D003395 ORTHO05D004087 2.0e-17 92.4 99 50.5
CARHR136710 Cardamine hirsuta HOM05D003395 ORTHO05D004087 2.7e-17 92.0 99 46.5
Lalb_Chr24g0395581 Lupinus albus HOM05D003395 ORTHO05D004087 3.5e-17 91.7 99 48.5
SHI25400 Sapria himalayana HOM05D003395 ORTHO05D004087 3.5e-17 91.7 91 58.2
Eucgr.K01765 Eucalyptus grandis HOM05D003395 ORTHO05D004087 4.6e-17 91.3 90 53.3
Sp4g23860 Schrenkiella parvula HOM05D003395 ORTHO05D004087 4.6e-17 91.3 99 47.5
MSTRG.26130 Avicennia marina HOM05D003395 ORTHO05D004087 6.0e-17 90.9 95 52.6
BcaC02g07302 Brassica carinata HOM05D003395 ORTHO05D004087 1.0e-16 90.1 99 46.5
A04p31720 Brassica napus HOM05D003395 ORTHO05D004087 1.0e-16 90.1 99 46.5
C04p69140 Brassica napus HOM05D003395 ORTHO05D004087 1.0e-16 90.1 99 46.5
BolC4t28411H Brassica oleracea HOM05D003395 ORTHO05D004087 1.0e-16 90.1 99 46.5
BraA04t18629Z Brassica rapa HOM05D003395 ORTHO05D004087 1.0e-16 90.1 99 46.5
ECA236G0559 Erigeron canadensis HOM05D003395 ORTHO05D004087 1.0e-16 90.1 99 49.5
HanXRQChr04g0125091 Helianthus annuus HOM05D003395 ORTHO05D004087 1.0e-16 90.1 98 49.0
BcaB06g29192 Brassica carinata HOM05D003395 ORTHO05D004087 1.3e-16 89.7 99 46.5
SHI32287 Sapria himalayana HOM05D003395 ORTHO05D004087 1.3e-16 89.7 74 67.6
VMungo1080G0039 Vigna mungo HOM05D003395 ORTHO05D004087 1.3e-16 89.7 96 52.1
Aqoxy2G00226 Aquilegia oxysepala HOM05D003395 ORTHO05D004087 1.7e-16 89.4 97 50.5
Nitab4.5_0000826g0280 Nicotiana tabacum HOM05D003395 ORTHO05D004087 1.7e-16 89.4 99 48.5
RcHm_v2.0_Chr3g0483381 Rosa chinensis HOM05D003395 ORTHO05D004087 1.7e-16 89.4 99 49.5
BcaC07g40053 Brassica carinata HOM05D003395 ORTHO05D004087 3.0e-16 88.6 94 48.9
C08p32740 Brassica napus HOM05D003395 ORTHO05D004087 3.0e-16 88.6 94 48.9
BolC8t50885H Brassica oleracea HOM05D003395 ORTHO05D004087 3.0e-16 88.6 94 48.9
A09p50250 Brassica napus HOM05D003395 ORTHO05D004087 5.0e-16 87.8 94 48.9
BraA09t40475Z Brassica rapa HOM05D003395 ORTHO05D004087 5.0e-16 87.8 94 48.9
CAN.G624.32 Capsicum annuum HOM05D003395 ORTHO05D004087 5.0e-16 87.8 99 49.5
Oeu008171.1 Olea europaea HOM05D003395 ORTHO05D004087 5.0e-16 87.8 107 44.9
Phvul.005G175500 Phaseolus vulgaris HOM05D003395 ORTHO05D004087 5.0e-16 87.8 96 51.0
Sp5g05250 Schrenkiella parvula HOM05D003395 ORTHO05D004087 5.0e-16 87.8 94 47.9
Atru.chr1.1149 Acer truncatum HOM05D003395 ORTHO05D004087 6.6e-16 87.4 97 49.5
Carub.0005s2420 Capsella rubella HOM05D003395 ORTHO05D004087 6.6e-16 87.4 98 45.9
Sc19g0006620 Simmondsia chinensis HOM05D003395 ORTHO05D004087 8.6e-16 87.0 95 50.5
Lalb_Chr14g0373701 Lupinus albus HOM05D003395 ORTHO05D004087 1.1e-15 86.7 99 47.5
SHI27325 Sapria himalayana HOM05D003395 ORTHO05D004087 1.1e-15 86.7 97 54.6
