Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI32075 Sapria himalayana HOM05D000392 ORTHO05D002065 2.1e-70 268.9 132 100.0
Rhsim07G0041900 Rhododendron simsii HOM05D000002 ORTHO05D002065 1.3e-27 126.7 105 59.0
Rhsim01G0238600 Rhododendron simsii HOM05D000002 ORTHO05D002065 3.8e-27 125.2 105 58.1
Rhsim03G0114900 Rhododendron simsii HOM05D000002 ORTHO05D002065 6.5e-27 124.4 105 58.1
Sopen01g036580 Solanum pennellii HOM05D000002 ORTHO05D002065 8.8e-24 114.0 105 54.3
Sopen02g013820 Solanum pennellii HOM05D000002 ORTHO05D002065 8.8e-24 114.0 105 54.3
Sopen03g006780 Solanum pennellii HOM05D000002 ORTHO05D002065 8.8e-24 114.0 105 54.3
Sopen03g030560 Solanum pennellii HOM05D000002 ORTHO05D002065 8.8e-24 114.0 105 54.3
Sopen11g008810 Solanum pennellii HOM05D000002 ORTHO05D002065 8.8e-24 114.0 105 54.3
ECA233G3654 Erigeron canadensis HOM05D000392 ORTHO05D002065 1.5e-23 113.2 105 54.3
Sopen03g010500 Solanum pennellii HOM05D000002 ORTHO05D002065 1.5e-23 113.2 105 54.3
Sopen07g029130 Solanum pennellii HOM05D000002 ORTHO05D002065 2.6e-23 112.5 105 53.3
Sopen04g029040 Solanum pennellii HOM05D000002 ORTHO05D002065 3.3e-23 112.1 105 53.3
Sopen06g028770 Solanum pennellii HOM05D000002 ORTHO05D002065 3.3e-23 112.1 105 53.3
Sopen10g028630 Solanum pennellii HOM05D000002 ORTHO05D002065 3.3e-23 112.1 105 53.3
Sopen12g020570 Solanum pennellii HOM05D000002 ORTHO05D002065 3.3e-23 112.1 105 53.3
Sopen12g028980 Solanum pennellii HOM05D000002 ORTHO05D002065 3.3e-23 112.1 105 53.3
Sopen10g024560 Solanum pennellii HOM05D000002 ORTHO05D002065 9.7e-23 110.5 105 53.3
Sopen08g005170 Solanum pennellii HOM05D000002 ORTHO05D002065 6.3e-22 107.8 105 53.3
Sopen08g005930 Solanum pennellii HOM05D000002 ORTHO05D002065 8.2e-22 107.5 112 50.0
Sopen01g006130 Solanum pennellii HOM05D000002 ORTHO05D002065 2.4e-21 105.9 105 52.4
Sopen01g019060 Solanum pennellii HOM05D000002 ORTHO05D002065 2.4e-21 105.9 105 52.4
Sopen01g024170 Solanum pennellii HOM05D000002 ORTHO05D002065 2.4e-21 105.9 105 52.4
Sopen01g026840 Solanum pennellii HOM05D000002 ORTHO05D002065 2.4e-21 105.9 105 52.4
Sopen03g026840 Solanum pennellii HOM05D000002 ORTHO05D002065 2.4e-21 105.9 105 52.4
Sopen04g024530 Solanum pennellii HOM05D000002 ORTHO05D002065 2.4e-21 105.9 105 52.4
Sopen05g021470 Solanum pennellii HOM05D000002 ORTHO05D002065 2.4e-21 105.9 105 52.4
Sopen05g026510 Solanum pennellii HOM05D000002 ORTHO05D002065 2.4e-21 105.9 105 52.4
Sopen05g029240 Solanum pennellii HOM05D000392 ORTHO05D002065 2.4e-21 105.9 105 52.4
Sopen06g014830 Solanum pennellii HOM05D000002 ORTHO05D002065 2.4e-21 105.9 105 52.4
