Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI23374 Sapria himalayana HOM05D003172 ORTHO05D003708 4.5e-83 311.2 159 100.0
Lalb_Chr14g0364401 Lupinus albus HOM05D003172 ORTHO05D003708 6.4e-37 157.9 83 97.6
CAN.G662.2 Capsicum annuum HOM05D003172 ORTHO05D003708 1.9e-36 156.4 83 97.6
DCAR_016860 Daucus carota HOM05D003172 ORTHO05D003708 1.9e-36 156.4 83 97.6
HanXRQChr09g0266331 Helianthus annuus HOM05D003172 ORTHO05D003708 1.9e-36 156.4 83 97.6
HanXRQChr14g0438971 Helianthus annuus HOM05D003172 ORTHO05D003708 1.9e-36 156.4 83 97.6
Lsat_1_v5_gn_2_57861 Lactuca sativa HOM05D003172 ORTHO05D003708 1.9e-36 156.4 83 97.6
Peaxi162Scf00076g00918 Petunia axillaris HOM05D003172 ORTHO05D003708 1.9e-36 156.4 83 97.6
Rhsim03G0000400 Rhododendron simsii HOM05D003172 ORTHO05D003708 1.9e-36 156.4 83 97.6
Solyc12g019860.2 Solanum lycopersicum HOM05D003172 ORTHO05D003708 1.9e-36 156.4 83 97.6
Sopen12g010260 Solanum pennellii HOM05D003172 ORTHO05D003708 1.9e-36 156.4 83 97.6
Psat3g089480 Pisum sativum HOM05D003172 ORTHO05D003708 2.4e-36 156.0 83 97.6
CSS0035842 Camellia sinensis var. sinensis HOM05D003172 ORTHO05D003708 4.1e-36 155.2 83 96.4
DCAR_013693 Daucus carota HOM05D003172 ORTHO05D003708 4.1e-36 155.2 83 96.4
Rhsim04G0086600 Rhododendron simsii HOM05D003172 ORTHO05D003708 4.1e-36 155.2 83 96.4
GSVIVG01033382001 Vitis vinifera HOM05D003172 ORTHO05D003708 4.1e-36 155.2 83 96.4
Atru.chr2.1341 Acer truncatum HOM05D003172 ORTHO05D003708 5.4e-36 154.8 83 96.4
Ah.04g153270 Amaranthus hybridus HOM05D003172 ORTHO05D003708 5.4e-36 154.8 83 96.4
Aqoxy2G00568 Aquilegia oxysepala HOM05D003172 ORTHO05D003708 5.4e-36 154.8 83 95.2
arahy.Tifrunner.gnm1.ann1.1H4ABR Arachis hypogaea HOM05D003172 ORTHO05D003708 5.4e-36 154.8 83 96.4
arahy.Tifrunner.gnm1.ann1.74GIZX Arachis hypogaea HOM05D003172 ORTHO05D003708 5.4e-36 154.8 83 96.4
arahy.Tifrunner.gnm1.ann1.TX5S28 Arachis hypogaea HOM05D003172 ORTHO05D003708 5.4e-36 154.8 83 96.4
arahy.Tifrunner.gnm1.ann1.WX09DK Arachis hypogaea HOM05D003172 ORTHO05D003708 5.4e-36 154.8 83 96.4
EL10Ac3g06798 Beta vulgaris HOM05D003172 ORTHO05D003708 5.4e-36 154.8 83 96.4
Cfa016432 Carpinus fangiana HOM05D003172 ORTHO05D003708 5.4e-36 154.8 83 96.4
AUR62032669 Chenopodium quinoa HOM05D003172 ORTHO05D003708 5.4e-36 154.8 83 96.4
Ca_08256_v3 Cicer arietinum L. HOM05D003172 ORTHO05D003708 5.4e-36 154.8 83 96.4
Ciclev10018788m.g Citrus clementina HOM05D003172 ORTHO05D003708 5.4e-36 154.8 83 96.4
