Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI18941 Sapria himalayana HOM05D003188 ORTHO05D003602 2.2e-91 339.0 172 100.0
GSVIVG01029101001 Vitis vinifera HOM05D003188 ORTHO05D003602 1.4e-58 229.9 210 59.0
MD06G1210700 Malus domestica HOM05D003188 ORTHO05D003602 3.3e-55 218.8 211 56.4
Manes.01G020800 Manihot esculenta HOM05D003188 ORTHO05D003602 4.3e-55 218.4 211 58.3
MD14G1221400 Malus domestica HOM05D003188 ORTHO05D003602 2.1e-54 216.1 211 55.5
TWI15G1168 Tripterygium wilfordii HOM05D003188 ORTHO05D003602 2.1e-54 216.1 210 56.7
ClCG06G015050 Citrullus lanatus HOM05D003188 ORTHO05D003602 2.8e-54 215.7 232 53.4
Gohir.D11G162400 Gossypium hirsutum HOM05D003188 ORTHO05D003602 4.8e-54 214.9 211 57.8
TWI81G0274 Tripterygium wilfordii HOM05D003188 ORTHO05D003602 6.2e-54 214.5 210 56.2
Ciclev10019993m.g Citrus clementina HOM05D003188 ORTHO05D003602 1.1e-53 213.8 211 57.8
MELO3C017285.2 Cucumis melo HOM05D003188 ORTHO05D003602 1.1e-53 213.8 211 57.8
Gorai.007G172700 Gossypium raimondii HOM05D003188 ORTHO05D003602 1.4e-53 213.4 211 57.3
Sed0010135 Sechium edule HOM05D003188 ORTHO05D003602 1.8e-53 213.0 211 57.3
Thecc.01G174500 Theobroma cacao HOM05D003188 ORTHO05D003602 1.8e-53 213.0 211 58.3
Gohir.A11G155400 Gossypium hirsutum HOM05D003188 ORTHO05D003602 2.4e-53 212.6 211 57.3
Prupe.5G216800 Prunus persica HOM05D003188 ORTHO05D003602 2.4e-53 212.6 210 55.2
MSTRG.6539 Avicennia marina HOM05D003188 ORTHO05D003602 3.1e-53 212.2 211 55.9
Lj5A144T29 Lonicera japonica HOM05D003188 ORTHO05D003602 3.1e-53 212.2 210 57.1
Cc04_g07560 Coffea canephora HOM05D003188 ORTHO05D003602 6.9e-53 211.1 211 55.5
Duzib138G0729 Durio zibethinus HOM05D003188 ORTHO05D003602 9.0e-53 210.7 212 57.1
Nn3g17701 Nelumbo nucifera HOM05D003188 ORTHO05D003602 1.5e-52 209.9 211 55.9
QL10p022977 Quercus lobata HOM05D003188 ORTHO05D003602 2.0e-52 209.5 210 53.8
TAR371G0535 Trochodendron aralioides HOM05D003188 ORTHO05D003602 2.0e-52 209.5 211 56.9
Cfa016042 Carpinus fangiana HOM05D003188 ORTHO05D003602 2.6e-52 209.1 211 55.9
CsaV3_1G003600 Cucumis sativus L. HOM05D003188 ORTHO05D003602 3.4e-52 208.8 211 56.9
Haze_18599 Corylus avellana HOM05D003188 ORTHO05D003602 7.6e-52 207.6 211 55.5
Actinidia30194 Actinidia chinensis HOM05D003188 ORTHO05D003602 1.3e-51 206.8 211 54.5
Atru.chr12.1495 Acer truncatum HOM05D003188 ORTHO05D003602 6.4e-51 204.5 211 56.9
PGR083G2637 Punica granatum HOM05D003188 ORTHO05D003602 6.4e-51 204.5 210 54.3
SalBow7G4400 Salvia bowleyana HOM05D003188 ORTHO05D003602 6.4e-51 204.5 211 54.5
