Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI32287 Sapria himalayana HOM05D003395 ORTHO05D004087 2.2e-85 318.9 160 100.0
SHI34713 Sapria himalayana HOM05D003395 ORTHO05D004087 1.4e-39 166.8 192 53.6
SHI10456 Sapria himalayana HOM05D003395 ORTHO05D004087 3.4e-38 162.2 108 77.8
SHI34459 Sapria himalayana HOM05D003395 ORTHO05D004087 1.9e-36 156.4 142 63.4
SHI37781 Sapria himalayana HOM05D003395 ORTHO05D004087 5.6e-33 144.8 138 61.6
SHI20623 Sapria himalayana HOM05D003395 ORTHO05D004087 1.3e-32 143.7 220 45.0
SHI44367 Sapria himalayana HOM05D003395 ORTHO05D004087 2.0e-30 136.3 133 58.6
SHI45533 Sapria himalayana HOM05D003395 ORTHO05D004087 9.9e-30 134.0 133 57.9
SHI34448 Sapria himalayana HOM05D003395 ORTHO05D004087 2.1e-27 126.3 134 59.0
SHI28043 Sapria himalayana HOM05D003395 ORTHO05D004087 5.1e-26 121.7 91 67.0
CSS0000776 Camellia sinensis var. sinensis HOM05D003395 ORTHO05D004087 6.7e-26 121.3 108 56.5
Haze_09905 Corylus avellana HOM05D003395 ORTHO05D004087 1.9e-25 119.8 108 57.4
Haze_19811 Corylus avellana HOM05D003395 ORTHO05D004087 1.9e-25 119.8 108 58.3
Glyma.15G010000 Glycine max HOM05D003395 ORTHO05D004087 2.5e-25 119.4 206 38.8
CiPaw.09G039800 Carya illinoinensis HOM05D003395 ORTHO05D004087 3.3e-25 119.0 206 38.3
Haze_19814 Corylus avellana HOM05D003395 ORTHO05D004087 3.3e-25 119.0 120 55.8
Eucgr.K01721 Eucalyptus grandis HOM05D003395 ORTHO05D004087 3.3e-25 119.0 156 44.2
Psat5g301400 Pisum sativum HOM05D003395 ORTHO05D004087 4.3e-25 118.6 206 38.3
Manes.11G065000 Manihot esculenta HOM05D003395 ORTHO05D004087 1.6e-24 116.7 108 58.3
SHI27325 Sapria himalayana HOM05D003395 ORTHO05D004087 1.6e-24 116.7 98 62.2
Lj1A1126G58 Lonicera japonica HOM05D003395 ORTHO05D004087 3.7e-24 115.5 108 55.6
Lj1A1128G63 Lonicera japonica HOM05D003395 ORTHO05D004087 3.7e-24 115.5 108 55.6
ClCG10G015680 Citrullus lanatus HOM05D003395 ORTHO05D004087 4.8e-24 115.2 108 54.6
Potri.015G026200 Populus trichocarpa HOM05D003395 ORTHO05D004087 4.8e-24 115.2 108 58.3
Cpa.g.sc182.8 Carica papaya HOM05D003395 ORTHO05D004087 6.2e-24 114.8 108 56.5
Peaxi162Scf00130g00723 Petunia axillaris HOM05D003395 ORTHO05D004087 6.2e-24 114.8 109 56.0
Nn7g36372 Nelumbo nucifera HOM05D003395 ORTHO05D004087 8.1e-24 114.4 205 37.6
CANSAT80G2433 Cannabis sativa HOM05D003395 ORTHO05D004087 1.1e-23 114.0 108 56.5
CsaV3_3G040740 Cucumis sativus L. HOM05D003395 ORTHO05D004087 1.1e-23 114.0 108 54.6
Glyma.13G363900 Glycine max HOM05D003395 ORTHO05D004087 1.1e-23 114.0 206 37.4
MELO3C009808.2 Cucumis melo HOM05D003395 ORTHO05D004087 1.4e-23 113.6 108 53.7
Medtr2g103370 Medicago truncatula HOM05D003395 ORTHO05D004087 1.4e-23 113.6 108 55.6
Ca_01074_v3 Cicer arietinum L. HOM05D003395 ORTHO05D004087 1.8e-23 113.2 108 54.6
Eucgr.K02007 Eucalyptus grandis HOM05D003395 ORTHO05D004087 1.8e-23 113.2 206 36.9
Thecc.05G151200 Theobroma cacao HOM05D003395 ORTHO05D004087 1.8e-23 113.2 108 54.6
