Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI32634 Sapria himalayana HOM05D003395 ORTHO05D004087 1.7e-64 249.2 125 100.0
SHI33206 Sapria himalayana HOM05D003395 ORTHO05D004087 4.8e-40 167.9 117 77.8
SHI10456 Sapria himalayana HOM05D003395 ORTHO05D004087 4.7e-35 151.4 156 57.7
SHI34713 Sapria himalayana HOM05D003395 ORTHO05D004087 4.9e-32 141.4 128 61.7
Haze_19814 Corylus avellana HOM05D003395 ORTHO05D004087 3.1e-31 138.7 139 56.1
Haze_19811 Corylus avellana HOM05D003395 ORTHO05D004087 4.1e-31 138.3 139 56.1
CSS0000776 Camellia sinensis var. sinensis HOM05D003395 ORTHO05D004087 9.2e-31 137.1 139 55.4
CsaV3_3G040740 Cucumis sativus L. HOM05D003395 ORTHO05D004087 2.0e-30 136.0 139 56.1
Potri.015G026200 Populus trichocarpa HOM05D003395 ORTHO05D004087 3.5e-30 135.2 139 54.7
Haze_09905 Corylus avellana HOM05D003395 ORTHO05D004087 4.5e-30 134.8 139 54.7
MELO3C009808.2 Cucumis melo HOM05D003395 ORTHO05D004087 4.5e-30 134.8 139 55.4
ClCG10G015680 Citrullus lanatus HOM05D003395 ORTHO05D004087 5.9e-30 134.4 139 55.4
Manes.11G065000 Manihot esculenta HOM05D003395 ORTHO05D004087 5.9e-30 134.4 139 54.7
MD12G1080600 Malus domestica HOM05D003395 ORTHO05D004087 7.8e-30 134.0 139 54.7
Sed0021456 Sechium edule HOM05D003395 ORTHO05D004087 1.0e-29 133.7 139 55.4
MD14G1076700 Malus domestica HOM05D003395 ORTHO05D004087 1.3e-29 133.3 138 53.6
TAR633G2151 Trochodendron aralioides HOM05D003395 ORTHO05D004087 1.3e-29 133.3 139 54.0
Lj3g0013293 Lotus japonicus HOM05D003395 ORTHO05D004087 2.3e-29 132.5 139 54.7
Gorai.007G357300 Gossypium raimondii HOM05D003395 ORTHO05D004087 2.9e-29 132.1 139 54.7
RcHm_v2.0_Chr3g0483381 Rosa chinensis HOM05D003395 ORTHO05D004087 2.9e-29 132.1 139 55.4
COL.COLO4_22300 Corchorus olitorius HOM05D003395 ORTHO05D004087 3.8e-29 131.7 139 54.0
Gohir.D11G326700 Gossypium hirsutum HOM05D003395 ORTHO05D004087 3.8e-29 131.7 139 54.0
Ah.13g076590 Amaranthus hybridus HOM05D003395 ORTHO05D004087 6.6e-29 131.0 139 53.2
arahy.Tifrunner.gnm1.ann1.13YWQX Arachis hypogaea HOM05D003395 ORTHO05D004087 6.6e-29 131.0 139 53.2
arahy.Tifrunner.gnm1.ann1.C8DH2G Arachis hypogaea HOM05D003395 ORTHO05D004087 6.6e-29 131.0 139 53.2
Cc06_g17870 Coffea canephora HOM05D003395 ORTHO05D004087 6.6e-29 131.0 139 53.2
QL07p003024 Quercus lobata HOM05D003395 ORTHO05D004087 6.6e-29 131.0 137 54.7
Atru.chr1.1149 Acer truncatum HOM05D003395 ORTHO05D004087 8.6e-29 130.6 139 54.0
GSVIVG01033240001 Vitis vinifera HOM05D003395 ORTHO05D004087 8.6e-29 130.6 137 54.0
AUR62026086 Chenopodium quinoa HOM05D003395 ORTHO05D004087 1.1e-28 130.2 139 51.1