Sopen07g005570 Solanum pennellii HOM05D000002 ORTHO05D002065 2.4e-21 105.9 105 52.4
Sopen08g009910 Solanum pennellii HOM05D000002 ORTHO05D002065 2.4e-21 105.9 105 52.4
Sopen08g009950 Solanum pennellii HOM05D000002 ORTHO05D002065 2.4e-21 105.9 105 52.4
Sopen08g025440 Solanum pennellii HOM05D000002 ORTHO05D002065 2.4e-21 105.9 105 52.4
Sopen09g024720 Solanum pennellii HOM05D000392 ORTHO05D002065 2.4e-21 105.9 105 52.4
Sopen11g025130 Solanum pennellii HOM05D000002 ORTHO05D002065 2.4e-21 105.9 105 52.4
Sopen11g025450 Solanum pennellii HOM05D000002 ORTHO05D002065 2.4e-21 105.9 94 54.3
Sopen12g021410 Solanum pennellii HOM05D000002 ORTHO05D002065 2.4e-21 105.9 105 52.4
Sopen12g021690 Solanum pennellii HOM05D000002 ORTHO05D002065 2.4e-21 105.9 105 52.4
Sopen12g022710 Solanum pennellii HOM05D000002 ORTHO05D002065 2.4e-21 105.9 105 52.4
Sopen06g017280 Solanum pennellii HOM05D000002 ORTHO05D002065 3.1e-21 105.5 111 49.5
Sopen06g006170 Solanum pennellii HOM05D000002 ORTHO05D002065 4.1e-21 105.1 105 50.5
Atru.chr10.1217 Acer truncatum HOM05D000002 ORTHO05D002065 5.3e-21 104.8 111 45.0
ECA247G0139 Erigeron canadensis HOM05D000002 ORTHO05D002065 5.3e-21 104.8 100 52.0
RcHm_v2.0_Chr1g0323091 Rosa chinensis HOM05D000002 ORTHO05D002065 5.3e-21 104.8 105 48.6
Sopen05g028270 Solanum pennellii HOM05D000002 ORTHO05D002065 5.3e-21 104.8 105 51.4
Sopen02g016360 Solanum pennellii HOM05D000002 ORTHO05D002065 6.9e-21 104.4 105 51.4
Sopen04g007580 Solanum pennellii HOM05D000395 ORTHO05D002065 6.9e-21 104.4 105 52.4
Sopen04g012860 Solanum pennellii HOM05D000002 ORTHO05D002065 6.9e-21 104.4 105 52.4
Sopen06g012160 Solanum pennellii HOM05D000002 ORTHO05D002065 6.9e-21 104.4 105 51.4
Sopen11g010460 Solanum pennellii HOM05D000002 ORTHO05D002065 1.2e-20 103.6 104 51.9
Sopen06g015990 Solanum pennellii HOM05D000002 ORTHO05D002065 1.5e-20 103.2 105 51.4
Sopen11g024270 Solanum pennellii HOM05D000002 ORTHO05D002065 1.5e-20 103.2 105 51.4
HanXRQChr15g0481031 Helianthus annuus HOM05D000002 ORTHO05D002065 2.0e-20 102.8 100 48.0
RcHm_v2.0_Chr2g0148911 Rosa chinensis HOM05D000002 ORTHO05D002065 2.0e-20 102.8 105 47.6
Sopen11g017220 Solanum pennellii HOM05D000002 ORTHO05D002065 2.6e-20 102.4 111 47.7
Sopen11g021220 Solanum pennellii HOM05D000392 ORTHO05D000610 2.6e-20 102.4 105 51.4
Sopen01g005920 Solanum pennellii HOM05D000392 ORTHO05D002065 5.9e-20 101.3 100 52.0
Sopen02g003080 Solanum pennellii HOM05D000002 ORTHO05D002065 5.9e-20 101.3 100 52.0
Sopen02g017660 Solanum pennellii HOM05D000392 ORTHO05D002065 5.9e-20 101.3 100 52.0
Sopen02g030500 Solanum pennellii HOM05D000392 ORTHO05D002065 5.9e-20 101.3 100 52.0