DCAR_015131 Daucus carota HOM05D003188 ORTHO05D003602 2.4e-50 202.6 211 55.0
Lj4g0026321 Lotus japonicus HOM05D003188 ORTHO05D003602 2.4e-50 202.6 211 55.5
Eucgr.B00695 Eucalyptus grandis HOM05D003188 ORTHO05D003602 4.2e-50 201.8 210 55.7
Atru.chr2.2945 Acer truncatum HOM05D003188 ORTHO05D003602 7.1e-50 201.1 211 55.9
SGA_v2.0_scaffold34G13894 Striga asiatica HOM05D003188 ORTHO05D003602 7.1e-50 201.1 225 50.7
Manes.12G158000 Manihot esculenta HOM05D003188 ORTHO05D003602 9.3e-50 200.7 211 56.4
CDE05G2945 Ceratophyllum demersum HOM05D003188 ORTHO05D003602 1.2e-49 200.3 212 54.2
CiPaw.09G173500 Carya illinoinensis HOM05D003188 ORTHO05D003602 1.6e-49 199.9 211 53.1
RcHm_v2.0_Chr7g0184541 Rosa chinensis HOM05D003188 ORTHO05D003602 1.6e-49 199.9 211 52.6
Ca_02535_v3 Cicer arietinum L. HOM05D003188 ORTHO05D003602 2.1e-49 199.5 210 54.8
CDE05G0460 Ceratophyllum demersum HOM05D003188 ORTHO05D003602 3.5e-49 198.7 212 53.3
TAR629G2124 Trochodendron aralioides HOM05D003188 ORTHO05D003602 4.6e-49 198.4 210 54.3
Lalb_Chr12g0197531 Lupinus albus HOM05D003188 ORTHO05D003602 7.9e-49 197.6 210 53.8
MSTRG.14163 Avicennia marina HOM05D003188 ORTHO05D003602 1.0e-48 197.2 211 51.2
Lalb_Chr12g0197111 Lupinus albus HOM05D003188 ORTHO05D003602 1.3e-48 196.8 210 53.3
COL.COLO4_19984 Corchorus olitorius HOM05D003188 ORTHO05D003602 2.3e-48 196.1 212 54.2
CANSAT64G2546 Cannabis sativa HOM05D003188 ORTHO05D003602 3.0e-48 195.7 212 54.2
Lj9A216T28 Lonicera japonica HOM05D003188 ORTHO05D003602 3.0e-48 195.7 216 54.6
Sc02g0004270 Simmondsia chinensis HOM05D003188 ORTHO05D003602 5.1e-48 194.9 211 52.1
THA.LOC104811602 Tarenaya hassleriana HOM05D003188 ORTHO05D003602 1.1e-47 193.7 210 51.9
Lsat_1_v5_gn_8_11621 Lactuca sativa HOM05D003188 ORTHO05D003602 3.3e-47 192.2 211 52.1
SEGI_20097 Sequoiadendron giganteum HOM05D003188 ORTHO05D003602 3.3e-47 192.2 211 51.7
Glyma.05G013500 Glycine max HOM05D003188 ORTHO05D003602 4.3e-47 191.8 211 54.5
Sabra10G0074600 Salix brachista HOM05D003188 ORTHO05D003602 4.3e-47 191.8 131 71.8
Potri.010G102000 Populus trichocarpa HOM05D003188 ORTHO05D003602 5.6e-47 191.4 131 71.8
Duzib133G0881 Durio zibethinus HOM05D003188 ORTHO05D003602 7.4e-47 191.0 213 54.9
FAN18G0006 Fragaria x ananassa HOM05D003188 ORTHO05D003602 7.4e-47 191.0 211 53.1
arahy.Tifrunner.gnm1.ann1.36CJM4 Arachis hypogaea HOM05D003188 ORTHO05D003602 9.6e-47 190.7 210 53.8
Glyma.17G121700 Glycine max HOM05D003188 ORTHO05D003602 9.6e-47 190.7 211 53.6
Oeu050638.1 Olea europaea HOM05D003188 ORTHO05D003602 9.6e-47 190.7 211 52.6