Haze_19406 Corylus avellana HOM05D003172 ORTHO05D003708 5.4e-36 154.8 83 96.4
Glyma.16G042600 Glycine max HOM05D003172 ORTHO05D003708 5.4e-36 154.8 83 96.4
Glyma.16G152500 Glycine max HOM05D003172 ORTHO05D003708 5.4e-36 154.8 83 96.4
HanXRQChr09g0252941 Helianthus annuus HOM05D003172 ORTHO05D003708 5.4e-36 154.8 83 96.4
Lj1g0020713 Lotus japonicus HOM05D003172 ORTHO05D003708 5.4e-36 154.8 83 96.4
MD06G1237800 Malus domestica HOM05D003172 ORTHO05D003708 5.4e-36 154.8 83 96.4
MD14G1244600 Malus domestica HOM05D003172 ORTHO05D003708 5.4e-36 154.8 83 96.4
Manes.09G142400 Manihot esculenta HOM05D003172 ORTHO05D003708 5.4e-36 154.8 83 96.4
Medtr7g085350 Medicago truncatula HOM05D003172 ORTHO05D003708 5.4e-36 154.8 83 96.4
Phvul.001G109300 Phaseolus vulgaris HOM05D003172 ORTHO05D003708 5.4e-36 154.8 83 96.4
Prupe.5G242100 Prunus persica HOM05D003172 ORTHO05D003708 5.4e-36 154.8 83 96.4
QL07p020343 Quercus lobata HOM05D003172 ORTHO05D003708 5.4e-36 154.8 83 96.4
RcHm_v2.0_Chr7g0177371 Rosa chinensis HOM05D003172 ORTHO05D003708 5.4e-36 154.8 83 96.4
Sc19g0006520 Simmondsia chinensis HOM05D003172 ORTHO05D003708 5.4e-36 154.8 83 96.4
THA.LOC104801500 Tarenaya hassleriana HOM05D003172 ORTHO05D003708 5.4e-36 154.8 83 96.4
THA.LOC104805751 Tarenaya hassleriana HOM05D003172 ORTHO05D003708 5.4e-36 154.8 83 96.4
THA.LOC104805989 Tarenaya hassleriana HOM05D003172 ORTHO05D003708 5.4e-36 154.8 83 96.4
TPR.G5918 Trifolium pratense HOM05D003172 ORTHO05D003708 5.4e-36 154.8 83 96.4
TWI34G0902 Tripterygium wilfordii HOM05D003172 ORTHO05D003708 5.4e-36 154.8 83 96.4
VMungo0464G1094 Vigna mungo HOM05D003172 ORTHO05D003708 5.4e-36 154.8 83 96.4
VMungo1383G1523 Vigna mungo HOM05D003172 ORTHO05D003708 5.4e-36 154.8 83 96.4
ATR0559G169 Amborella trichopoda HOM05D003172 ORTHO05D003708 7.1e-36 154.5 83 95.2
ATR0697G199 Amborella trichopoda HOM05D003172 ORTHO05D003708 7.1e-36 154.5 83 95.2
Actinidia22095 Actinidia chinensis HOM05D003172 ORTHO05D003708 9.2e-36 154.1 83 96.4
MSTRG.26061 Avicennia marina HOM05D003172 ORTHO05D003708 9.2e-36 154.1 83 96.4
BcaB01g05182 Brassica carinata HOM05D003172 ORTHO05D003708 9.2e-36 154.1 83 95.2
BcaNung04945 Brassica carinata HOM05D003172 ORTHO05D003708 9.2e-36 154.1 83 95.2
BcaNung07324 Brassica carinata HOM05D003172 ORTHO05D003708 9.2e-36 154.1 83 95.2
A03p08720 Brassica napus HOM05D003172 ORTHO05D003708 9.2e-36 154.1 83 95.2
C03p10170 Brassica napus HOM05D003172 ORTHO05D003708 9.2e-36 154.1 83 95.2
BolC3t13502H Brassica oleracea HOM05D003172 ORTHO05D003708 9.2e-36 154.1 83 95.2
