Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI26628 Sapria himalayana HOM05D003876 ORTHO05D004560 7.0e-176 620.5 322 100.0
Atru.chr2.3354 Acer truncatum HOM05D003876 ORTHO05D004560 3.1e-46 189.9 347 40.1
Dinv12032 Davidia involucrata HOM05D003876 ORTHO05D004560 3.8e-44 183.0 339 38.1
Dinv31299 Davidia involucrata HOM05D003876 ORTHO05D004560 1.9e-43 180.6 339 38.3
Ciclev10007711m.g Citrus clementina HOM05D003876 ORTHO05D004560 1.9e-40 170.6 326 39.3
Manes.15G088800 Manihot esculenta HOM05D003876 ORTHO05D004560 5.6e-40 169.1 342 36.8
QL11p042372 Quercus lobata HOM05D003876 ORTHO05D004560 1.6e-39 167.5 351 33.9
GSVIVG01037632001 Vitis vinifera HOM05D003876 ORTHO05D004560 8.1e-39 165.2 350 35.4
Potri.001G423600 Populus trichocarpa HOM05D003876 ORTHO05D004560 3.1e-38 163.3 355 36.1
CiPaw.11G188300 Carya illinoinensis HOM05D003876 ORTHO05D004560 1.5e-37 161.0 355 32.4
Eucgr.F03461 Eucalyptus grandis HOM05D003876 ORTHO05D004560 9.9e-37 158.3 352 33.5
Hund02060 Selenicereus undatus HOM05D003876 ORTHO05D004560 4.9e-36 156.0 355 34.4
Haze_09664 Corylus avellana HOM05D003876 ORTHO05D004560 1.1e-35 154.8 354 32.5
Thhalv10024185m.g Eutrema salsugineum HOM05D003876 ORTHO05D004560 1.1e-35 154.8 349 35.5
TAR626G1614 Trochodendron aralioides HOM05D003876 ORTHO05D004560 2.4e-35 153.7 355 34.9
Cc02_g11170 Coffea canephora HOM05D003876 ORTHO05D004560 3.2e-35 153.3 346 32.9
Prupe.4G211600 Prunus persica HOM05D003876 ORTHO05D004560 4.2e-35 152.9 346 33.5
Gorai.009G353000 Gossypium raimondii HOM05D003876 ORTHO05D004560 5.4e-35 152.5 348 33.6
CSS0014906 Camellia sinensis var. sinensis HOM05D003876 ORTHO05D004560 6.0e-34 149.1 349 35.5
Hma1.2p1_1927F.1_g307790 Hydrangea macrophylla HOM05D003876 ORTHO05D004560 6.0e-34 149.1 354 34.2
Sc07g0002730 Simmondsia chinensis HOM05D003876 ORTHO05D004560 7.8e-34 148.7 352 34.1
COL.COLO4_07980 Corchorus olitorius HOM05D003876 ORTHO05D004560 1.3e-33 147.9 352 32.7
MELO3C021122.2 Cucumis melo HOM05D003876 ORTHO05D004560 1.7e-33 147.5 346 34.7
FvH4_3g22520 Fragaria vesca HOM05D003876 ORTHO05D004560 1.7e-33 147.5 349 33.5
MSTRG.9162 Avicennia marina HOM05D003876 ORTHO05D004560 2.3e-33 147.1 356 32.9
RcHm_v2.0_Chr5g0039261 Rosa chinensis HOM05D003876 ORTHO05D004560 2.3e-33 147.1 349 32.4
Cpa.g.sc25.33 Carica papaya HOM05D003876 ORTHO05D004560 8.7e-33 145.2 257 40.5
Duzib213G0609 Durio zibethinus HOM05D003876 ORTHO05D004560 1.1e-32 144.8 351 33.6
TWI38G0366 Tripterygium wilfordii HOM05D003876 ORTHO05D004560 1.5e-32 144.4 347 34.0
Gohir.A05G328600 Gossypium hirsutum HOM05D003876 ORTHO05D004560 4.3e-32 142.9 351 32.8
Psat7g030440 Pisum sativum HOM05D003876 ORTHO05D004560 7.3e-32 142.1 360 31.4
MBI16_g24182_MAGBIO Magnolia biondii HOM05D003876 ORTHO05D004560 9.6e-32 141.7 348 32.5
MD03G1202300 Malus domestica HOM05D003876 ORTHO05D004560 9.6e-32 141.7 347 33.1
SalBow4G0850 Salvia bowleyana HOM05D003876 ORTHO05D004560 9.6e-32 141.7 356 33.4
Sp7g24970 Schrenkiella parvula HOM05D003876 ORTHO05D004560 1.6e-31 141.0 349 33.0