Glyma.15G010000 Glycine max HOM05D003395 ORTHO05D004087 1.1e-28 130.2 139 54.0
Nn7g36372 Nelumbo nucifera HOM05D003395 ORTHO05D004087 1.5e-28 129.8 138 52.2
TPR.G37242 Trifolium pratense HOM05D003395 ORTHO05D004087 1.5e-28 129.8 139 54.0
Ca_01074_v3 Cicer arietinum L. HOM05D003395 ORTHO05D004087 1.9e-28 129.4 139 53.2
Glyma.13G363900 Glycine max HOM05D003395 ORTHO05D004087 1.9e-28 129.4 139 54.0
Psat5g301400 Pisum sativum HOM05D003395 ORTHO05D004087 1.9e-28 129.4 139 54.0
CiPaw.09G039800 Carya illinoinensis HOM05D003395 ORTHO05D004087 2.5e-28 129.0 139 51.8
Lalb_Chr24g0395581 Lupinus albus HOM05D003395 ORTHO05D004087 2.5e-28 129.0 139 53.2
Medtr2g103370 Medicago truncatula HOM05D003395 ORTHO05D004087 2.5e-28 129.0 139 54.0
Rhsim04G0105700 Rhododendron simsii HOM05D003395 ORTHO05D004087 2.5e-28 129.0 139 53.2
Duzib128G1779 Durio zibethinus HOM05D003395 ORTHO05D004087 3.3e-28 128.6 139 52.5
FvH4_6g24390 Fragaria vesca HOM05D003395 ORTHO05D004087 3.3e-28 128.6 139 52.5
FAN05G3635 Fragaria x ananassa HOM05D003395 ORTHO05D004087 3.3e-28 128.6 139 52.5
FAN09G3838 Fragaria x ananassa HOM05D003395 ORTHO05D004087 3.3e-28 128.6 139 52.5
Lj1A1128G63 Lonicera japonica HOM05D003395 ORTHO05D004087 3.3e-28 128.6 139 51.1
Dinv39652 Davidia involucrata HOM05D003395 ORTHO05D004087 4.3e-28 128.3 139 53.2
CANSAT80G2433 Cannabis sativa HOM05D003395 ORTHO05D004087 5.6e-28 127.9 139 51.1
Sabra12G0023800 Salix brachista HOM05D003395 ORTHO05D004087 5.6e-28 127.9 139 54.0
THA.LOC104817509 Tarenaya hassleriana HOM05D003395 ORTHO05D004087 5.6e-28 127.9 139 52.5
Thecc.05G151200 Theobroma cacao HOM05D003395 ORTHO05D004087 5.6e-28 127.9 139 54.7
vmacro09059 Vaccinium macrocarpon HOM05D003395 ORTHO05D004087 7.3e-28 127.5 139 53.2
EL10Ac3g07130 Beta vulgaris HOM05D003395 ORTHO05D004087 9.5e-28 127.1 139 51.1
Lj1A1126G58 Lonicera japonica HOM05D003395 ORTHO05D004087 9.5e-28 127.1 139 50.4
TWI74G0608 Tripterygium wilfordii HOM05D003395 ORTHO05D004087 9.5e-28 127.1 139 52.5
FAN02G0096 Fragaria x ananassa HOM05D003395 ORTHO05D004087 1.2e-27 126.7 139 51.8
CARHR136710 Cardamine hirsuta HOM05D003395 ORTHO05D004087 2.1e-27 125.9 139 50.4
MBI13_g36804_MAGBIO Magnolia biondii HOM05D003395 ORTHO05D004087 2.1e-27 125.9 137 51.1
Carub.0004s2387 Capsella rubella HOM05D003395 ORTHO05D004087 2.8e-27 125.6 139 50.4
Potri.012G034800 Populus trichocarpa HOM05D003395 ORTHO05D004087 2.8e-27 125.6 139 53.2
Eucgr.K02007 Eucalyptus grandis HOM05D003395 ORTHO05D004087 3.6e-27 125.2 139 51.1