BraA03t10195Z Brassica rapa HOM05D003172 ORTHO05D003708 9.2e-36 154.1 83 95.2
ClCG10G013300 Citrullus lanatus HOM05D003172 ORTHO05D003708 9.2e-36 154.1 83 95.2
Cc06_g21440 Coffea canephora HOM05D003172 ORTHO05D003708 9.2e-36 154.1 83 96.4
MELO3C026894.2 Cucumis melo HOM05D003172 ORTHO05D003708 9.2e-36 154.1 83 95.2
CsaV3_3G043330 Cucumis sativus L. HOM05D003172 ORTHO05D003708 9.2e-36 154.1 83 95.2
Migut.K00002 Erythranthe guttata HOM05D003172 ORTHO05D003708 9.2e-36 154.1 83 96.4
Migut.N01517 Erythranthe guttata HOM05D003172 ORTHO05D003708 9.2e-36 154.1 83 96.4
Thhalv10012672m.g Eutrema salsugineum HOM05D003172 ORTHO05D003708 9.2e-36 154.1 83 95.2
Glyma.02G071300 Glycine max HOM05D003172 ORTHO05D003708 9.2e-36 154.1 83 95.2
Glyma.19G109500 Glycine max HOM05D003172 ORTHO05D003708 9.2e-36 154.1 83 95.2
Hma1.2p1_0183F.1_g080920 Hydrangea macrophylla HOM05D003172 ORTHO05D003708 9.2e-36 154.1 83 96.4
Oeu026879.1 Olea europaea HOM05D003172 ORTHO05D003708 9.2e-36 154.1 83 95.2
PSO339G0422 Papaver somniferum HOM05D003172 ORTHO05D003708 9.2e-36 154.1 83 94.0
Sp6g26090 Schrenkiella parvula HOM05D003172 ORTHO05D003708 9.2e-36 154.1 83 95.2
vmacro09149 Vaccinium macrocarpon HOM05D003172 ORTHO05D003708 9.2e-36 154.1 83 96.4
THA.LOC104820736 Tarenaya hassleriana HOM05D003172 ORTHO05D003708 1.2e-35 153.7 83 95.2
MBI11_g10542_MAGBIO Magnolia biondii HOM05D003172 ORTHO05D003708 1.6e-35 153.3 83 94.0
PGR142G1025 Punica granatum HOM05D003172 ORTHO05D003708 1.6e-35 153.3 83 95.2
TAR369G0048 Trochodendron aralioides HOM05D003172 ORTHO05D003708 1.6e-35 153.3 83 94.0
AL6G29440 Arabidopsis lyrata HOM05D003172 ORTHO05D003708 2.1e-35 152.9 83 94.0
AL6G29450 Arabidopsis lyrata HOM05D003172 ORTHO05D003708 2.1e-35 152.9 83 94.0
AT5G18230 Arabidopsis thaliana HOM05D003172 ORTHO05D003708 2.1e-35 152.9 83 94.0
Carub.0006s1651 Capsella rubella HOM05D003172 ORTHO05D003708 2.1e-35 152.9 83 94.0
Sed0012949 Sechium edule HOM05D003172 ORTHO05D003708 2.1e-35 152.9 83 91.6
BcaB08g36694 Brassica carinata HOM05D003172 ORTHO05D003708 2.7e-35 152.5 83 94.0
BcaC04g18714 Brassica carinata HOM05D003172 ORTHO05D003708 2.7e-35 152.5 83 94.0
A10p21290 Brassica napus HOM05D003172 ORTHO05D003708 2.7e-35 152.5 83 94.0
C09p58750 Brassica napus HOM05D003172 ORTHO05D003708 2.7e-35 152.5 83 94.0
BolC9t58717H Brassica oleracea HOM05D003172 ORTHO05D003708 2.7e-35 152.5 83 94.0
BraA10t44192Z Brassica rapa HOM05D003172 ORTHO05D003708 2.7e-35 152.5 83 94.0
