Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI34820 Sapria himalayana HOM05D000392 ORTHO05D001257 9.7e-130 466.8 239 100.0
Sopen01g017650 Solanum pennellii HOM05D000002 ORTHO05D002065 1.1e-16 91.3 136 44.9
Sopen01g026180 Solanum pennellii HOM05D000002 ORTHO05D002065 1.1e-16 91.3 136 44.9
Sopen02g013820 Solanum pennellii HOM05D000002 ORTHO05D002065 1.1e-16 91.3 136 44.9
Sopen03g010500 Solanum pennellii HOM05D000002 ORTHO05D002065 1.1e-16 91.3 136 44.9
Sopen04g029040 Solanum pennellii HOM05D000002 ORTHO05D002065 1.1e-16 91.3 136 44.9
Sopen05g027020 Solanum pennellii HOM05D000002 ORTHO05D002065 1.1e-16 91.3 136 44.9
Sopen06g006170 Solanum pennellii HOM05D000002 ORTHO05D002065 1.1e-16 91.3 136 44.9
Sopen06g028770 Solanum pennellii HOM05D000002 ORTHO05D002065 1.1e-16 91.3 136 44.9
Sopen07g029130 Solanum pennellii HOM05D000002 ORTHO05D002065 1.1e-16 91.3 136 44.9
Sopen10g028630 Solanum pennellii HOM05D000002 ORTHO05D002065 1.1e-16 91.3 136 44.9
Sopen11g017390 Solanum pennellii HOM05D000002 ORTHO05D002065 1.1e-16 91.3 136 44.9
Sopen11g024400 Solanum pennellii HOM05D000002 ORTHO05D002065 1.1e-16 91.3 136 44.9
Sopen12g007900 Solanum pennellii HOM05D000002 ORTHO05D002065 1.1e-16 91.3 136 44.9
Sopen12g008380 Solanum pennellii HOM05D000002 ORTHO05D002065 1.1e-16 91.3 136 44.9
Rhsim03G0114900 Rhododendron simsii HOM05D000002 ORTHO05D002065 3.2e-16 89.7 136 44.1
Sopen03g006780 Solanum pennellii HOM05D000002 ORTHO05D002065 3.2e-16 89.7 136 44.1
Sopen11g008810 Solanum pennellii HOM05D000002 ORTHO05D002065 3.2e-16 89.7 136 44.1
Rhsim01G0238600 Rhododendron simsii HOM05D000002 ORTHO05D002065 9.3e-16 88.2 136 43.4
Rhsim07G0041900 Rhododendron simsii HOM05D000002 ORTHO05D002065 9.3e-16 88.2 136 43.4
Sopen04g007530 Solanum pennellii HOM05D000002 ORTHO05D002065 1.6e-15 87.4 136 44.1
Sopen04g022960 Solanum pennellii HOM05D000002 ORTHO05D002065 2.1e-15 87.0 117 46.2
SHI11733 Sapria himalayana HOM05D000002 ORTHO05D002065 2.7e-15 86.7 152 38.8
SHI17097 Sapria himalayana HOM05D000392 ORTHO05D001257 2.7e-15 86.7 84 57.1
SHI11939 Sapria himalayana HOM05D000392 ORTHO05D002065 7.9e-15 85.1 67 67.2
SHI17867 Sapria himalayana HOM05D000392 ORTHO05D002065 7.9e-15 85.1 82 54.9
Sopen04g006280 Solanum pennellii HOM05D000392 ORTHO05D002065 7.9e-15 85.1 136 40.4
Sopen01g024170 Solanum pennellii HOM05D000002 ORTHO05D002065 1.3e-14 84.3 136 41.9
Sopen01g026840 Solanum pennellii HOM05D000002 ORTHO05D002065 1.3e-14 84.3 136 41.9
Sopen02g016360 Solanum pennellii HOM05D000002 ORTHO05D002065 1.3e-14 84.3 136 41.9
Sopen03g026840 Solanum pennellii HOM05D000002 ORTHO05D002065 1.3e-14 84.3 136 41.9
Sopen04g027510 Solanum pennellii HOM05D002075 ORTHO05D002065 1.3e-14 84.3 136 41.9
Sopen05g014660 Solanum pennellii HOM05D000002 ORTHO05D002065 1.3e-14 84.3 136 41.9
Sopen05g029240 Solanum pennellii HOM05D000392 ORTHO05D002065 1.3e-14 84.3 136 41.9
Sopen06g012160 Solanum pennellii HOM05D000002 ORTHO05D002065 1.3e-14 84.3 136 41.9