Thhalv10016231m.g Eutrema salsugineum HOM05D003395 ORTHO05D004087 3.6e-27 125.2 139 50.4
Ciclev10004294m.g Citrus clementina HOM05D003395 ORTHO05D004087 8.0e-27 124.0 139 51.1
BcaB06g29192 Brassica carinata HOM05D003395 ORTHO05D004087 1.0e-26 123.6 139 49.6
BcaC02g07302 Brassica carinata HOM05D003395 ORTHO05D004087 1.0e-26 123.6 139 49.6
C04p69140 Brassica napus HOM05D003395 ORTHO05D004087 1.0e-26 123.6 139 49.6
BolC4t28411H Brassica oleracea HOM05D003395 ORTHO05D004087 1.0e-26 123.6 139 49.6
BraA04t18629Z Brassica rapa HOM05D003395 ORTHO05D004087 1.0e-26 123.6 139 49.6
Phvul.005G175500 Phaseolus vulgaris HOM05D003395 ORTHO05D004087 1.0e-26 123.6 139 51.8
A04p31720 Brassica napus HOM05D003395 ORTHO05D004087 1.4e-26 123.2 139 49.6
FAN14G3261 Fragaria x ananassa HOM05D003395 ORTHO05D004087 1.4e-26 123.2 124 56.5
Nitab4.5_0006870g0040 Nicotiana tabacum HOM05D003395 ORTHO05D004087 1.8e-26 122.9 139 50.4
Peaxi162Scf00130g00723 Petunia axillaris HOM05D003395 ORTHO05D004087 1.8e-26 122.9 139 50.4
CAN.G676.13 Capsicum annuum HOM05D003395 ORTHO05D004087 2.3e-26 122.5 139 50.4
Solyc04g016240.3 Solanum lycopersicum HOM05D003395 ORTHO05D004087 2.3e-26 122.5 139 50.4
Sopen04g008350 Solanum pennellii HOM05D003395 ORTHO05D004087 2.3e-26 122.5 139 50.4
VMungo1080G0039 Vigna mungo HOM05D003395 ORTHO05D004087 2.3e-26 122.5 139 51.1
ECA236G0559 Erigeron canadensis HOM05D003395 ORTHO05D004087 3.0e-26 122.1 139 49.6
SalBow1G6094 Salvia bowleyana HOM05D003395 ORTHO05D004087 3.0e-26 122.1 139 50.4
ATR0320G031 Amborella trichopoda HOM05D003395 ORTHO05D004087 4.0e-26 121.7 139 49.6
AL4G39710 Arabidopsis lyrata HOM05D003395 ORTHO05D004087 4.0e-26 121.7 139 48.9
Eucgr.K01765 Eucalyptus grandis HOM05D003395 ORTHO05D004087 4.0e-26 121.7 139 50.4
Lj3g0025487 Lotus japonicus HOM05D003395 ORTHO05D004087 4.0e-26 121.7 137 52.6
Nitab4.5_0000826g0280 Nicotiana tabacum HOM05D003395 ORTHO05D004087 4.0e-26 121.7 139 49.6
Sp4g23860 Schrenkiella parvula HOM05D003395 ORTHO05D004087 4.0e-26 121.7 139 48.9
Oeu008171.1 Olea europaea HOM05D003395 ORTHO05D004087 5.2e-26 121.3 138 50.7
SalBow6G3234 Salvia bowleyana HOM05D003395 ORTHO05D004087 5.2e-26 121.3 139 49.6
AT2G41620 Arabidopsis thaliana HOM05D003395 ORTHO05D004087 6.8e-26 120.9 139 48.2
Sc19g0006620 Simmondsia chinensis HOM05D003395 ORTHO05D004087 8.9e-26 120.6 139 49.6
Sabra15G0019300 Salix brachista HOM05D003395 ORTHO05D004087 1.5e-25 119.8 139 49.6
Sabra15G0021800 Salix brachista HOM05D003395 ORTHO05D004087 1.5e-25 119.8 139 49.6
Aa31LG1G23630 Aethionema arabicum HOM05D003395 ORTHO05D004087 2.0e-25 119.4 139 48.2
