Gene: AT4G20340

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT4G20340
  • Transcript Identifier AT4G20340.1
  • Gene Type Coding gene
  • Location Chr4 : 10985011-10987748 : positive

Gene Family Information

  • ID HOM05D003188
  • #Genes/#Species 214/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT4G20340.1
  • uniprot F4JUV3

Descriptions

  • Description Transcription factor TFIIE, alpha subunit
  • Computational description Transcription factor TFIIE, alpha subunit; FUNCTIONS IN: RNA polymerase II transcription factor activity, transcription initiation factor activity; INVOLVED IN: transcription initiation from RNA polymerase II promoter; LOCATED IN: endomembrane system, transcription factor TFIIE complex; CONTAINS InterPro DOMAIN/s: Transcription factor TFIIE, alpha subunit (InterPro:IPR002853), Transcription factor TFE/TFIIEalpha, HTH domain (InterPro:IPR017919); BEST Arabidopsis thaliana protein match is: Transcription factor TFIIE, alpha subunit (TAIR:AT1G03280.1); Has 775 Blast hits to 709 proteins in 197 species: Archae - 3; Bacteria - 16; Metazoa - 261; Fungi - 178; Plants - 106; Viruses - 31; Other Eukaryotes - 180 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006367
IEA
Gene Ontologytranscription initiation from RNA polymerase II promoter
GO:0006367
IEA
InterProtranscription initiation from RNA polymerase II promoter
GO:0001113
IBA
Gene Ontologytranscription open complex formation at RNA polymerase II promoter1

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISM
Gene Ontologynucleus
GO:0005673
IBA
Gene Ontologytranscription factor TFIIE complex1

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR039997 Transcription factor E
IPR024550 TFIIEalpha/SarR/Rpc3 HTH domain
IPR013083 Zinc finger, RING/FYVE/PHD-type
IPR002853 Transcription initiation factor IIE subunit alpha, N-terminal
Mapman id Description
15.3.3.3.1 RNA biosynthesis.RNA polymerase II-dependent transcription.transcription initiation.TFIIe basal transcription factor heterodimer.subunit alpha