vmacro09059 Vaccinium macrocarpon HOM05D003395 ORTHO05D004087 1.8e-23 113.2 108 53.7
Duzib128G1779 Durio zibethinus HOM05D003395 ORTHO05D004087 2.4e-23 112.8 108 55.6
FAN14G3261 Fragaria x ananassa HOM05D003395 ORTHO05D004087 2.4e-23 112.8 186 40.3
Lalb_Chr14g0373701 Lupinus albus HOM05D003395 ORTHO05D004087 2.4e-23 112.8 206 35.9
Rhsim04G0105700 Rhododendron simsii HOM05D003395 ORTHO05D004087 2.4e-23 112.8 108 53.7
Sed0021456 Sechium edule HOM05D003395 ORTHO05D004087 2.4e-23 112.8 108 53.7
Gorai.007G357300 Gossypium raimondii HOM05D003395 ORTHO05D004087 3.1e-23 112.5 120 51.7
Sopen04g008350 Solanum pennellii HOM05D003395 ORTHO05D004087 3.1e-23 112.5 109 55.0
TWI74G0608 Tripterygium wilfordii HOM05D003395 ORTHO05D004087 3.1e-23 112.5 108 54.6
Dinv39652 Davidia involucrata HOM05D003395 ORTHO05D004087 4.0e-23 112.1 108 55.6
Hma1.2p1_0556F.1_g178050 Hydrangea macrophylla HOM05D003395 ORTHO05D004087 5.3e-23 111.7 109 56.9
QL07p003024 Quercus lobata HOM05D003395 ORTHO05D004087 5.3e-23 111.7 120 52.5
Gohir.A11G310000 Gossypium hirsutum HOM05D003395 ORTHO05D004087 6.9e-23 111.3 120 50.8
VMungo1080G0039 Vigna mungo HOM05D003395 ORTHO05D004087 6.9e-23 111.3 108 54.6
CAN.G676.13 Capsicum annuum HOM05D003395 ORTHO05D004087 9.0e-23 110.9 109 55.0
Sabra12G0023800 Salix brachista HOM05D003395 ORTHO05D004087 9.0e-23 110.9 120 53.3
Gohir.D11G326700 Gossypium hirsutum HOM05D003395 ORTHO05D004087 1.2e-22 110.5 120 50.8
Potri.012G034800 Populus trichocarpa HOM05D003395 ORTHO05D004087 1.2e-22 110.5 108 57.4
Nitab4.5_0006870g0040 Nicotiana tabacum HOM05D003395 ORTHO05D004087 1.5e-22 110.2 109 54.1
GSVIVG01033240001 Vitis vinifera HOM05D003395 ORTHO05D004087 1.5e-22 110.2 108 53.7
Ciclev10004294m.g Citrus clementina HOM05D003395 ORTHO05D004087 2.0e-22 109.8 120 50.8
Phvul.005G175500 Phaseolus vulgaris HOM05D003395 ORTHO05D004087 2.0e-22 109.8 108 53.7
Solyc04g016240.3 Solanum lycopersicum HOM05D003395 ORTHO05D004087 2.0e-22 109.8 109 53.2
Migut.K00101 Erythranthe guttata HOM05D003395 ORTHO05D004087 2.6e-22 109.4 108 53.7
TPR.G37242 Trifolium pratense HOM05D003395 ORTHO05D004087 2.6e-22 109.4 108 54.6
arahy.Tifrunner.gnm1.ann1.13YWQX Arachis hypogaea HOM05D003395 ORTHO05D004087 4.5e-22 108.6 120 50.0
arahy.Tifrunner.gnm1.ann1.C8DH2G Arachis hypogaea HOM05D003395 ORTHO05D004087 4.5e-22 108.6 120 50.0
Lalb_Chr24g0395581 Lupinus albus HOM05D003395 ORTHO05D004087 4.5e-22 108.6 108 51.9
MBI13_g36815_MAGBIO Magnolia biondii HOM05D003395 ORTHO05D004087 4.5e-22 108.6 199 39.2
ECA236G0559 Erigeron canadensis HOM05D003395 ORTHO05D004087 7.6e-22 107.8 108 53.7
TAR633G2151 Trochodendron aralioides HOM05D003395 ORTHO05D004087 1.3e-21 107.1 108 54.6
Lj3g0013293 Lotus japonicus HOM05D003395 ORTHO05D004087 2.9e-21 105.9 120 50.8
FvH4_6g24390 Fragaria vesca HOM05D003395 ORTHO05D004087 3.8e-21 105.5 108 52.8
Lsat_1_v5_gn_8_82001 Lactuca sativa HOM05D003395 ORTHO05D004087 3.8e-21 105.5 109 53.2