HPP92_001326 Vanilla planifolia HOM05D003395 ORTHO05D004087 2.0e-25 119.4 139 46.0
Migut.K00101 Erythranthe guttata HOM05D003395 ORTHO05D004087 3.4e-25 118.6 139 49.6
BcaC07g40053 Brassica carinata HOM05D003395 ORTHO05D004087 9.8e-25 117.1 139 47.5
C08p32740 Brassica napus HOM05D003395 ORTHO05D004087 9.8e-25 117.1 139 47.5
BolC8t50885H Brassica oleracea HOM05D003395 ORTHO05D004087 9.8e-25 117.1 139 47.5
HanXRQChr04g0125091 Helianthus annuus HOM05D003395 ORTHO05D004087 9.8e-25 117.1 139 50.4
DCAR_020506 Daucus carota HOM05D003395 ORTHO05D004087 1.7e-24 116.3 139 51.1
PSO210G1603 Papaver somniferum HOM05D003395 ORTHO05D004087 1.7e-24 116.3 137 46.7
Aqoxy2G00226 Aquilegia oxysepala HOM05D003395 ORTHO05D004087 2.2e-24 115.9 139 48.2
A09p50250 Brassica napus HOM05D003395 ORTHO05D004087 2.9e-24 115.5 139 46.8
BraA09t40475Z Brassica rapa HOM05D003395 ORTHO05D004087 2.9e-24 115.5 139 46.8
Lsat_1_v5_gn_8_82001 Lactuca sativa HOM05D003395 ORTHO05D004087 2.9e-24 115.5 139 49.6
SHI27325 Sapria himalayana HOM05D003395 ORTHO05D004087 2.9e-24 115.5 124 54.8
MSTRG.26130 Avicennia marina HOM05D003395 ORTHO05D004087 3.7e-24 115.2 139 47.5
Os03g0349000 Oryza sativa ssp. japonica HOM05D003395 ORTHO05D004087 4.9e-24 114.8 139 47.5
Thhalv10005836m.g Eutrema salsugineum HOM05D003395 ORTHO05D004087 8.3e-24 114.0 124 50.0
Lalb_Chr14g0373701 Lupinus albus HOM05D003395 ORTHO05D004087 1.4e-23 113.2 139 48.2
AL5G38890 Arabidopsis lyrata HOM05D003395 ORTHO05D004087 1.9e-23 112.8 139 46.8
AT3G57350 Arabidopsis thaliana HOM05D003395 ORTHO05D004087 2.4e-23 112.5 139 46.8
Carub.0005s2420 Capsella rubella HOM05D003395 ORTHO05D004087 2.4e-23 112.5 139 46.0
unitig_22.g5792 Utricularia gibba HOM05D003395 ORTHO05D004087 3.2e-23 112.1 138 47.1
Sp5g05250 Schrenkiella parvula HOM05D003395 ORTHO05D004087 4.1e-23 111.7 139 46.0
Zm00001eb016760 Zea mays HOM05D003395 ORTHO05D004087 4.1e-23 111.7 139 43.9
CAN.G624.32 Capsicum annuum HOM05D003395 ORTHO05D004087 7.0e-23 110.9 133 48.9
PSO210G2967 Papaver somniferum HOM05D003395 ORTHO05D004087 7.0e-23 110.9 137 46.0
Hma1.2p1_0556F.1_g178050 Hydrangea macrophylla HOM05D003395 ORTHO05D004087 9.2e-23 110.5 167 44.3
SMO203G0013 Selaginella moellendorffii HOM05D003395 ORTHO05D004087 6.6e-21 104.4 137 46.7
SEGI_19146 Sequoiadendron giganteum HOM05D003395 ORTHO05D004087 1.5e-20 103.2 139 41.7
Pp3c6_19740 Physcomitrium patens HOM05D003395 ORTHO05D004087 7.3e-20 100.9 139 41.7
SHI25400 Sapria himalayana HOM05D003395 ORTHO05D004087 2.8e-19 99.0 139 46.0
SHI17502 Sapria himalayana HOM05D003395 ORTHO05D004087 3.6e-19 98.6 63 77.8
