Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI34396 Sapria himalayana HOM05D033944 ORTHO05D367519 7.7e-74 280.4 144 100.0
SHI15790 Sapria himalayana HOM05D028598 ORTHO05D366614 1.7e-36 156.4 121 71.1
SHI32990 Sapria himalayana HOM05D033944 ORTHO05D369419 1.9e-16 89.7 133 45.9
Haze_01083 Corylus avellana HOM05D001397 ORTHO05D001300 1.4e-14 83.6 101 46.5
SHI15035 Sapria himalayana HOM05D001397 ORTHO05D001300 1.4e-14 83.6 62 72.6
Potri.010G141100 Populus trichocarpa HOM05D001397 ORTHO05D001300 5.3e-14 81.6 96 49.0
Lalb_Chr07g0182161 Lupinus albus HOM05D001397 ORTHO05D001300 6.9e-14 81.3 100 47.0
Lalb_Chr12g0200971 Lupinus albus HOM05D001397 ORTHO05D001300 6.9e-14 81.3 100 48.0
Glyma.07G242500 Glycine max HOM05D001397 ORTHO05D001300 1.2e-13 80.5 100 47.0
Actinidia15586 Actinidia chinensis HOM05D001397 ORTHO05D001300 2.0e-13 79.7 101 46.5
MD13G1157700 Malus domestica HOM05D001397 ORTHO05D001300 3.4e-13 79.0 94 45.7
Sabra10G0109100 Salix brachista HOM05D001397 ORTHO05D001300 3.4e-13 79.0 96 46.9
Glyma.17G031700 Glycine max HOM05D001397 ORTHO05D001300 9.9e-13 77.4 100 46.0
Ciclev10004794m.g Citrus clementina HOM05D001397 ORTHO05D001300 1.3e-12 77.0 97 47.4
Duzib151G1064 Durio zibethinus HOM05D001397 ORTHO05D001300 1.3e-12 77.0 102 44.1
Ca_21458_v3 Cicer arietinum L. HOM05D001397 ORTHO05D001300 2.2e-12 76.3 96 45.8
Actinidia40355 Actinidia chinensis HOM05D001397 ORTHO05D001300 2.9e-12 75.9 101 45.5
Dinv44315 Davidia involucrata HOM05D001397 ORTHO05D001300 6.4e-12 74.7 97 47.4
Gohir.A10G168200 Gossypium hirsutum HOM05D001397 ORTHO05D001300 6.4e-12 74.7 102 44.1
Gohir.D10G174300 Gossypium hirsutum HOM05D001397 ORTHO05D001300 6.4e-12 74.7 102 44.1
Medtr4g121470 Medicago truncatula HOM05D001397 ORTHO05D001300 6.4e-12 74.7 97 45.4
RcHm_v2.0_Chr4g0424341 Rosa chinensis HOM05D001397 ORTHO05D001300 8.4e-12 74.3 101 43.6
Hma1.2p1_0013F.1_g008900 Hydrangea macrophylla HOM05D001397 ORTHO05D001300 1.1e-11 73.9 103 44.7
MD16G1158700 Malus domestica HOM05D001397 ORTHO05D001300 1.4e-11 73.6 102 42.2
Psat4g023200 Pisum sativum HOM05D001397 ORTHO05D001300 1.4e-11 73.6 97 44.3
Prupe.1G125200 Prunus persica HOM05D001397 ORTHO05D001300 1.4e-11 73.6 102 41.2
FAN07G0820 Fragaria x ananassa HOM05D001397 ORTHO05D001300 1.9e-11 73.2 100 44.0
Gorai.011G195000 Gossypium raimondii HOM05D001397 ORTHO05D001300 1.9e-11 73.2 102 44.1
VMungo1215G1129 Vigna mungo HOM05D001397 ORTHO05D001300 1.9e-11 73.2 101 43.6
Migut.G00102 Erythranthe guttata HOM05D001397 ORTHO05D001300 3.2e-11 72.4 95 44.2
vmacro08073 Vaccinium macrocarpon HOM05D001397 ORTHO05D001300 3.2e-11 72.4 107 44.9
Cfa015482 Carpinus fangiana HOM05D001397 ORTHO05D001300 4.2e-11 72.0 95 43.2
FvH4_4g19320 Fragaria vesca HOM05D001397 ORTHO05D001300 4.2e-11 72.0 100 44.0
FAN12G0297 Fragaria x ananassa HOM05D001397 ORTHO05D001300 4.2e-11 72.0 100 44.0
FAN12G1942 Fragaria x ananassa HOM05D001397 ORTHO05D001300 4.2e-11 72.0 100 44.0
Lj4g0024053 Lotus japonicus HOM05D001397 ORTHO05D001300 4.2e-11 72.0 99 43.4
QL06p011440 Quercus lobata HOM05D001397 ORTHO05D001300 4.2e-11 72.0 101 43.6
TPR.G16832 Trifolium pratense HOM05D001397 ORTHO05D001300 4.2e-11 72.0 91 46.2
