Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI33154 Sapria himalayana HOM05D004146 ORTHO05D004843 7.5e-53 210.3 110 100.0
TWI14G0575 Tripterygium wilfordii HOM05D004146 ORTHO05D004843 2.8e-07 58.9 50 62.0
VMungo1383G1227 Vigna mungo HOM05D004146 ORTHO05D000001 3.6e-07 58.5 42 69.0
AL4G46770 Arabidopsis lyrata HOM05D004146 ORTHO05D004843 4.8e-07 58.2 50 60.0
AT2G47210 Arabidopsis thaliana HOM05D004146 ORTHO05D004843 4.8e-07 58.2 50 60.0
BcaB02g08794 Brassica carinata HOM05D004146 ORTHO05D004843 4.8e-07 58.2 50 60.0
BcaB06g29458 Brassica carinata HOM05D004146 ORTHO05D004843 4.8e-07 58.2 50 60.0
BcaC02g06965 Brassica carinata HOM05D004146 ORTHO05D004843 4.8e-07 58.2 50 60.0
BcaC02g12586 Brassica carinata HOM05D004146 ORTHO05D004843 4.8e-07 58.2 50 60.0
A04p34860 Brassica napus HOM05D004146 ORTHO05D004843 4.8e-07 58.2 50 60.0
A05p00620 Brassica napus HOM05D004146 ORTHO05D004843 4.8e-07 58.2 50 60.0
C04p00700 Brassica napus HOM05D004146 ORTHO05D004843 4.8e-07 58.2 50 60.0
C04p72630 Brassica napus HOM05D004146 ORTHO05D004843 4.8e-07 58.2 50 60.0
BolC4t21705H Brassica oleracea HOM05D004146 ORTHO05D004843 4.8e-07 58.2 50 60.0
BraA05t19061Z Brassica rapa HOM05D004146 ORTHO05D004843 4.8e-07 58.2 50 60.0
BraSC79t46677Z Brassica rapa HOM05D004146 ORTHO05D004843 4.8e-07 58.2 50 60.0
Carub.0004s2994 Capsella rubella HOM05D004146 ORTHO05D004843 4.8e-07 58.2 50 60.0
Carub.0004s2995 Capsella rubella HOM05D004146 ORTHO05D004843 4.8e-07 58.2 50 60.0
CARHR142600 Cardamine hirsuta HOM05D004146 ORTHO05D004843 4.8e-07 58.2 50 60.0
Thhalv10001452m.g Eutrema salsugineum HOM05D004146 ORTHO05D004843 4.8e-07 58.2 50 60.0
Sp4g29200 Schrenkiella parvula HOM05D004146 ORTHO05D004843 4.8e-07 58.2 50 60.0
TPR.G4037 Trifolium pratense HOM05D004146 ORTHO05D004843 4.8e-07 58.2 50 62.0
VMungo1383G2606 Vigna mungo HOM05D004146 ORTHO05D004843 4.8e-07 58.2 50 62.0
Phvul.001G214900 Phaseolus vulgaris HOM05D004146 ORTHO05D004843 6.2e-07 57.8 47 63.8
Glyma.19G218500 Glycine max HOM05D004146 ORTHO05D004843 1.1e-06 57.0 50 60.0
Medtr7g109870 Medicago truncatula HOM05D004146 ORTHO05D004843 1.1e-06 57.0 50 60.0
TWI23G0480 Tripterygium wilfordii HOM05D004146 ORTHO05D004843 1.1e-06 57.0 50 60.0
arahy.Tifrunner.gnm1.ann1.E9GQEB Arachis hypogaea HOM05D004146 ORTHO05D004843 1.4e-06 56.6 50 60.0
THA.LOC104802140 Tarenaya hassleriana HOM05D004146 ORTHO05D004843 1.4e-06 56.6 47 61.7
Atru.chr5.940 Acer truncatum HOM05D004146 ORTHO05D004843 1.8e-06 56.2 50 60.0
CAN.G293.4 Capsicum annuum HOM05D004146 ORTHO05D004843 1.8e-06 56.2 50 60.0
Cpa.g.sc18.100 Carica papaya HOM05D004146 ORTHO05D004843 1.8e-06 56.2 50 60.0
Ca_10265_v3 Cicer arietinum L. HOM05D004146 ORTHO05D004843 1.8e-06 56.2 47 57.4
Duzib211G0650 Durio zibethinus HOM05D004146 ORTHO05D004843 1.8e-06 56.2 50 60.0
Gohir.A08G120400 Gossypium hirsutum HOM05D004146 ORTHO05D004843 1.8e-06 56.2 50 60.0