Sopen03g036760 Solanum pennellii HOM05D000392 ORTHO05D002065 5.9e-20 101.3 100 52.0
Sopen04g018150 Solanum pennellii HOM05D000006 ORTHO05D002065 5.9e-20 101.3 100 52.0
Sopen04g023800 Solanum pennellii HOM05D000392 ORTHO05D002065 5.9e-20 101.3 100 52.0
Sopen04g025720 Solanum pennellii HOM05D000002 ORTHO05D002065 5.9e-20 101.3 100 52.0
Sopen04g026730 Solanum pennellii HOM05D000392 ORTHO05D002065 5.9e-20 101.3 100 52.0
Sopen05g001590 Solanum pennellii HOM05D000392 ORTHO05D000001 5.9e-20 101.3 100 52.0
Sopen05g006720 Solanum pennellii HOM05D000392 ORTHO05D002065 5.9e-20 101.3 100 52.0
Sopen05g025330 Solanum pennellii HOM05D000002 ORTHO05D002065 5.9e-20 101.3 100 52.0
Sopen06g003740 Solanum pennellii HOM05D000392 ORTHO05D002065 5.9e-20 101.3 100 52.0
Sopen06g019790 Solanum pennellii HOM05D000002 ORTHO05D002065 5.9e-20 101.3 100 52.0
Sopen06g020490 Solanum pennellii HOM05D000392 ORTHO05D002065 5.9e-20 101.3 100 52.0
Sopen06g021220 Solanum pennellii HOM05D000392 ORTHO05D002065 5.9e-20 101.3 100 52.0
Sopen06g025370 Solanum pennellii HOM05D000392 ORTHO05D002065 5.9e-20 101.3 100 52.0
Sopen06g029030 Solanum pennellii HOM05D000392 ORTHO05D002065 5.9e-20 101.3 100 52.0
Sopen07g020050 Solanum pennellii HOM05D000002 ORTHO05D002065 5.9e-20 101.3 100 52.0
Sopen07g022000 Solanum pennellii HOM05D000392 ORTHO05D002065 5.9e-20 101.3 100 52.0
Sopen07g028380 Solanum pennellii HOM05D000392 ORTHO05D002065 5.9e-20 101.3 100 52.0
Sopen07g032760 Solanum pennellii HOM05D000392 ORTHO05D002065 5.9e-20 101.3 100 52.0
Sopen07g033180 Solanum pennellii HOM05D000392 ORTHO05D002065 5.9e-20 101.3 100 52.0
Sopen08g029640 Solanum pennellii HOM05D000392 ORTHO05D002065 5.9e-20 101.3 100 52.0
Sopen09g007350 Solanum pennellii HOM05D000392 ORTHO05D002065 5.9e-20 101.3 100 52.0
Sopen09g007940 Solanum pennellii HOM05D000392 ORTHO05D002065 5.9e-20 101.3 100 52.0
Sopen09g010790 Solanum pennellii HOM05D000392 ORTHO05D002065 5.9e-20 101.3 100 52.0
Sopen09g015720 Solanum pennellii HOM05D000392 ORTHO05D002065 5.9e-20 101.3 100 52.0
Sopen09g027600 Solanum pennellii HOM05D000392 ORTHO05D002065 5.9e-20 101.3 100 52.0
Sopen09g031920 Solanum pennellii HOM05D000002 ORTHO05D002065 5.9e-20 101.3 100 52.0
Sopen10g010780 Solanum pennellii HOM05D000002 ORTHO05D002065 5.9e-20 101.3 100 52.0
Sopen10g021220 Solanum pennellii HOM05D000392 ORTHO05D002065 5.9e-20 101.3 100 52.0
Sopen11g010530 Solanum pennellii HOM05D000002 ORTHO05D002065 5.9e-20 101.3 100 52.0
Sopen11g026270 Solanum pennellii HOM05D000392 ORTHO05D002065 5.9e-20 101.3 100 52.0
Sopen12g020430 Solanum pennellii HOM05D000392 ORTHO05D002065 5.9e-20 101.3 100 52.0