FAN09G3838 Fragaria x ananassa HOM05D003395 ORTHO05D004087 6.4e-21 104.8 108 51.9
MD14G1076700 Malus domestica HOM05D003395 ORTHO05D004087 6.4e-21 104.8 108 52.8
FAN05G3635 Fragaria x ananassa HOM05D003395 ORTHO05D004087 8.4e-21 104.4 108 52.8
Atru.chr1.1149 Acer truncatum HOM05D003395 ORTHO05D004087 1.1e-20 104.0 120 50.8
Aqoxy2G00226 Aquilegia oxysepala HOM05D003395 ORTHO05D004087 1.1e-20 104.0 118 50.0
SalBow1G6094 Salvia bowleyana HOM05D003395 ORTHO05D004087 1.1e-20 104.0 108 51.9
DCAR_020506 Daucus carota HOM05D003395 ORTHO05D004087 1.4e-20 103.6 108 51.9
RcHm_v2.0_Chr3g0483381 Rosa chinensis HOM05D003395 ORTHO05D004087 1.4e-20 103.6 106 51.9
Sc19g0006620 Simmondsia chinensis HOM05D003395 ORTHO05D004087 1.4e-20 103.6 108 51.9
ATR0320G031 Amborella trichopoda HOM05D003395 ORTHO05D004087 1.9e-20 103.2 106 50.9
FAN02G0096 Fragaria x ananassa HOM05D003395 ORTHO05D004087 1.9e-20 103.2 108 51.9
HanXRQChr04g0125091 Helianthus annuus HOM05D003395 ORTHO05D004087 1.9e-20 103.2 108 50.9
AL4G39710 Arabidopsis lyrata HOM05D003395 ORTHO05D004087 4.2e-20 102.1 109 48.6
AT2G41620 Arabidopsis thaliana HOM05D003395 ORTHO05D004087 4.2e-20 102.1 109 48.6
Nitab4.5_0000826g0280 Nicotiana tabacum HOM05D003395 ORTHO05D004087 4.2e-20 102.1 109 50.5
SalBow6G3234 Salvia bowleyana HOM05D003395 ORTHO05D004087 5.5e-20 101.7 108 50.9
Oeu008171.1 Olea europaea HOM05D003395 ORTHO05D004087 7.1e-20 101.3 116 48.3
Cc06_g17870 Coffea canephora HOM05D003395 ORTHO05D004087 9.3e-20 100.9 206 34.0
COL.COLO4_22300 Corchorus olitorius HOM05D003395 ORTHO05D004087 9.3e-20 100.9 108 50.9
MSTRG.26130 Avicennia marina HOM05D003395 ORTHO05D004087 1.2e-19 100.5 108 50.9
Sabra15G0019300 Salix brachista HOM05D003395 ORTHO05D004087 1.2e-19 100.5 118 50.8
Sabra15G0021800 Salix brachista HOM05D003395 ORTHO05D004087 1.2e-19 100.5 118 50.8
THA.LOC104817509 Tarenaya hassleriana HOM05D003395 ORTHO05D004087 1.2e-19 100.5 109 47.7
MD12G1080600 Malus domestica HOM05D003395 ORTHO05D004087 2.1e-19 99.8 108 52.8
Carub.0004s2387 Capsella rubella HOM05D003395 ORTHO05D004087 2.7e-19 99.4 109 46.8
BcaC07g40053 Brassica carinata HOM05D003395 ORTHO05D004087 3.5e-19 99.0 125 46.4
C08p32740 Brassica napus HOM05D003395 ORTHO05D004087 3.5e-19 99.0 125 46.4
BolC8t50885H Brassica oleracea HOM05D003395 ORTHO05D004087 3.5e-19 99.0 125 46.4
A09p50250 Brassica napus HOM05D003395 ORTHO05D004087 4.6e-19 98.6 125 46.4
BraA09t40475Z Brassica rapa HOM05D003395 ORTHO05D004087 4.6e-19 98.6 125 46.4
PSO210G1603 Papaver somniferum HOM05D003395 ORTHO05D004087 4.6e-19 98.6 104 51.0
PSO210G2967 Papaver somniferum HOM05D003395 ORTHO05D004087 4.6e-19 98.6 104 51.0
Sp5g05250 Schrenkiella parvula HOM05D003395 ORTHO05D004087 4.6e-19 98.6 109 47.7
BcaC02g07302 Brassica carinata HOM05D003395 ORTHO05D004087 6.0e-19 98.2 109 46.8
A04p31720 Brassica napus HOM05D003395 ORTHO05D004087 6.0e-19 98.2 109 46.8