CANSAT78G1302 Cannabis sativa HOM05D003172 ORTHO05D003708 2.7e-35 152.5 83 95.2
COL.COLO4_13621 Corchorus olitorius HOM05D003172 ORTHO05D003708 2.7e-35 152.5 83 95.2
Duzib106G1828 Durio zibethinus HOM05D003172 ORTHO05D003708 2.7e-35 152.5 83 95.2
Gohir.A11G257900 Gossypium hirsutum HOM05D003172 ORTHO05D003708 2.7e-35 152.5 83 95.2
Gohir.D11G267900 Gossypium hirsutum HOM05D003172 ORTHO05D003708 2.7e-35 152.5 83 95.2
Gorai.007G287600 Gossypium raimondii HOM05D003172 ORTHO05D003708 2.7e-35 152.5 83 95.2
Sed0019950 Sechium edule HOM05D003172 ORTHO05D003708 2.7e-35 152.5 83 94.0
Hund24843 Selenicereus undatus HOM05D003172 ORTHO05D003708 2.7e-35 152.5 83 95.2
SGA_v2.0_scaffold274G46522 Striga asiatica HOM05D003172 ORTHO05D003708 2.7e-35 152.5 83 95.2
THA.LOC104802864 Tarenaya hassleriana HOM05D003172 ORTHO05D003708 2.7e-35 152.5 83 94.0
Thecc.05G292800 Theobroma cacao HOM05D003172 ORTHO05D003708 2.7e-35 152.5 83 95.2
Gohir.A13G105600 Gossypium hirsutum HOM05D003172 ORTHO05D003708 3.5e-35 152.1 83 94.0
Gohir.D13G109400 Gossypium hirsutum HOM05D003172 ORTHO05D003708 3.5e-35 152.1 83 94.0
Gorai.013G123000 Gossypium raimondii HOM05D003172 ORTHO05D003708 3.5e-35 152.1 83 94.0
Manes.08G149400 Manihot esculenta HOM05D003172 ORTHO05D003708 3.5e-35 152.1 83 95.2
Mapoly0027s0010 Marchantia polymorpha HOM05D003172 ORTHO05D003708 3.5e-35 152.1 83 92.8
Phvul.004G079000 Phaseolus vulgaris HOM05D003172 ORTHO05D003708 3.5e-35 152.1 83 94.0
Potri.019G032800 Populus trichocarpa HOM05D003172 ORTHO05D003708 4.6e-35 151.8 83 94.0
Sabra19G0041100 Salix brachista HOM05D003172 ORTHO05D003708 4.6e-35 151.8 83 94.0
SGA_v2.0_scaffold94G28397 Striga asiatica HOM05D003172 ORTHO05D003708 4.6e-35 151.8 83 95.2
TAR623G0379 Trochodendron aralioides HOM05D003172 ORTHO05D003708 4.6e-35 151.8 83 94.0
unitig_26.g9324 Utricularia gibba HOM05D003172 ORTHO05D003708 6.0e-35 151.4 83 95.2
Aa31LG11G11360 Aethionema arabicum HOM05D003172 ORTHO05D003708 1.0e-34 150.6 83 92.8
CARHR194830 Cardamine hirsuta HOM05D003172 ORTHO05D003708 1.0e-34 150.6 83 91.6
CARHR217100 Cardamine hirsuta HOM05D003172 ORTHO05D003708 1.0e-34 150.6 113 73.5
Duzib177G0131 Durio zibethinus HOM05D003172 ORTHO05D003708 1.0e-34 150.6 83 94.0
FvH4_5g18220 Fragaria vesca HOM05D003172 ORTHO05D003708 1.0e-34 150.6 83 94.0
FAN04G3171 Fragaria x ananassa HOM05D003172 ORTHO05D003708 1.0e-34 150.6 83 94.0
FAN08G0762 Fragaria x ananassa HOM05D003172 ORTHO05D003708 1.0e-34 150.6 83 94.0