Sopen06g014830 Solanum pennellii HOM05D000002 ORTHO05D002065 1.3e-14 84.3 136 41.9
Sopen07g029700 Solanum pennellii HOM05D000392 ORTHO05D002065 1.3e-14 84.3 136 41.9
Sopen08g005170 Solanum pennellii HOM05D000002 ORTHO05D002065 1.3e-14 84.3 136 41.9
Sopen09g024720 Solanum pennellii HOM05D000392 ORTHO05D002065 1.3e-14 84.3 136 41.9
Sopen11g010460 Solanum pennellii HOM05D000002 ORTHO05D002065 1.3e-14 84.3 136 41.9
Sopen11g015820 Solanum pennellii HOM05D000002 ORTHO05D002065 1.3e-14 84.3 136 41.9
Sopen11g025130 Solanum pennellii HOM05D000002 ORTHO05D002065 1.3e-14 84.3 136 41.9
Sopen12g021690 Solanum pennellii HOM05D000002 ORTHO05D002065 1.3e-14 84.3 136 41.9
SHI16420 Sapria himalayana HOM05D000392 ORTHO05D002065 1.8e-14 84.0 72 61.1
SHI19968 Sapria himalayana HOM05D000392 ORTHO05D002065 2.3e-14 83.6 99 50.5
Sopen07g021750 Solanum pennellii HOM05D000002 ORTHO05D002065 2.3e-14 83.6 132 37.9
Sopen10g006760 Solanum pennellii HOM05D000002 ORTHO05D002065 3.0e-14 83.2 136 40.4
SHI11734 Sapria himalayana HOM05D000392 ORTHO05D002065 3.9e-14 82.8 130 43.1
Sopen01g001570 Solanum pennellii HOM05D000392 ORTHO05D002065 3.9e-14 82.8 136 39.7
Sopen01g005920 Solanum pennellii HOM05D000392 ORTHO05D002065 3.9e-14 82.8 136 39.7
Sopen02g010090 Solanum pennellii HOM05D000002 ORTHO05D002065 3.9e-14 82.8 136 39.7
Sopen02g017660 Solanum pennellii HOM05D000392 ORTHO05D002065 3.9e-14 82.8 136 39.7
Sopen02g030500 Solanum pennellii HOM05D000392 ORTHO05D002065 3.9e-14 82.8 136 39.7
Sopen03g036760 Solanum pennellii HOM05D000392 ORTHO05D002065 3.9e-14 82.8 136 39.7
Sopen04g018150 Solanum pennellii HOM05D000006 ORTHO05D002065 3.9e-14 82.8 136 39.7
Sopen04g023800 Solanum pennellii HOM05D000392 ORTHO05D002065 3.9e-14 82.8 136 39.7
Sopen04g025720 Solanum pennellii HOM05D000002 ORTHO05D002065 3.9e-14 82.8 136 39.7
Sopen04g026730 Solanum pennellii HOM05D000392 ORTHO05D002065 3.9e-14 82.8 136 39.7
Sopen05g001590 Solanum pennellii HOM05D000392 ORTHO05D000001 3.9e-14 82.8 136 39.7
Sopen05g006720 Solanum pennellii HOM05D000392 ORTHO05D002065 3.9e-14 82.8 136 39.7
Sopen05g008440 Solanum pennellii HOM05D000002 ORTHO05D002065 3.9e-14 82.8 136 39.7
Sopen05g014110 Solanum pennellii HOM05D000392 ORTHO05D002065 3.9e-14 82.8 136 39.7
Sopen05g026510 Solanum pennellii HOM05D000002 ORTHO05D002065 3.9e-14 82.8 136 41.2
Sopen06g003740 Solanum pennellii HOM05D000392 ORTHO05D002065 3.9e-14 82.8 136 39.7
Sopen06g019790 Solanum pennellii HOM05D000002 ORTHO05D002065 3.9e-14 82.8 136 39.7
Sopen06g020490 Solanum pennellii HOM05D000392 ORTHO05D002065 3.9e-14 82.8 136 39.7
Sopen06g021220 Solanum pennellii HOM05D000392 ORTHO05D002065 3.9e-14 82.8 136 39.7
Sopen06g025370 Solanum pennellii HOM05D000392 ORTHO05D002065 3.9e-14 82.8 136 39.7
Sopen06g029030 Solanum pennellii HOM05D000392 ORTHO05D002065 3.9e-14 82.8 136 39.7
Sopen07g006140 Solanum pennellii HOM05D000002 ORTHO05D002065 3.9e-14 82.8 136 39.7