CiPaw.01G141800 Carya illinoinensis HOM05D001397 ORTHO05D001300 5.4e-11 71.6 99 44.4
Nn4g25646 Nelumbo nucifera HOM05D001397 ORTHO05D001300 5.4e-11 71.6 95 45.3
PSO210G5422 Papaver somniferum HOM05D001397 ORTHO05D001300 5.4e-11 71.6 100 44.0
GSVIVG01035040001 Vitis vinifera HOM05D001397 ORTHO05D001300 5.4e-11 71.6 96 43.8
arahy.Tifrunner.gnm1.ann1.7GLL8J Arachis hypogaea HOM05D001397 ORTHO05D001300 7.1e-11 71.2 100 44.0
arahy.Tifrunner.gnm1.ann1.H5PABG Arachis hypogaea HOM05D001397 ORTHO05D001300 7.1e-11 71.2 100 44.0
CSS0046459 Camellia sinensis var. sinensis HOM05D001397 ORTHO05D001300 7.1e-11 71.2 97 43.3
Gohir.A09G064600 Gossypium hirsutum HOM05D001397 ORTHO05D001300 7.1e-11 71.2 98 43.9
PGSC0003DMG400007555 Solanum tuberosum HOM05D001397 ORTHO05D001300 7.1e-11 71.2 99 44.4
Atru.chr4.2963 Acer truncatum HOM05D001397 ORTHO05D001300 9.3e-11 70.9 101 41.6
Gohir.D09G063400 Gossypium hirsutum HOM05D001397 ORTHO05D001300 9.3e-11 70.9 98 43.9
Phvul.003G111000 Phaseolus vulgaris HOM05D001397 ORTHO05D001300 1.2e-10 70.5 100 45.0
TWI53G0938 Tripterygium wilfordii HOM05D001397 ORTHO05D001300 1.2e-10 70.5 95 42.1
Manes.03G201800 Manihot esculenta HOM05D001397 ORTHO05D001300 1.6e-10 70.1 101 41.6
TWI73G0765 Tripterygium wilfordii HOM05D001397 ORTHO05D001300 1.6e-10 70.1 95 44.2
COL.COLO4_34663 Corchorus olitorius HOM05D001397 ORTHO05D001300 2.1e-10 69.7 100 41.0
Duzib052G0940 Durio zibethinus HOM05D001397 ORTHO05D001300 2.1e-10 69.7 97 43.3
Nitab4.5_0005333g0020 Nicotiana tabacum HOM05D001397 ORTHO05D001300 2.1e-10 69.7 97 44.3
Sopen01g026500 Solanum pennellii HOM05D001397 ORTHO05D001300 2.1e-10 69.7 100 45.0
CiPaw.02G076600 Carya illinoinensis HOM05D001397 ORTHO05D001300 2.7e-10 69.3 98 38.8
Lsat_1_v5_gn_1_44040 Lactuca sativa HOM05D001397 ORTHO05D001300 2.7e-10 69.3 105 43.8
Lj3A827G68 Lonicera japonica HOM05D001397 ORTHO05D001300 2.7e-10 69.3 101 41.6
PSO761G0705 Papaver somniferum HOM05D001397 ORTHO05D001300 2.7e-10 69.3 100 43.0
Rhsim04G0232600 Rhododendron simsii HOM05D001397 ORTHO05D001300 2.7e-10 69.3 88 46.6
Cc03_g01130 Coffea canephora HOM05D001397 ORTHO05D001300 4.6e-10 68.6 109 42.2
Gorai.006G078500 Gossypium raimondii HOM05D001397 ORTHO05D001300 4.6e-10 68.6 98 42.9
Nitab4.5_0000169g0060 Nicotiana tabacum HOM05D001397 ORTHO05D001300 4.6e-10 68.6 97 43.3
SGA_v2.0_scaffold18G08385 Striga asiatica HOM05D001397 ORTHO05D001300 4.6e-10 68.6 95 43.2
Nn3g21641 Nelumbo nucifera HOM05D001397 ORTHO05D001300 6.0e-10 68.2 94 42.6
TAR362G0524 Trochodendron aralioides HOM05D001397 ORTHO05D001300 6.0e-10 68.2 96 43.8
PGR004G0959 Punica granatum HOM05D001397 ORTHO05D001300 7.9e-10 67.8 95 41.1
Sc13g0006310 Simmondsia chinensis HOM05D001397 ORTHO05D001300 7.9e-10 67.8 99 41.4
THA.LOC104821797 Tarenaya hassleriana HOM05D001397 ORTHO05D001300 1.0e-09 67.4 81 48.1
HanXRQChr17g0552091 Helianthus annuus HOM05D001397 ORTHO05D001300 2.3e-09 66.2 103 38.8
BcaNung00222 Brassica carinata HOM05D001397 ORTHO05D001300 3.0e-09 65.9 90 42.2
Ah.04g154890 Amaranthus hybridus HOM05D001397 ORTHO05D001300 3.9e-09 65.5 90 40.0
Dinv02078 Davidia involucrata HOM05D001397 ORTHO05D001300 3.9e-09 65.5 99 42.4