CsaV3_7G026680 Cucumis sativus L. HOM05D003876 ORTHO05D004560 2.8e-31 140.2 346 34.1
CANSAT21G0957 Cannabis sativa HOM05D003876 ORTHO05D004560 3.6e-31 139.8 344 33.7
HanXRQChr14g0456751 Helianthus annuus HOM05D003876 ORTHO05D004560 4.8e-31 139.4 339 34.5
ClCG09G008390 Citrullus lanatus HOM05D003876 ORTHO05D004560 6.2e-31 139.0 343 35.0
Lj4A311T24 Lonicera japonica HOM05D003876 ORTHO05D004560 6.2e-31 139.0 340 35.9
Lj6g0024588 Lotus japonicus HOM05D003876 ORTHO05D004560 1.1e-30 138.3 325 32.3
Sopen02g015700 Solanum pennellii HOM05D003876 ORTHO05D004560 1.1e-30 138.3 349 31.8
AL7G25820 Arabidopsis lyrata HOM05D003876 ORTHO05D004560 1.4e-30 137.9 349 33.2
Solyc02g065500.4 Solanum lycopersicum HOM05D003876 ORTHO05D004560 1.4e-30 137.9 349 32.1
Aqoxy1G03250 Aquilegia oxysepala HOM05D003876 ORTHO05D004560 2.4e-30 137.1 378 32.0
PGR031G0089 Punica granatum HOM05D003876 ORTHO05D004560 2.4e-30 137.1 345 33.3
AUR62015755 Chenopodium quinoa HOM05D003876 ORTHO05D004560 4.0e-30 136.3 351 34.5
SGA_v2.0_scaffold13G06370 Striga asiatica HOM05D003876 ORTHO05D004560 4.0e-30 136.3 333 33.0
AT4G27010 Arabidopsis thaliana HOM05D003876 ORTHO05D004560 5.3e-30 136.0 349 33.0
Peaxi162Scf01227g00036 Petunia axillaris HOM05D003876 ORTHO05D004560 1.2e-29 134.8 347 31.1
Aa31LG5G10400 Aethionema arabicum HOM05D003876 ORTHO05D004560 1.5e-29 134.4 351 33.0
Medtr3g051730 Medicago truncatula HOM05D003876 ORTHO05D004560 2.0e-29 134.0 349 29.8
A01p18170 Brassica napus HOM05D003876 ORTHO05D004560 9.9e-29 131.7 341 33.7
BraA01t01772Z Brassica rapa HOM05D003876 ORTHO05D004560 9.9e-29 131.7 341 33.7
TPR.G34799 Trifolium pratense HOM05D003876 ORTHO05D004560 1.3e-28 131.3 348 30.2
Ah.14g087580 Amaranthus hybridus HOM05D003876 ORTHO05D004560 3.8e-28 129.8 339 34.2
Rhsim03G0118500 Rhododendron simsii HOM05D003876 ORTHO05D004560 4.9e-28 129.4 428 31.1
EL10Ac4g07826 Beta vulgaris HOM05D003876 ORTHO05D004560 1.1e-27 128.3 353 32.9
Lalb_Chr15g0081151 Lupinus albus HOM05D003876 ORTHO05D004560 1.4e-27 127.9 349 28.9
Sed0026666 Sechium edule HOM05D003876 ORTHO05D004560 2.4e-27 127.1 349 32.4
C01p23130 Brassica napus HOM05D003876 ORTHO05D004560 3.2e-27 126.7 341 32.8
Carub.0007s1383 Capsella rubella HOM05D003876 ORTHO05D004560 3.2e-27 126.7 352 32.1
Thhalv10009735m.g Eutrema salsugineum HOM05D003876 ORTHO05D004560 4.2e-27 126.3 343 33.5
Phvul.006G043300 Phaseolus vulgaris HOM05D003876 ORTHO05D004560 2.1e-26 124.0 348 29.0
Gohir.D05G329600 Gossypium hirsutum HOM05D003876 ORTHO05D004560 4.6e-26 122.9 350 31.4
THA.LOC104817664 Tarenaya hassleriana HOM05D003876 ORTHO05D004560 7.9e-26 122.1 348 31.6
BolC1t02247H Brassica oleracea HOM05D003876 ORTHO05D004560 1.8e-25 120.9 340 31.5
CAN.G93.17 Capsicum annuum HOM05D003876 ORTHO05D004560 2.3e-25 120.6 347 29.7
Ca_01714_v3 Cicer arietinum L. HOM05D003876 ORTHO05D004560 1.5e-24 117.9 349 27.2
SalBow4G0132 Salvia bowleyana HOM05D003876 ORTHO05D004560 1.9e-24 117.5 411 29.2
VMungo0540G0476 Vigna mungo HOM05D003876 ORTHO05D004560 1.9e-24 117.5 323 29.7