FAN13G1822 Fragaria x ananassa HOM05D003172 ORTHO05D003708 1.0e-34 150.6 83 94.0
FAN18G2753 Fragaria x ananassa HOM05D003172 ORTHO05D003708 1.0e-34 150.6 83 94.0
Lalb_Chr06g0173911 Lupinus albus HOM05D003172 ORTHO05D003708 1.0e-34 150.6 83 91.6
A03p08740 Brassica napus HOM05D003172 ORTHO05D003708 1.3e-34 150.2 83 94.0
Potri.013G059800 Populus trichocarpa HOM05D003172 ORTHO05D003708 1.3e-34 150.2 83 92.8
unitig_736.g22311 Utricularia gibba HOM05D003172 ORTHO05D003708 2.3e-34 149.4 83 94.0
Lalb_Chr21g0317121 Lupinus albus HOM05D003172 ORTHO05D003708 3.0e-34 149.1 83 90.4
Lsat_1_v5_gn_8_47041 Lactuca sativa HOM05D003172 ORTHO05D003708 5.6e-33 144.8 82 90.2
ECA233G5856 Erigeron canadensis HOM05D003172 ORTHO05D003708 8.1e-32 141.0 83 86.7
AUR62035298 Chenopodium quinoa HOM05D003172 ORTHO05D003708 3.1e-31 139.0 113 70.8
Dinv37006 Davidia involucrata HOM05D003172 ORTHO05D003708 4.0e-31 138.7 83 90.4
ECA238G3293 Erigeron canadensis HOM05D003172 ORTHO05D003708 4.0e-31 138.7 83 90.4
TWI32G0690 Tripterygium wilfordii HOM05D003172 ORTHO05D003708 4.0e-31 138.7 83 90.4
HanXRQChr07g0193171 Helianthus annuus HOM05D003172 ORTHO05D003708 8.9e-31 137.5 83 89.2
Atru.chr2.1318 Acer truncatum HOM05D003172 ORTHO05D003708 1.2e-30 137.1 83 89.2
CiPaw.09G000900 Carya illinoinensis HOM05D003172 ORTHO05D003708 1.2e-30 137.1 83 89.2
Dinv14587 Davidia involucrata HOM05D003172 ORTHO05D003708 1.2e-30 137.1 83 89.2
Nn2g15889 Nelumbo nucifera HOM05D003172 ORTHO05D003708 1.2e-30 137.1 83 88.0
Nn7g35818 Nelumbo nucifera HOM05D003172 ORTHO05D003708 1.2e-30 137.1 83 88.0
Lj2C357G5 Lonicera japonica HOM05D003172 ORTHO05D003708 2.0e-30 136.3 83 89.2
PSO384G1776 Papaver somniferum HOM05D003172 ORTHO05D003708 2.0e-30 136.3 83 86.7
CDE04G1193 Ceratophyllum demersum HOM05D003172 ORTHO05D003708 3.4e-30 135.6 83 86.7
CDE07G1719 Ceratophyllum demersum HOM05D003172 ORTHO05D003708 3.4e-30 135.6 83 86.7
Eucgr.A02083 Eucalyptus grandis HOM05D003172 ORTHO05D003708 3.4e-30 135.6 83 88.0
HPP92_012145 Vanilla planifolia HOM05D003172 ORTHO05D003708 4.4e-30 135.2 116 67.2
Os03g0652100 Oryza sativa ssp. japonica HOM05D003172 ORTHO05D003708 7.6e-30 134.4 83 86.7
Zm00001eb052870 Zea mays HOM05D003172 ORTHO05D003708 7.6e-30 134.4 83 86.7
Zm00001eb218410 Zea mays HOM05D003172 ORTHO05D003708 7.6e-30 134.4 83 86.7
Lsat_1_v5_gn_6_36740 Lactuca sativa HOM05D003172 ORTHO05D003708 3.7e-29 132.1 83 85.5
Pp3c24_19770 Physcomitrium patens HOM05D003172 ORTHO05D003708 2.4e-28 129.4 83 83.1