Sopen07g020050 Solanum pennellii HOM05D000002 ORTHO05D002065 3.9e-14 82.8 136 39.7
Sopen07g022000 Solanum pennellii HOM05D000392 ORTHO05D002065 3.9e-14 82.8 136 39.7
Sopen07g028380 Solanum pennellii HOM05D000392 ORTHO05D002065 3.9e-14 82.8 136 39.7
Sopen07g032760 Solanum pennellii HOM05D000392 ORTHO05D002065 3.9e-14 82.8 136 39.7
Sopen07g033180 Solanum pennellii HOM05D000392 ORTHO05D002065 3.9e-14 82.8 136 39.7
Sopen08g008670 Solanum pennellii HOM05D000002 ORTHO05D002065 3.9e-14 82.8 136 39.7
Sopen08g017740 Solanum pennellii HOM05D000392 ORTHO05D002065 3.9e-14 82.8 136 39.7
Sopen08g029640 Solanum pennellii HOM05D000392 ORTHO05D002065 3.9e-14 82.8 136 39.7
Sopen09g007350 Solanum pennellii HOM05D000392 ORTHO05D002065 3.9e-14 82.8 136 39.7
Sopen09g007940 Solanum pennellii HOM05D000392 ORTHO05D002065 3.9e-14 82.8 136 39.7
Sopen09g010790 Solanum pennellii HOM05D000392 ORTHO05D002065 3.9e-14 82.8 136 39.7
Sopen09g015720 Solanum pennellii HOM05D000392 ORTHO05D002065 3.9e-14 82.8 136 39.7
Sopen09g027600 Solanum pennellii HOM05D000392 ORTHO05D002065 3.9e-14 82.8 136 39.7
Sopen10g006660 Solanum pennellii HOM05D000392 ORTHO05D002065 3.9e-14 82.8 136 39.7
Sopen10g010780 Solanum pennellii HOM05D000002 ORTHO05D002065 3.9e-14 82.8 136 39.7
Sopen10g021220 Solanum pennellii HOM05D000392 ORTHO05D002065 3.9e-14 82.8 136 39.7
Sopen10g021340 Solanum pennellii HOM05D003930 ORTHO05D004742 3.9e-14 82.8 136 39.7
Sopen10g023800 Solanum pennellii HOM05D000002 ORTHO05D002065 3.9e-14 82.8 136 39.7
Sopen11g016080 Solanum pennellii HOM05D000002 ORTHO05D002065 3.9e-14 82.8 136 39.7
Sopen11g026270 Solanum pennellii HOM05D000392 ORTHO05D002065 3.9e-14 82.8 136 39.7
Sopen12g020430 Solanum pennellii HOM05D000392 ORTHO05D002065 3.9e-14 82.8 136 39.7
Sopen12g023100 Solanum pennellii HOM05D000392 ORTHO05D002065 3.9e-14 82.8 136 39.7
HanXRQChr17g0541591 Helianthus annuus HOM05D000002 ORTHO05D002065 5.1e-14 82.4 119 43.7
SHI08873 Sapria himalayana HOM05D000392 ORTHO05D002065 5.1e-14 82.4 92 52.2
Sopen01g006130 Solanum pennellii HOM05D000002 ORTHO05D002065 5.1e-14 82.4 136 41.2
Sopen01g019060 Solanum pennellii HOM05D000002 ORTHO05D002065 5.1e-14 82.4 136 41.2
Sopen02g022990 Solanum pennellii HOM05D000392 ORTHO05D001257 5.1e-14 82.4 136 39.7
Sopen05g021470 Solanum pennellii HOM05D000002 ORTHO05D002065 5.1e-14 82.4 136 41.2
Sopen08g025440 Solanum pennellii HOM05D000002 ORTHO05D002065 5.1e-14 82.4 136 41.2
Sopen09g025530 Solanum pennellii HOM05D000004 ORTHO05D000002 5.1e-14 82.4 136 41.2
Sopen09g029440 Solanum pennellii HOM05D000002 ORTHO05D002065 5.1e-14 82.4 136 41.2
Sopen12g009220 Solanum pennellii HOM05D000392 ORTHO05D002065 5.1e-14 82.4 136 41.2
Sopen03g014380 Solanum pennellii HOM05D000002 ORTHO05D002065 6.7e-14 82.0 136 41.2
Sopen04g013080 Solanum pennellii HOM05D000002 ORTHO05D002065 6.7e-14 82.0 177 34.5
SHI29199 Sapria himalayana HOM05D000392 ORTHO05D002065 1.9e-13 80.5 90 54.4