SHI37781 Sapria himalayana HOM05D003395 ORTHO05D004087 1.1e-18 97.1 63 79.4
AagrBONN_evm.TU.Sc2ySwM_117.1001 Anthoceros agrestis HOM05D003395 ORTHO05D004087 1.8e-18 96.3 139 41.0
SHI34459 Sapria himalayana HOM05D003395 ORTHO05D004087 6.8e-18 94.4 99 54.5
MBI13_g36815_MAGBIO Magnolia biondii HOM05D003395 ORTHO05D004087 4.4e-17 91.7 137 44.5
Mapoly0069s0022 Marchantia polymorpha HOM05D003395 ORTHO05D004087 4.9e-16 88.2 139 38.1
Prupe.7G054800 Prunus persica HOM05D003395 ORTHO05D004087 3.5e-14 82.0 96 50.0
AL4G39910 Arabidopsis lyrata HOM05D003395 ORTHO05D004087 3.9e-13 78.6 104 45.2
Gohir.A11G309900 Gossypium hirsutum HOM05D003395 ORTHO05D004087 5.1e-13 78.2 69 58.0
CDE11G0192 Ceratophyllum demersum HOM05D003395 ORTHO05D004087 1.9e-12 76.3 70 55.7
Eucgr.K01721 Eucalyptus grandis HOM05D003395 ORTHO05D004087 4.3e-12 75.1 63 58.7
SHI20623 Sapria himalayana HOM05D003395 ORTHO05D004087 5.6e-12 74.7 76 59.2
PGSC0003DMG402030272 Solanum tuberosum HOM05D003395 ORTHO05D004087 5.6e-12 74.7 126 38.9
CARHR167540 Cardamine hirsuta HOM05D003395 ORTHO05D004087 2.1e-11 72.8 63 54.0
PGSC0003DMG400012709 Solanum tuberosum HOM05D003395 ORTHO05D004087 2.1e-11 72.8 97 42.3
SHI37552 Sapria himalayana HOM05D003395 ORTHO05D004087 3.6e-11 72.0 41 90.2
RcHm_v2.0_Chr2g0152371 Rosa chinensis HOM05D003395 ORTHO05D004087 1.4e-10 70.1 101 42.6
SGA_v2.0_scaffold94G28494 Striga asiatica HOM05D003395 ORTHO05D004087 2.3e-10 69.3 63 54.0
Cpa.g.sc182.8 Carica papaya HOM05D003395 ORTHO05D004087 3.1e-10 68.9 54 66.7
SHI34448 Sapria himalayana HOM05D003395 ORTHO05D004087 3.4e-09 65.5 38 84.2
SHI48926 Sapria himalayana HOM05D003395 ORTHO05D004087 4.4e-09 65.1 35 91.4
Oeu023127.1 Olea europaea HOM05D003395 ORTHO05D004087 5.8e-09 64.7 67 49.3
AUR62024500 Chenopodium quinoa HOM05D003395 ORTHO05D004087 9.9e-09 63.9 124 37.1
SHI51863 Sapria himalayana HOM05D003395 ORTHO05D004087 9.9e-09 63.9 35 88.6
SHI40121 Sapria himalayana HOM05D003395 ORTHO05D004087 1.3e-08 63.5 61 60.7
SHI44367 Sapria himalayana HOM05D003395 ORTHO05D004087 2.2e-08 62.8 35 85.7
SHI45533 Sapria himalayana HOM05D003395 ORTHO05D004087 2.2e-08 62.8 35 85.7
SHI43596 Sapria himalayana HOM05D003395 ORTHO05D004087 3.7e-08 62.0 35 88.6
Eucgr.K01999 Eucalyptus grandis HOM05D003395 ORTHO05D004087 7.1e-07 57.8 67 47.8
SHI28043 Sapria himalayana HOM05D003395 ORTHO05D004087 2.1e-06 56.2 87 41.4
CBR_g4043 Chara braunii HOM05D003395 ORTHO05D004087 2.7e-06 55.8 130 31.5


User provided reference genes

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