C04p69140 Brassica napus HOM05D003395 ORTHO05D004087 6.0e-19 98.2 109 46.8
BolC4t28411H Brassica oleracea HOM05D003395 ORTHO05D004087 6.0e-19 98.2 109 46.8
BraA04t18629Z Brassica rapa HOM05D003395 ORTHO05D004087 6.0e-19 98.2 109 46.8
AUR62024500 Chenopodium quinoa HOM05D003395 ORTHO05D004087 7.9e-19 97.8 108 49.1
AUR62026086 Chenopodium quinoa HOM05D003395 ORTHO05D004087 7.9e-19 97.8 108 49.1
Thhalv10016231m.g Eutrema salsugineum HOM05D003395 ORTHO05D004087 7.9e-19 97.8 109 45.9
SHI40120 Sapria himalayana HOM05D003395 ORTHO05D004087 7.9e-19 97.8 74 70.3
Sp4g23860 Schrenkiella parvula HOM05D003395 ORTHO05D004087 1.3e-18 97.1 109 46.8
CARHR136710 Cardamine hirsuta HOM05D003395 ORTHO05D004087 1.8e-18 96.7 109 45.0
HPP92_001326 Vanilla planifolia HOM05D003395 ORTHO05D004087 1.8e-18 96.7 106 49.1
AT3G57350 Arabidopsis thaliana HOM05D003395 ORTHO05D004087 2.3e-18 96.3 109 45.9
EL10Ac3g07130 Beta vulgaris HOM05D003395 ORTHO05D004087 3.0e-18 95.9 108 48.1
BcaB06g29192 Brassica carinata HOM05D003395 ORTHO05D004087 3.0e-18 95.9 109 45.9
PGSC0003DMG400012709 Solanum tuberosum HOM05D003395 ORTHO05D004087 3.0e-18 95.9 194 35.1
Carub.0005s2420 Capsella rubella HOM05D003395 ORTHO05D004087 3.9e-18 95.5 109 45.0
SHI33206 Sapria himalayana HOM05D003395 ORTHO05D004087 5.1e-18 95.1 159 41.5
Ah.13g076590 Amaranthus hybridus HOM05D003395 ORTHO05D004087 8.7e-18 94.4 108 47.2
AL5G38890 Arabidopsis lyrata HOM05D003395 ORTHO05D004087 8.7e-18 94.4 109 45.0
unitig_22.g5792 Utricularia gibba HOM05D003395 ORTHO05D004087 1.5e-17 93.6 106 50.9
CDE11G0065 Ceratophyllum demersum HOM05D003395 ORTHO05D004087 1.9e-17 93.2 108 47.2
Os03g0349000 Oryza sativa ssp. japonica HOM05D003395 ORTHO05D004087 2.5e-17 92.8 106 48.1
Thhalv10005836m.g Eutrema salsugineum HOM05D003395 ORTHO05D004087 3.3e-17 92.4 109 43.1
Aa31LG1G23630 Aethionema arabicum HOM05D003395 ORTHO05D004087 5.6e-17 91.7 109 45.0
CAN.G624.32 Capsicum annuum HOM05D003395 ORTHO05D004087 2.8e-16 89.4 87 57.5
SHI37551 Sapria himalayana HOM05D003395 ORTHO05D004087 2.8e-16 89.4 74 67.6
SHI51863 Sapria himalayana HOM05D003395 ORTHO05D004087 2.4e-15 86.3 54 83.3
SEGI_19146 Sequoiadendron giganteum HOM05D003395 ORTHO05D004087 6.9e-15 84.7 106 44.3
SHI43596 Sapria himalayana HOM05D003395 ORTHO05D004087 3.4e-14 82.4 54 81.5
SHI25400 Sapria himalayana HOM05D003395 ORTHO05D004087 8.4e-13 77.8 109 45.0
Eucgr.K01765 Eucalyptus grandis HOM05D003395 ORTHO05D004087 1.1e-12 77.4 77 55.8
MBI13_g36804_MAGBIO Magnolia biondii HOM05D003395 ORTHO05D004087 1.3e-10 70.5 88 53.4
Pp3c6_19740 Physcomitrium patens HOM05D003395 ORTHO05D004087 6.7e-10 68.2 106 38.7
Mapoly0069s0022 Marchantia polymorpha HOM05D003395 ORTHO05D004087 3.3e-09 65.9 107 38.3
SMO203G0013 Selaginella moellendorffii HOM05D003395 ORTHO05D004087 6.9e-07 58.2 110 34.5


User provided reference genes

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