Potri.015G051000 Populus trichocarpa HOM05D003188 ORTHO05D003602 9.6e-47 190.7 203 53.7
HPP92_009419 Vanilla planifolia HOM05D003188 ORTHO05D003602 1.3e-46 190.3 211 52.6
arahy.Tifrunner.gnm1.ann1.MGXB0Y Arachis hypogaea HOM05D003188 ORTHO05D003602 2.1e-46 189.5 211 53.1
Phvul.003G177500 Phaseolus vulgaris HOM05D003188 ORTHO05D003602 2.1e-46 189.5 211 51.7
VMungo1309G2361 Vigna mungo HOM05D003188 ORTHO05D003602 2.8e-46 189.1 211 52.6
Sopen03g038640 Solanum pennellii HOM05D003188 ORTHO05D003602 6.2e-46 188.0 209 52.2
FAN08G1208 Fragaria x ananassa HOM05D003188 ORTHO05D003602 8.1e-46 187.6 219 51.1
Solyc03g119790.3 Solanum lycopersicum HOM05D003188 ORTHO05D003602 8.1e-46 187.6 209 52.2
Glyma.06G210400 Glycine max HOM05D003188 ORTHO05D003602 1.4e-45 186.8 211 52.1
HanXRQChr02g0055261 Helianthus annuus HOM05D003188 ORTHO05D003602 1.8e-45 186.4 210 51.4
VMungo1215G2257 Vigna mungo HOM05D003188 ORTHO05D003602 1.8e-45 186.4 209 51.7
Aqoxy3G00385 Aquilegia oxysepala HOM05D003188 ORTHO05D003602 2.4e-45 186.0 211 49.8
Gorai.001G093700 Gossypium raimondii HOM05D003188 ORTHO05D003602 2.4e-45 186.0 211 51.2
ATR0787G140 Amborella trichopoda HOM05D003188 ORTHO05D003602 3.1e-45 185.7 210 50.0
CAN.G438.112 Capsicum annuum HOM05D003188 ORTHO05D003602 3.1e-45 185.7 209 52.2
FvH4_5g12750 Fragaria vesca HOM05D003188 ORTHO05D003602 3.1e-45 185.7 211 52.1
Gohir.D07G087600 Gossypium hirsutum HOM05D003188 ORTHO05D003602 5.3e-45 184.9 211 50.7
PGSC0003DMG400005704 Solanum tuberosum HOM05D003188 ORTHO05D003602 1.2e-44 183.7 209 52.2
THA.LOC104803141 Tarenaya hassleriana HOM05D003188 ORTHO05D003602 1.5e-44 183.3 131 67.2
Aqoxy5G00582 Aquilegia oxysepala HOM05D003188 ORTHO05D003602 2.0e-44 183.0 210 50.5
CARHR002580 Cardamine hirsuta HOM05D003188 ORTHO05D003602 2.0e-44 183.0 206 53.9
Nitab4.5_0000410g0090 Nicotiana tabacum HOM05D003188 ORTHO05D003602 2.0e-44 183.0 209 52.6
Nitab4.5_0003716g0120 Nicotiana tabacum HOM05D003188 ORTHO05D003602 2.0e-44 183.0 209 52.6
Glyma.04G146000 Glycine max HOM05D003188 ORTHO05D003602 4.5e-44 181.8 211 51.7
Phvul.009G200700 Phaseolus vulgaris HOM05D003188 ORTHO05D003602 4.5e-44 181.8 211 52.1
Medtr8g077000 Medicago truncatula HOM05D003188 ORTHO05D003602 7.6e-44 181.0 227 48.0
PSO017G4721 Papaver somniferum HOM05D003188 ORTHO05D003602 9.9e-44 180.6 210 51.4
PSO478G1890 Papaver somniferum HOM05D003188 ORTHO05D003602 9.9e-44 180.6 210 51.4
Peaxi162Scf00015g00637 Petunia axillaris HOM05D003188 ORTHO05D003602 2.2e-43 179.5 208 51.0