Peaxi162Scf00065g00324 Petunia axillaris HOM05D001397 ORTHO05D001300 3.9e-09 65.5 100 40.0
EL10Ac3g04923 Beta vulgaris HOM05D001397 ORTHO05D001300 5.1e-09 65.1 90 42.2
C01p26800 Brassica napus HOM05D001397 ORTHO05D001300 5.1e-09 65.1 90 43.3
BolC1t02624H Brassica oleracea HOM05D001397 ORTHO05D001300 5.1e-09 65.1 90 43.3
Eucgr.H04029 Eucalyptus grandis HOM05D001397 ORTHO05D001300 5.1e-09 65.1 103 39.8
BcaC09g50307 Brassica carinata HOM05D001397 ORTHO05D001300 6.7e-09 64.7 90 43.3
Manes.15G006500 Manihot esculenta HOM05D001397 ORTHO05D001300 6.7e-09 64.7 95 41.1
CARHR222450 Cardamine hirsuta HOM05D001397 ORTHO05D001300 8.7e-09 64.3 96 41.7
Hma1.2p1_0399F.1_g143980 Hydrangea macrophylla HOM05D001397 ORTHO05D001300 1.5e-08 63.5 115 40.0
CAN.G197.19 Capsicum annuum HOM05D001397 ORTHO05D001300 1.9e-08 63.2 99 42.4
AL7G39000 Arabidopsis lyrata HOM05D001397 ORTHO05D001300 2.5e-08 62.8 95 43.2
SalBow8G3812 Salvia bowleyana HOM05D001397 ORTHO05D001300 2.5e-08 62.8 95 41.1
BcaC06g33463 Brassica carinata HOM05D001397 ORTHO05D001300 3.3e-08 62.4 94 41.5
C07p47670 Brassica napus HOM05D000768 ORTHO05D000665 3.3e-08 62.4 94 41.5
Sp7g14630 Schrenkiella parvula HOM05D001397 ORTHO05D001300 3.3e-08 62.4 95 41.1
Aqoxy2G02798 Aquilegia oxysepala HOM05D001397 ORTHO05D001300 7.4e-08 61.2 94 41.5
BolC7t45292H Brassica oleracea HOM05D001397 ORTHO05D001300 7.4e-08 61.2 94 41.5
Thecc.04G295800 Theobroma cacao HOM05D001397 ORTHO05D001300 7.4e-08 61.2 100 40.0
Thhalv10025009m.g Eutrema salsugineum HOM05D001397 ORTHO05D001300 1.3e-07 60.5 95 38.9
AT4G16144 Arabidopsis thaliana HOM05D001397 ORTHO05D001300 1.6e-07 60.1 95 40.0
Aa31LG10G6000 Aethionema arabicum HOM05D001397 ORTHO05D001300 2.1e-07 59.7 98 37.8
AUR62016147 Chenopodium quinoa HOM05D001397 ORTHO05D001300 2.8e-07 59.3 90 40.0
BcaC06g32988 Brassica carinata HOM05D001397 ORTHO05D001300 3.7e-07 58.9 94 39.4
HPP92_017240 Vanilla planifolia HOM05D001397 ORTHO05D001300 3.7e-07 58.9 95 36.8
HPP92_027568 Vanilla planifolia HOM05D001397 ORTHO05D001300 3.7e-07 58.9 95 36.8
Carub.0007s2544 Capsella rubella HOM05D001397 ORTHO05D001300 4.8e-07 58.5 93 39.8
MELO3C021283.2 Cucumis melo HOM05D001397 ORTHO05D001300 4.8e-07 58.5 94 38.3
arahy.Tifrunner.gnm1.ann1.7EDN8J Arachis hypogaea HOM05D001397 ORTHO05D001300 6.2e-07 58.2 108 38.0
DCAR_030481 Daucus carota HOM05D001397 ORTHO05D001300 6.2e-07 58.2 109 34.9
SHI35734 Sapria himalayana HOM05D033944 ORTHO05D365304 6.2e-07 58.2 131 39.7
AUR62042949 Chenopodium quinoa HOM05D001397 ORTHO05D001300 8.1e-07 57.8 92 40.2
AUR62043576 Chenopodium quinoa HOM05D001397 ORTHO05D001300 8.1e-07 57.8 92 40.2
CsaV3_6G022530 Cucumis sativus L. HOM05D001397 ORTHO05D001300 1.8e-06 56.6 94 38.3
ECA246G1757 Erigeron canadensis HOM05D001397 ORTHO05D001300 2.4e-06 56.2 101 37.6
MBI16_g05564_MAGBIO Magnolia biondii HOM05D001397 ORTHO05D001300 2.4e-06 56.2 94 35.1
SEGI_09744 Sequoiadendron giganteum HOM05D001397 ORTHO05D001300 2.4e-06 56.2 97 36.1
ClCG06G004740 Citrullus lanatus HOM05D001397 ORTHO05D001300 3.1e-06 55.8 93 36.6
PSO017G3250 Papaver somniferum HOM05D001397 ORTHO05D001300 6.9e-06 54.7 100 33.0


User provided reference genes

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