Sopen12g023100 Solanum pennellii HOM05D000392 ORTHO05D002065 5.9e-20 101.3 100 52.0
Sopen04g006270 Solanum pennellii HOM05D000392 ORTHO05D000610 7.7e-20 100.9 100 51.0
RcHm_v2.0_Chr5g0012171 Rosa chinensis HOM05D000002 ORTHO05D002065 1.0e-19 100.5 105 45.7
RcHm_v2.0_Chr7g0185711 Rosa chinensis HOM05D000002 ORTHO05D002065 1.0e-19 100.5 105 46.7
Sopen07g024680 Solanum pennellii HOM05D000002 ORTHO05D002065 1.0e-19 100.5 105 50.5
Sopen08g008670 Solanum pennellii HOM05D000002 ORTHO05D002065 1.0e-19 100.5 100 51.0
Sopen09g029440 Solanum pennellii HOM05D000002 ORTHO05D002065 1.0e-19 100.5 105 50.5
Sopen02g010090 Solanum pennellii HOM05D000002 ORTHO05D002065 1.7e-19 99.8 100 51.0
Sopen09g030360 Solanum pennellii HOM05D000002 ORTHO05D002065 1.7e-19 99.8 98 51.0
FvH4_6g44542 Fragaria vesca HOM05D000002 ORTHO05D002065 2.2e-19 99.4 105 45.7
Sopen01g015900 Solanum pennellii HOM05D000002 ORTHO05D002065 2.2e-19 99.4 100 51.0
Sopen01g017650 Solanum pennellii HOM05D000002 ORTHO05D002065 2.2e-19 99.4 88 54.5
Sopen06g006920 Solanum pennellii HOM05D000002 ORTHO05D002065 2.2e-19 99.4 105 49.5
RcHm_v2.0_Chr2g0150891 Rosa chinensis HOM05D000002 ORTHO05D002065 3.8e-19 98.6 105 45.7
RcHm_v2.0_Chr2g0138291 Rosa chinensis HOM05D000002 ORTHO05D002065 5.0e-19 98.2 105 45.7
RcHm_v2.0_Chr7g0186831 Rosa chinensis HOM05D000002 ORTHO05D002065 5.0e-19 98.2 105 45.7
Sopen10g023800 Solanum pennellii HOM05D000002 ORTHO05D002065 5.0e-19 98.2 99 49.5
ECA240G3077 Erigeron canadensis HOM05D002958 ORTHO05D003558 6.5e-19 97.8 85 55.3
Sopen04g008860 Solanum pennellii HOM05D000002 ORTHO05D002065 6.5e-19 97.8 100 49.0
Sopen05g026210 Solanum pennellii HOM05D000002 ORTHO05D002065 6.5e-19 97.8 100 51.0
Sopen08g018170 Solanum pennellii HOM05D000002 ORTHO05D002065 8.5e-19 97.4 100 50.0
RcHm_v2.0_Chr1g0367381 Rosa chinensis HOM05D000002 ORTHO05D002065 1.9e-18 96.3 105 43.8
Sopen03g018110 Solanum pennellii HOM05D000002 ORTHO05D002065 1.9e-18 96.3 106 47.2
Sopen07g012530 Solanum pennellii HOM05D000002 ORTHO05D002065 4.2e-18 95.1 100 48.0
TPR.G40444 Trifolium pratense HOM05D000002 ORTHO05D002065 5.5e-18 94.7 106 47.2
Sopen03g019930 Solanum pennellii HOM05D000002 ORTHO05D002065 1.6e-17 93.2 105 47.6
Sopen11g016080 Solanum pennellii HOM05D000002 ORTHO05D002065 3.6e-17 92.0 95 49.5
FvH4_4g13933 Fragaria vesca HOM05D000002 ORTHO05D002065 8.0e-17 90.9 97 41.2
CAN.G1398.6 Capsicum annuum HOM05D001300 ORTHO05D004991 2.3e-16 89.4 105 45.7
Sopen02g022980 Solanum pennellii HOM05D000002 ORTHO05D002065 3.0e-16 89.0 100 47.0
Sopen06g018660 Solanum pennellii HOM05D000392 ORTHO05D002065 5.2e-16 88.2 70 62.9