A10p01840 Brassica napus HOM05D003188 ORTHO05D003602 4.9e-43 178.3 206 52.4
C05p01820 Brassica napus HOM05D003188 ORTHO05D003602 4.9e-43 178.3 206 52.4
BolC5t28960H Brassica oleracea HOM05D003188 ORTHO05D003602 4.9e-43 178.3 206 52.4
BraA10t42457Z Brassica rapa HOM05D003188 ORTHO05D000504 4.9e-43 178.3 206 52.4
AL1G12780 Arabidopsis lyrata HOM05D003188 ORTHO05D003602 1.1e-42 177.2 206 51.0
Hund13349 Selenicereus undatus HOM05D003188 ORTHO05D003602 1.1e-42 177.2 211 49.8
Lj2g0027481 Lotus japonicus HOM05D003188 ORTHO05D003602 2.4e-42 176.0 185 56.2
DCAR_011343 Daucus carota HOM05D003188 ORTHO05D003602 4.2e-42 175.3 211 50.7
BcaC05g24548 Brassica carinata HOM05D003188 ORTHO05D003602 5.5e-42 174.9 206 51.5
SGA_v2.0_scaffold159G37605 Striga asiatica HOM05D003188 ORTHO05D003602 7.1e-42 174.5 211 49.8
Sp1g02280 Schrenkiella parvula HOM05D003188 ORTHO05D003602 1.2e-41 173.7 206 51.9
Aa31LG1G9260 Aethionema arabicum HOM05D003188 ORTHO05D003602 1.6e-41 173.3 206 51.9
Migut.H01201 Erythranthe guttata HOM05D003188 ORTHO05D003602 2.7e-41 172.6 211 48.3
AT1G03280 Arabidopsis thaliana HOM05D003188 ORTHO05D003602 3.5e-41 172.2 206 51.0
ECA234G2517 Erigeron canadensis HOM05D003188 ORTHO05D003602 7.9e-41 171.0 211 47.4
Carub.0001s0239 Capsella rubella HOM05D003188 ORTHO05D003602 1.0e-40 170.6 206 50.0
Psat4g043680 Pisum sativum HOM05D003188 ORTHO05D003602 8.7e-40 167.5 213 47.9
Lsat_1_v5_gn_6_3380 Lactuca sativa HOM05D003188 ORTHO05D003602 5.6e-39 164.9 211 46.0
Mapoly0046s0071 Marchantia polymorpha HOM05D003188 ORTHO05D003602 1.3e-38 163.7 214 45.3
Aqoxy3G03899 Aquilegia oxysepala HOM05D003188 ORTHO05D003602 2.8e-38 162.5 210 47.6
Lj1g0006529 Lotus japonicus HOM05D003188 ORTHO05D003602 6.2e-38 161.4 131 64.1
RcHm_v2.0_Chr7g0184551 Rosa chinensis HOM05D003188 ORTHO05D003602 8.2e-38 161.0 210 45.7
arahy.Tifrunner.gnm1.ann1.8N8EX2 Arachis hypogaea HOM05D003188 ORTHO05D003602 1.1e-37 160.6 211 46.9
arahy.Tifrunner.gnm1.ann1.73QXIF Arachis hypogaea HOM05D003188 ORTHO05D003602 3.1e-37 159.1 211 46.4
Actinidia37847 Actinidia chinensis HOM05D003188 ORTHO05D003602 6.9e-37 157.9 210 44.8
Hund05006 Selenicereus undatus HOM05D003188 ORTHO05D003602 2.0e-36 156.4 211 46.0
CiPaw.12G051000 Carya illinoinensis HOM05D003188 ORTHO05D003602 1.3e-35 153.7 211 46.9
Thhalv10023437m.g Eutrema salsugineum HOM05D003188 ORTHO05D003602 1.3e-35 153.7 206 48.1
Os08g0343300 Oryza sativa ssp. japonica HOM05D003188 ORTHO05D003602 1.3e-35 153.7 211 44.1
AUR62023272 Chenopodium quinoa HOM05D003188 ORTHO05D003602 2.9e-35 152.5 210 43.8