Mapoly0036s0115 Marchantia polymorpha HOM05D003172 ORTHO05D003708 3.2e-28 129.0 83 81.9
CBR_g17178 Chara braunii HOM05D003172 ORTHO05D003708 4.1e-28 128.6 83 80.7
Lsat_1_v5_gn_8_48920 Lactuca sativa HOM05D003172 ORTHO05D003708 1.6e-27 126.7 83 81.9
Pp3c8_22460 Physcomitrium patens HOM05D003172 ORTHO05D003708 2.1e-27 126.3 83 80.7
Aa31LG11G11350 Aethionema arabicum HOM05D003172 ORTHO05D003708 1.8e-23 113.2 85 72.9
Migut.I01216 Erythranthe guttata HOM05D003172 ORTHO05D003708 3.1e-23 112.5 83 77.1
Nitab4.5_0000001g0360 Nicotiana tabacum HOM05D003172 ORTHO05D003708 8.9e-23 110.9 90 71.1
MCO08G071 Micromonas commoda HOM05D003172 ORTHO05D003708 8.7e-18 94.4 83 60.2
Oeu035612.2 Olea europaea HOM05D003172 ORTHO05D003708 7.3e-17 91.3 47 97.9
Cpa.g.sc785.1 Carica papaya HOM05D003172 ORTHO05D003708 6.2e-16 88.2 45 97.8
Actinidia30565 Actinidia chinensis HOM05D003172 ORTHO05D003708 1.1e-15 87.4 44 97.7
SEGI_27722 Sequoiadendron giganteum HOM05D003172 ORTHO05D003708 1.1e-15 87.4 60 75.0
CBR_g48494 Chara braunii HOM05D003172 ORTHO05D003708 3.1e-15 85.9 82 53.7
C02p09770 Brassica napus HOM05D003172 ORTHO05D003708 8.4e-13 77.8 58 67.2
Lsat_1_v5_gn_8_47061 Lactuca sativa HOM05D000041 ORTHO05D000452 4.2e-12 75.5 56 71.4
Nitab4.5_0003153g0030 Nicotiana tabacum HOM05D003172 ORTHO05D003708 1.6e-11 73.6 110 49.1
PRCOL_00002674 Prasinoderma coloniale HOM05D003172 ORTHO05D003708 3.5e-11 72.4 78 48.7
SHI18842 Sapria himalayana HOM05D003172 ORTHO05D003708 1.7e-10 70.1 40 87.5
Lsat_1_v5_gn_8_137421 Lactuca sativa HOM05D000658 ORTHO05D000826 6.6e-10 68.2 39 87.2
SEGI_39352 Sequoiadendron giganteum HOM05D003172 ORTHO05D003708 8.7e-10 67.8 39 87.2
Lsat_1_v5_gn_8_96981 Lactuca sativa HOM05D001957 ORTHO05D004161 2.5e-09 66.2 39 87.2
Lsat_1_v5_gn_9_33601 Lactuca sativa HOM05D003172 ORTHO05D003526 2.5e-09 66.2 46 73.9
Lsat_1_v5_gn_4_84780 Lactuca sativa HOM05D003172 ORTHO05D007223 4.3e-09 65.5 105 43.8
HanXRQChr09g0245801 Helianthus annuus HOM05D003172 ORTHO05D003708 1.1e-07 60.8 31 96.8
Cre04.g227350 Chlamydomonas reinhardtii HOM05D003172 ORTHO05D003708 1.8e-07 60.1 60 56.7
SHI09754 Sapria himalayana HOM05D000105 ORTHO05D000023 3.1e-07 59.3 32 90.6
Migut.K00001 Erythranthe guttata HOM05D003172 ORTHO05D003708 4.0e-07 58.9 30 96.7
Lsat_1_v5_gn_1_45160 Lactuca sativa HOM05D003203 ORTHO05D003526 1.2e-06 57.4 34 85.3
Lsat_1_v5_gn_8_136320 Lactuca sativa HOM05D000324 ORTHO05D004875 9.9e-06 54.3 45 66.7


User provided reference genes

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