Glyma.08G316100 Glycine max HOM05D003876 ORTHO05D004560 4.3e-24 116.3 351 27.6
AUR62020460 Chenopodium quinoa HOM05D003876 ORTHO05D004560 5.6e-24 115.9 389 30.3
AL1G51930 Arabidopsis lyrata HOM05D003876 ORTHO05D004560 2.1e-23 114.0 240 34.6
AL1G52050 Arabidopsis lyrata HOM05D003876 ORTHO05D004560 2.1e-23 114.0 243 34.6
ECA238G2706 Erigeron canadensis HOM05D003876 ORTHO05D004560 2.1e-23 114.0 331 32.9
vmacro22462 Vaccinium macrocarpon HOM05D003876 ORTHO05D004560 1.1e-22 111.7 248 36.3
Nitab4.5_0000071g0230 Nicotiana tabacum HOM05D003876 ORTHO05D004560 1.5e-21 107.8 305 29.8
Migut.F01968 Erythranthe guttata HOM05D003876 ORTHO05D004560 5.8e-21 105.9 337 29.1
arahy.Tifrunner.gnm1.ann1.CB0JBU Arachis hypogaea HOM05D003876 ORTHO05D004560 1.3e-20 104.8 357 26.3
BcaNung03576 Brassica carinata HOM05D003876 ORTHO05D004560 3.8e-20 103.2 245 33.1
CARHR229800 Cardamine hirsuta HOM05D003876 ORTHO05D004560 8.4e-20 102.1 326 30.7
arahy.Tifrunner.gnm1.ann1.S1L982 Arachis hypogaea HOM05D003876 ORTHO05D004560 1.1e-19 101.7 357 26.1
PSO675G8409 Papaver somniferum HOM05D003876 ORTHO05D004560 1.4e-19 101.3 366 29.2
AT1G72270 Arabidopsis thaliana HOM05D003876 ORTHO05D004560 2.4e-19 100.5 343 30.0
Carub.0004s0902 Capsella rubella HOM05D003876 ORTHO05D004560 2.4e-19 100.5 345 29.0
PSO541G2928 Papaver somniferum HOM05D003876 ORTHO05D004560 4.6e-18 96.3 362 29.6
Zm00001eb070180 Zea mays HOM05D003876 ORTHO05D004560 8.7e-17 92.0 341 27.0
Os04g0625300 Oryza sativa ssp. japonica HOM05D003876 ORTHO05D004560 2.1e-15 87.4 352 27.0
HPP92_009566 Vanilla planifolia HOM05D003876 ORTHO05D004560 4.8e-15 86.3 341 27.9
Oeu042740.2 Olea europaea HOM05D003876 ORTHO05D004560 8.1e-15 85.5 246 32.5
Nn1g07120 Nelumbo nucifera HOM05D003876 ORTHO05D004560 1.4e-14 84.7 106 45.3
CARHR234640 Cardamine hirsuta HOM05D003876 ORTHO05D004560 2.4e-14 84.0 215 31.2
Ciclev10007833m.g Citrus clementina HOM05D003876 ORTHO05D004560 2.4e-14 84.0 233 34.3
Lsat_1_v5_gn_2_112761 Lactuca sativa HOM05D003876 ORTHO05D004560 2.4e-14 84.0 234 30.8
FAN21G1021 Fragaria x ananassa HOM05D003876 ORTHO05D004560 4.0e-14 83.2 332 29.2
Nn004s41399 Nelumbo nucifera HOM05D003876 ORTHO05D004560 5.3e-14 82.8 241 32.8
FAN16G2970 Fragaria x ananassa HOM05D003876 ORTHO05D004560 1.4e-11 74.7 220 35.9
SEGI_24019 Sequoiadendron giganteum HOM05D003876 ORTHO05D004560 1.9e-11 74.3 340 26.8
CDE12G0710 Ceratophyllum demersum HOM05D003876 ORTHO05D004560 3.2e-11 73.6 244 29.5
ATR0752G210 Amborella trichopoda HOM05D003876 ORTHO05D004560 5.1e-09 66.2 247 31.2
Hma1.2p1_1458F.1_g284750 Hydrangea macrophylla HOM05D003876 ORTHO05D004560 1.9e-08 64.3 332 24.7
MELO3C029177.2 Cucumis melo HOM05D003876 ORTHO05D004560 1.6e-07 61.2 54 51.9
RcHm_v2.0_Chr5g0039221 Rosa chinensis HOM05D003876 ORTHO05D004560 2.8e-07 60.5 202 33.2
PSO478G0467 Papaver somniferum HOM05D003876 ORTHO05D004560 6.9e-06 55.8 102 37.3


User provided reference genes

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