TPR.G26763 Trifolium pratense HOM05D003188 ORTHO05D003602 3.8e-35 152.1 213 46.0
Rhsim09G0110400 Rhododendron simsii HOM05D003188 ORTHO05D003602 4.9e-35 151.8 213 43.7
Carub.0007s2083 Capsella rubella HOM05D003188 ORTHO05D003602 9.3e-34 147.5 146 57.5
AL7G33550 Arabidopsis lyrata HOM05D003188 ORTHO05D003602 1.6e-33 146.7 146 56.2
Oeu058326.2 Olea europaea HOM05D003188 ORTHO05D003602 4.6e-33 145.2 312 34.9
EL10Ac2g04540 Beta vulgaris HOM05D003188 ORTHO05D003602 7.9e-33 144.4 231 42.0
Carub.0007s2063 Capsella rubella HOM05D003188 ORTHO05D003602 7.9e-33 144.4 132 58.3
AT4G20340 Arabidopsis thaliana HOM05D003188 ORTHO05D003602 3.0e-32 142.5 146 55.5
FAN18G3545 Fragaria x ananassa HOM05D003188 ORTHO05D003602 3.0e-32 142.5 210 43.8
Migut.M00376 Erythranthe guttata HOM05D003188 ORTHO05D003602 6.7e-32 141.4 119 59.7
Zm00001eb028110 Zea mays HOM05D003188 ORTHO05D003602 8.7e-32 141.0 131 55.0
Ah.16g101610 Amaranthus hybridus HOM05D003188 ORTHO05D003602 4.3e-31 138.7 183 48.1
Pp3c27_3010 Physcomitrium patens HOM05D003188 ORTHO05D003602 2.2e-30 136.3 214 40.7
CARHR227350 Cardamine hirsuta HOM05D003188 ORTHO05D003602 8.2e-30 134.4 133 53.4
AUR62009031 Chenopodium quinoa HOM05D003188 ORTHO05D003602 1.4e-29 133.7 210 40.5
vmacro10787 Vaccinium macrocarpon HOM05D003188 ORTHO05D003602 1.7e-27 126.7 112 62.5
BcaC09g51427 Brassica carinata HOM05D003188 ORTHO05D003602 2.9e-27 125.9 131 55.0
C01p13220 Brassica napus HOM05D003188 ORTHO05D003602 2.9e-27 125.9 131 55.0
BraA01t01064Z Brassica rapa HOM05D003188 ORTHO05D003602 3.8e-27 125.6 131 52.7
Sp7g18890 Schrenkiella parvula HOM05D003188 ORTHO05D003602 1.4e-26 123.6 130 53.1
FAN13G2738 Fragaria x ananassa HOM05D003188 ORTHO05D003602 5.5e-26 121.7 117 54.7
A01p11180 Brassica napus HOM05D003188 ORTHO05D003602 7.2e-26 121.3 131 52.7
SMO196G0219 Selaginella moellendorffii HOM05D003188 ORTHO05D003602 2.1e-25 119.8 132 50.0
AagrBONN_evm.TU.Sc2ySwM_228.1658 Anthoceros agrestis HOM05D003188 ORTHO05D003602 2.7e-25 119.4 131 50.4
Dinv36902 Davidia involucrata HOM05D003188 ORTHO05D003602 2.7e-25 119.4 148 50.7
BolC1t01296H Brassica oleracea HOM05D003188 ORTHO05D003602 1.8e-24 116.7 132 52.3
Sed0006028 Sechium edule HOM05D003188 ORTHO05D003602 1.1e-23 114.0 90 61.1
Cpa.g.sc3890.1 Carica papaya HOM05D003188 ORTHO05D003602 1.5e-23 113.6 141 48.2
CSS0039000 Camellia sinensis var. sinensis HOM05D003188 ORTHO05D003602 9.7e-23 110.9 142 50.0
Cpa.g.sc13.60 Carica papaya HOM05D003188 ORTHO05D003602 9.7e-23 110.9 70 71.4
Lj9C432G3 Lonicera japonica HOM05D003188 ORTHO05D003602 9.7e-23 110.9 159 45.9