PSO478G0776 Papaver somniferum HOM05D000002 ORTHO05D002065 8.8e-16 87.4 100 42.0
Sopen04g013080 Solanum pennellii HOM05D000002 ORTHO05D002065 1.1e-15 87.0 70 62.9
RcHm_v2.0_Chr3g0491271 Rosa chinensis HOM05D000002 ORTHO05D002065 4.4e-15 85.1 105 41.0
PSO675G0833 Papaver somniferum HOM05D000003 ORTHO05D000004 5.7e-15 84.7 105 40.0
ClCG05G011950 Citrullus lanatus HOM05D000337 ORTHO05D000297 7.4e-15 84.3 84 50.0
SHI24468 Sapria himalayana HOM05D000392 ORTHO05D002065 9.7e-15 84.0 100 42.0
Atru.chr6.2292 Acer truncatum HOM05D000002 ORTHO05D002065 1.3e-14 83.6 86 44.2
Thhalv10011182m.g Eutrema salsugineum HOM05D003502 ORTHO05D004250 2.2e-14 82.8 85 48.2
CAN.G1166.13 Capsicum annuum HOM05D003532 ORTHO05D003298 3.7e-14 82.0 104 42.3
SHI13561 Sapria himalayana HOM05D000014 ORTHO05D002065 3.7e-14 82.0 95 45.3
Sopen12g008380 Solanum pennellii HOM05D000002 ORTHO05D002065 2.4e-13 79.3 70 54.3
SHI00385 Sapria himalayana HOM05D000392 ORTHO05D002065 4.1e-13 78.6 85 49.4
Atru.chr7.457 Acer truncatum HOM05D000392 ORTHO05D002065 1.6e-12 76.6 67 53.7
ECA232G1868 Erigeron canadensis HOM05D000002 ORTHO05D002065 6.5e-11 71.2 140 35.0
SHI11937 Sapria himalayana HOM05D000392 ORTHO05D002065 6.5e-11 71.2 73 47.9
ClCG10G005890 Citrullus lanatus HOM05D000003 ORTHO05D000004 8.5e-11 70.9 61 55.7
PSO832G0813 Papaver somniferum HOM05D000002 ORTHO05D002065 8.5e-11 70.9 81 45.7
Sopen10g006660 Solanum pennellii HOM05D000392 ORTHO05D002065 1.1e-10 70.5 71 49.3
ECA236G3098 Erigeron canadensis HOM05D000006 ORTHO05D002065 2.5e-10 69.3 65 47.7
SHI10813 Sapria himalayana HOM05D000392 ORTHO05D002065 3.2e-10 68.9 57 56.1
SHI29116 Sapria himalayana HOM05D000392 ORTHO05D000610 3.2e-10 68.9 72 54.2
HanXRQChr17g0541591 Helianthus annuus HOM05D000002 ORTHO05D002065 7.2e-10 67.8 63 47.6
PSO339G0063 Papaver somniferum HOM05D000392 ORTHO05D002065 9.4e-10 67.4 81 42.0
SHI24009 Sapria himalayana HOM05D000392 ORTHO05D002065 1.2e-09 67.0 111 38.7
SHI11732 Sapria himalayana HOM05D000392 ORTHO05D002065 1.6e-09 66.6 60 55.0
Manes.01G054202 Manihot esculenta HOM05D000002 ORTHO05D002065 5.2e-08 61.6 46 63.0
SHI18174 Sapria himalayana HOM05D000002 ORTHO05D002065 5.2e-08 61.6 57 56.1
SHI28130 Sapria himalayana HOM05D000392 ORTHO05D002065 2.0e-07 59.7 51 58.8
SHI28751 Sapria himalayana HOM05D000392 ORTHO05D002065 2.6e-07 59.3 43 62.8
Aa31sc211G30 Aethionema arabicum HOM05D018491 ORTHO05D002065 3.3e-07 58.9 50 52.0
SGA_v2.0_scaffold6G03312 Striga asiatica HOM05D001472 ORTHO05D007811 4.4e-07 58.5 74 43.2


User provided reference genes

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