Gohir.D08G141300 Gossypium hirsutum HOM05D004146 ORTHO05D004843 1.8e-06 56.2 50 60.0
Gorai.004G145300 Gossypium raimondii HOM05D004146 ORTHO05D004843 1.8e-06 56.2 50 60.0
Nitab4.5_0000222g0120 Nicotiana tabacum HOM05D004146 ORTHO05D004843 1.8e-06 56.2 50 60.0
Peaxi162Scf00770g00128 Petunia axillaris HOM05D004146 ORTHO05D004843 1.8e-06 56.2 50 60.0
GSVIVG01028167001 Vitis vinifera HOM05D004146 ORTHO05D004843 1.8e-06 56.2 50 60.0
Ca_09227_v3 Cicer arietinum L. HOM05D004146 ORTHO05D004843 2.4e-06 55.8 50 58.0
Psat3g019080 Pisum sativum HOM05D004146 ORTHO05D004843 2.4e-06 55.8 50 58.0
Potri.014G117400 Populus trichocarpa HOM05D004146 ORTHO05D004843 2.4e-06 55.8 50 58.0
BolC4t28751H Brassica oleracea HOM05D004146 ORTHO05D004843 3.1e-06 55.5 50 58.0
Duzib211G0108 Durio zibethinus HOM05D004146 ORTHO05D004843 3.1e-06 55.5 50 60.0
Manes.05G012300 Manihot esculenta HOM05D004146 ORTHO05D004843 3.1e-06 55.5 50 60.0
Hund09662 Selenicereus undatus HOM05D004146 ORTHO05D004843 3.1e-06 55.5 47 59.6
TPR.G38442 Trifolium pratense HOM05D004146 ORTHO05D004843 3.1e-06 55.5 50 58.0
Actinidia17925 Actinidia chinensis HOM05D004146 ORTHO05D004843 4.0e-06 55.1 47 59.6
arahy.Tifrunner.gnm1.ann1.BI9FA3 Arachis hypogaea HOM05D004146 ORTHO05D004843 4.0e-06 55.1 50 58.0
Lj5g0012537 Lotus japonicus HOM05D004146 ORTHO05D004843 4.0e-06 55.1 50 58.0
Lalb_Chr06g0167021 Lupinus albus HOM05D004146 ORTHO05D004843 4.0e-06 55.1 47 59.6
Lalb_Chr18g0046551 Lupinus albus HOM05D004146 ORTHO05D004843 4.0e-06 55.1 50 60.0
Nitab4.5_0010752g0020 Nicotiana tabacum HOM05D004146 ORTHO05D004843 4.0e-06 55.1 50 58.0
Sabra14G0087100 Salix brachista HOM05D004146 ORTHO05D004843 4.0e-06 55.1 50 56.0
COL.COLO4_23187 Corchorus olitorius HOM05D004146 ORTHO05D004843 5.3e-06 54.7 50 58.0
Migut.D00054 Erythranthe guttata HOM05D004146 ORTHO05D004843 5.3e-06 54.7 47 59.6
Lalb_Chr04g0260041 Lupinus albus HOM05D004146 ORTHO05D004843 5.3e-06 54.7 50 60.0
Solyc01g079210.3 Solanum lycopersicum HOM05D004146 ORTHO05D004843 5.3e-06 54.7 50 58.0
Sopen01g030990 Solanum pennellii HOM05D004146 ORTHO05D004843 5.3e-06 54.7 50 58.0
PGSC0003DMG400009054 Solanum tuberosum HOM05D004146 ORTHO05D004843 5.3e-06 54.7 50 58.0
SGA_v2.0_scaffold376G50305 Striga asiatica HOM05D004146 ORTHO05D004843 5.3e-06 54.7 47 59.6
TPR.G31750 Trifolium pratense HOM05D004146 ORTHO05D004843 5.3e-06 54.7 47 57.4
MSTRG.21711 Avicennia marina HOM05D004146 ORTHO05D004843 6.9e-06 54.3 47 61.7
Haze_05083 Corylus avellana HOM05D004146 ORTHO05D004843 6.9e-06 54.3 48 58.3
Sc24g0004180 Simmondsia chinensis HOM05D004146 ORTHO05D004843 6.9e-06 54.3 49 57.1
EL10As5g23605 Beta vulgaris HOM05D004146 ORTHO05D004843 9.0e-06 53.9 47 59.6
Glyma.03G221500 Glycine max HOM05D004146 ORTHO05D004843 9.0e-06 53.9 48 58.3
Hma1.2p1_0965F.1_g242130 Hydrangea macrophylla HOM05D004146 ORTHO05D004843 9.0e-06 53.9 51 52.9


User provided reference genes

Program Settings