AL7G33340 Arabidopsis lyrata HOM05D003188 ORTHO05D003602 4.8e-22 108.6 99 61.6
PSO170G0558 Papaver somniferum HOM05D003188 ORTHO05D003602 4.8e-22 108.6 132 49.2
CSS0046008 Camellia sinensis var. sinensis HOM05D003188 ORTHO05D003602 4.1e-21 105.5 68 67.6
Thhalv10025149m.g Eutrema salsugineum HOM05D003188 ORTHO05D003602 9.1e-21 104.4 146 47.9
Atru.chr3.1254 Acer truncatum HOM05D003188 ORTHO05D003602 2.6e-20 102.8 75 66.7
RcHm_v2.0_Chr1g0365801 Rosa chinensis HOM05D003188 ORTHO05D003602 7.7e-20 101.3 100 53.0
arahy.Tifrunner.gnm1.ann1.Y7FW0X Arachis hypogaea HOM05D003188 ORTHO05D003602 1.0e-19 100.9 103 57.3
AT4G20810 Arabidopsis thaliana HOM05D003188 ORTHO05D003602 1.1e-18 97.4 116 47.4
FAN08G0088 Fragaria x ananassa HOM05D003188 ORTHO05D003602 1.9e-18 96.7 63 74.6
FAN03G2249 Fragaria x ananassa HOM05D003188 ORTHO05D003602 2.5e-18 96.3 100 49.0
FAN17G1577 Fragaria x ananassa HOM05D003188 ORTHO05D003602 2.5e-18 96.3 100 49.0
QL10p058686 Quercus lobata HOM05D003188 ORTHO05D003602 4.2e-18 95.5 134 46.3
FAN06G4431 Fragaria x ananassa HOM05D003188 ORTHO05D003602 2.7e-17 92.8 118 44.1
arahy.Tifrunner.gnm1.ann1.NH5Z51 Arachis hypogaea HOM05D003188 ORTHO05D003602 7.9e-17 91.3 133 45.1
FAN06G5104 Fragaria x ananassa HOM05D003188 ORTHO05D003602 7.9e-17 91.3 118 43.2
arahy.Tifrunner.gnm1.ann1.LTYE9H Arachis hypogaea HOM05D003188 ORTHO05D003602 1.0e-16 90.9 105 53.3
Gohir.A07G084627 Gossypium hirsutum HOM05D003188 ORTHO05D003602 1.4e-16 90.5 75 57.3
Atru.chr3.1253 Acer truncatum HOM05D003188 ORTHO05D003602 5.1e-16 88.6 140 45.0
FAN08G3676 Fragaria x ananassa HOM05D003188 ORTHO05D003602 8.8e-16 87.8 73 60.3
HPP92_015357 Vanilla planifolia HOM05D001092 ORTHO05D000923 1.7e-14 83.6 66 62.1
Gohir.A07G084654 Gossypium hirsutum HOM05D003188 ORTHO05D003602 1.5e-12 77.0 123 43.1
ATR0580G381 Amborella trichopoda HOM05D003188 ORTHO05D003602 2.0e-12 76.6 137 38.7
FAN04G1160 Fragaria x ananassa HOM05D003188 ORTHO05D003602 1.7e-11 73.6 161 36.0
FAN18G2667 Fragaria x ananassa HOM05D003188 ORTHO05D003602 6.5e-11 71.6 141 37.6
EL10Ac4g09232 Beta vulgaris HOM05D003188 ORTHO05D003602 2.0e-07 60.1 85 40.0
MCO04G055 Micromonas commoda HOM05D003188 ORTHO05D003602 3.3e-07 59.3 104 31.7
Zm00001eb223630 Zea mays HOM05D003188 ORTHO05D003602 3.3e-07 59.3 91 39.6
CBR_g8498 Chara braunii HOM05D003188 ORTHO05D003602 4.4e-07 58.9 36 75.0
Cc05_g04950 Coffea canephora HOM05D003188 ORTHO05D003602 1.3e-06 57.4 87 42.5


User provided reference genes

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