Aa31LG1G23630 Aethionema arabicum HOM05D003395 ORTHO05D004087 1.5e-15 86.3 99 46.5
AT3G57350 Arabidopsis thaliana HOM05D003395 ORTHO05D004087 1.9e-15 85.9 98 45.9
Ah.13g076590 Amaranthus hybridus HOM05D003395 ORTHO05D004087 2.5e-15 85.5 98 45.9
FvH4_6g24390 Fragaria vesca HOM05D003395 ORTHO05D004087 2.5e-15 85.5 99 47.5
PSO210G1603 Papaver somniferum HOM05D003395 ORTHO05D004087 3.3e-15 85.1 99 46.5
PSO210G2967 Papaver somniferum HOM05D003395 ORTHO05D004087 3.3e-15 85.1 99 46.5
AL5G38890 Arabidopsis lyrata HOM05D003395 ORTHO05D004087 4.3e-15 84.7 98 44.9
AUR62024500 Chenopodium quinoa HOM05D003395 ORTHO05D004087 4.3e-15 84.7 90 48.9
AUR62026086 Chenopodium quinoa HOM05D003395 ORTHO05D004087 4.3e-15 84.7 90 48.9
FAN09G3838 Fragaria x ananassa HOM05D003395 ORTHO05D004087 4.3e-15 84.7 99 46.5
FAN05G3635 Fragaria x ananassa HOM05D003395 ORTHO05D004087 5.6e-15 84.3 99 47.5
Thhalv10005836m.g Eutrema salsugineum HOM05D003395 ORTHO05D004087 7.3e-15 84.0 94 46.8
FAN14G3261 Fragaria x ananassa HOM05D003395 ORTHO05D004087 7.3e-15 84.0 99 46.5
FAN02G0096 Fragaria x ananassa HOM05D003395 ORTHO05D004087 1.2e-14 83.2 99 46.5
SHI20623 Sapria himalayana HOM05D003395 ORTHO05D004087 1.6e-14 82.8 81 58.0
EL10Ac3g07130 Beta vulgaris HOM05D003395 ORTHO05D004087 2.8e-14 82.0 90 46.7
unitig_22.g5792 Utricularia gibba HOM05D003395 ORTHO05D004087 4.7e-14 81.3 100 47.0
MBI13_g36815_MAGBIO Magnolia biondii HOM05D003395 ORTHO05D004087 1.1e-13 80.1 92 51.1
Sabra15G0019300 Salix brachista HOM05D003395 ORTHO05D004087 1.5e-12 76.3 107 44.9
Sabra15G0021800 Salix brachista HOM05D003395 ORTHO05D004087 1.5e-12 76.3 107 44.9
MBI13_g36804_MAGBIO Magnolia biondii HOM05D003395 ORTHO05D004087 4.9e-11 71.2 99 47.5
CDE11G0065 Ceratophyllum demersum HOM05D003395 ORTHO05D004087 6.4e-11 70.9 98 42.9
Os03g0349000 Oryza sativa ssp. japonica HOM05D003395 ORTHO05D004087 8.3e-11 70.5 99 42.4
SHI37781 Sapria himalayana HOM05D003395 ORTHO05D004087 8.3e-11 70.5 85 51.8
SHI44367 Sapria himalayana HOM05D003395 ORTHO05D004087 1.9e-10 69.3 43 81.4
SEGI_19146 Sequoiadendron giganteum HOM05D003395 ORTHO05D004087 7.1e-10 67.4 98 38.8
SHI45533 Sapria himalayana HOM05D003395 ORTHO05D004087 9.2e-10 67.0 43 79.1
SHI40120 Sapria himalayana HOM05D003395 ORTHO05D004087 1.6e-09 66.2 38 86.8
SHI34459 Sapria himalayana HOM05D003395 ORTHO05D004087 1.7e-08 62.8 69 56.5
SHI28043 Sapria himalayana HOM05D003395 ORTHO05D004087 1.1e-07 60.1 57 59.6
SMO203G0013 Selaginella moellendorffii HOM05D003395 ORTHO05D004087 1.2e-06 56.6 92 39.1
AL4G39910 Arabidopsis lyrata HOM05D003395 ORTHO05D004087 2.1e-06 55.8 62 48.4
Eucgr.K01721 Eucalyptus grandis HOM05D003395 ORTHO05D004087 3.6e-06 55.1 67 43.3


User provided reference genes

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