Sopen04g024530 Solanum pennellii HOM05D000002 ORTHO05D002065 1.9e-13 80.5 136 40.4
Sopen07g004880 Solanum pennellii HOM05D000002 ORTHO05D002065 1.9e-13 80.5 136 39.0
Sopen08g010130 Solanum pennellii HOM05D000002 ORTHO05D002065 3.3e-13 79.7 136 40.4
PSO357G0244 Papaver somniferum HOM05D000392 ORTHO05D000610 5.7e-13 79.0 119 41.2
SHI13054 Sapria himalayana HOM05D000392 ORTHO05D002065 5.7e-13 79.0 67 64.2
FvH4_7g15611 Fragaria vesca HOM05D000392 ORTHO05D002065 9.7e-13 78.2 136 40.4
SHI04536 Sapria himalayana HOM05D000392 ORTHO05D002065 9.7e-13 78.2 67 62.7
SHI37500 Sapria himalayana HOM05D000002 ORTHO05D002065 9.7e-13 78.2 95 49.5
Sopen02g003080 Solanum pennellii HOM05D000002 ORTHO05D002065 9.7e-13 78.2 116 40.5
RcHm_v2.0_Chr4g0392871 Rosa chinensis HOM05D000002 ORTHO05D002065 1.3e-12 77.8 136 39.7
RcHm_v2.0_Chr7g0218471 Rosa chinensis HOM05D000002 ORTHO05D002065 1.3e-12 77.8 136 39.7
Sopen08g004970 Solanum pennellii HOM05D000392 ORTHO05D000610 1.3e-12 77.8 115 42.6
Sopen11g021220 Solanum pennellii HOM05D000392 ORTHO05D000610 1.3e-12 77.8 231 32.5
ECA233G3654 Erigeron canadensis HOM05D000392 ORTHO05D002065 1.6e-12 77.4 118 38.1
SHI08874 Sapria himalayana HOM05D000392 ORTHO05D002065 1.6e-12 77.4 67 61.2
Sopen08g016220 Solanum pennellii HOM05D000392 ORTHO05D000610 1.6e-12 77.4 218 30.3
Sopen10g024560 Solanum pennellii HOM05D000002 ORTHO05D002065 2.2e-12 77.0 93 46.2
Sopen01g036580 Solanum pennellii HOM05D000002 ORTHO05D002065 3.7e-12 76.3 93 46.2
Sopen03g030560 Solanum pennellii HOM05D000002 ORTHO05D002065 3.7e-12 76.3 93 46.2
Sopen05g008480 Solanum pennellii HOM05D000002 ORTHO05D002065 3.7e-12 76.3 93 46.2
Sopen05g023010 Solanum pennellii HOM05D007477 ORTHO05D002065 3.7e-12 76.3 93 46.2
Sopen11g025450 Solanum pennellii HOM05D000002 ORTHO05D002065 3.7e-12 76.3 93 46.2
Sopen12g028980 Solanum pennellii HOM05D000002 ORTHO05D002065 3.7e-12 76.3 93 46.2
RcHm_v2.0_Chr2g0163801 Rosa chinensis HOM05D000002 ORTHO05D002065 4.8e-12 75.9 136 37.5
RcHm_v2.0_Chr7g0186831 Rosa chinensis HOM05D000002 ORTHO05D002065 4.8e-12 75.9 136 37.5
Sopen06g017280 Solanum pennellii HOM05D000002 ORTHO05D002065 4.8e-12 75.9 93 45.2
ECA236G2047 Erigeron canadensis HOM05D000002 ORTHO05D002065 8.2e-12 75.1 118 37.3
Sopen03g009140 Solanum pennellii HOM05D000392 ORTHO05D002065 1.4e-11 74.3 93 45.2
TPR.G16794 Trifolium pratense HOM05D000002 ORTHO05D002065 1.8e-11 73.9 95 43.2
Sopen08g012500 Solanum pennellii HOM05D000002 ORTHO05D002065 2.4e-11 73.6 92 45.7
Sopen09g011890 Solanum pennellii HOM05D000002 ORTHO05D000001 3.1e-11 73.2 67 56.7
SHI13819 Sapria himalayana HOM05D000392 ORTHO05D002065 9.0e-11 71.6 67 59.7
ECA232G1868 Erigeron canadensis HOM05D000002 ORTHO05D002065 1.5e-10 70.9 95 42.1
CANSAT56G2308 Cannabis sativa HOM05D000002 ORTHO05D002065 2.6e-10 70.1 100 39.0
FvH4_3g41702 Fragaria vesca HOM05D000002 ORTHO05D002065 2.6e-10 70.1 136 39.0
SHI16421 Sapria himalayana HOM05D000002 ORTHO05D002065 3.4e-10 69.7 106 43.4
SHI18174 Sapria himalayana HOM05D000002 ORTHO05D002065 3.4e-10 69.7 123 37.4
Sopen11g024270 Solanum pennellii HOM05D000002 ORTHO05D002065 3.4e-10 69.7 92 43.5
SHI27556 Sapria himalayana HOM05D000392 ORTHO05D001257 5.9e-10 68.9 52 67.3
Sopen09g031920 Solanum pennellii HOM05D000002 ORTHO05D002065 7.7e-10 68.6 126 38.1
Sopen12g022710 Solanum pennellii HOM05D000002 ORTHO05D002065 7.7e-10 68.6 92 44.6
CAN.G1627.8 Capsicum annuum HOM05D003021 ORTHO05D002065 2.9e-09 66.6 95 38.9
Sopen12g021410 Solanum pennellii HOM05D000002 ORTHO05D002065 2.9e-09 66.6 92 42.4
SHI29116 Sapria himalayana HOM05D000392 ORTHO05D000610 5.0e-09 65.9 152 37.5
FvH4_4g13932 Fragaria vesca HOM05D000392 ORTHO05D001257 6.5e-09 65.5 69 49.3
SHI25639 Sapria himalayana HOM05D000392 ORTHO05D000610 6.5e-09 65.5 156 37.8
Sopen06g018660 Solanum pennellii HOM05D000392 ORTHO05D002065 8.5e-09 65.1 114 39.5
SHI00237 Sapria himalayana HOM05D000392 ORTHO05D001257 1.1e-08 64.7 55 67.3
Sopen05g016150 Solanum pennellii HOM05D000002 ORTHO05D002065 1.1e-08 64.7 90 37.8
Sopen02g022980 Solanum pennellii HOM05D000002 ORTHO05D002065 1.4e-08 64.3 90 36.7
Sopen03g018110 Solanum pennellii HOM05D000002 ORTHO05D002065 1.4e-08 64.3 90 36.7
Sopen04g008860 Solanum pennellii HOM05D000002 ORTHO05D002065 1.4e-08 64.3 90 36.7
Sopen05g025330 Solanum pennellii HOM05D000002 ORTHO05D002065 1.4e-08 64.3 90 36.7
Sopen09g030360 Solanum pennellii HOM05D000002 ORTHO05D002065 1.4e-08 64.3 90 36.7
Sopen11g010530 Solanum pennellii HOM05D000002 ORTHO05D002065 1.4e-08 64.3 90 36.7
PSO063G2516 Papaver somniferum HOM05D000392 ORTHO05D001257 1.9e-08 63.9 116 36.2
RhsimUnG0247500 Rhododendron simsii HOM05D000002 ORTHO05D002065 1.9e-08 63.9 95 38.9
arahy.Tifrunner.gnm1.ann1.W44XNY Arachis hypogaea HOM05D000392 ORTHO05D001257 2.5e-08 63.5 67 58.2
Sopen03g024570 Solanum pennellii HOM05D000002 ORTHO05D002065 2.5e-08 63.5 90 36.7
SHI05129 Sapria himalayana HOM05D000392 ORTHO05D002065 3.2e-08 63.2 132 36.4
Sopen01g021430 Solanum pennellii HOM05D002156 ORTHO05D002328 3.2e-08 63.2 84 42.9
Sopen02g003420 Solanum pennellii HOM05D000002 ORTHO05D002065 3.2e-08 63.2 83 39.8
PSO063G0333 Papaver somniferum HOM05D000392 ORTHO05D001257 7.2e-08 62.0 69 46.4
Sopen07g012530 Solanum pennellii HOM05D000002 ORTHO05D002065 1.2e-07 61.2 90 35.6
SHI26025 Sapria himalayana HOM05D000002 ORTHO05D002065 1.0e-06 58.2 111 39.6
ECA246G1630 Erigeron canadensis HOM05D000002 ORTHO05D002065 1.4e-06 57.8 92 35.9
Sopen03g021380 Solanum pennellii HOM05D000047 ORTHO05D000044 1.8e-06 57.4 83 38.6
SHI26026 Sapria himalayana HOM05D000392 ORTHO05D002065 3.0e-06 56.6 62 51.6
SHI00647 Sapria himalayana HOM05D000392 ORTHO05D002065 5.1e-06 55.8 49 59.2
ECA246G2492 Erigeron canadensis HOM05D000002 ORTHO05D002065 6.7e-06 55.5 92 35.9
FvH4_4g13933 Fragaria vesca HOM05D000002 ORTHO05D002065 8.8e-06 55.1 95 32.6


User provided reference genes

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