Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI18630 Sapria himalayana HOM05D003889 ORTHO05D004407 4.5e-112 407.9 204 100.0
Potri.018G036600 Populus trichocarpa HOM05D003889 ORTHO05D004407 3.1e-60 235.7 193 61.7
Haze_21830 Corylus avellana HOM05D003889 ORTHO05D004407 1.5e-59 233.4 193 61.7
CiPaw.07G208100 Carya illinoinensis HOM05D003889 ORTHO05D004407 2.0e-59 233.0 193 61.1
Nn8g39185 Nelumbo nucifera HOM05D003889 ORTHO05D004407 2.6e-59 232.6 193 62.2
Duzib150G0348 Durio zibethinus HOM05D003889 ORTHO05D004407 9.9e-59 230.7 198 59.6
TAR636G2480 Trochodendron aralioides HOM05D003889 ORTHO05D004407 9.9e-59 230.7 193 61.1
QL12p026194 Quercus lobata HOM05D003889 ORTHO05D004407 1.3e-58 230.3 194 60.8
CAN.G886.4 Capsicum annuum HOM05D003889 ORTHO05D004407 2.9e-58 229.2 193 59.6
Peaxi162Scf00105g00415 Petunia axillaris HOM05D003889 ORTHO05D004407 2.9e-58 229.2 193 59.6
Lalb_Chr24g0402631 Lupinus albus HOM05D003889 ORTHO05D004407 1.1e-57 227.3 193 60.6
Nitab4.5_0008974g0010 Nicotiana tabacum HOM05D003889 ORTHO05D004407 1.4e-57 226.9 193 59.6
CSS0006872 Camellia sinensis var. sinensis HOM05D003889 ORTHO05D004407 1.9e-57 226.5 193 60.6
VMungo0647G1905 Vigna mungo HOM05D003889 ORTHO05D004407 1.9e-57 226.5 193 59.6
Gohir.A13G185900 Gossypium hirsutum HOM05D003889 ORTHO05D004407 2.4e-57 226.1 193 59.1
Ca_12818_v3 Cicer arietinum L. HOM05D003889 ORTHO05D004407 3.2e-57 225.7 193 60.1
PSO198G0085 Papaver somniferum HOM05D003889 ORTHO05D004407 3.2e-57 225.7 193 60.6
Glyma.14G140800 Glycine max HOM05D003889 ORTHO05D004407 4.2e-57 225.3 200 59.0
TWI34G0995 Tripterygium wilfordii HOM05D003889 ORTHO05D004407 4.2e-57 225.3 193 59.6
Manes.03G066340 Manihot esculenta HOM05D003889 ORTHO05D004407 5.5e-57 224.9 193 61.1
Aqoxy7G01675 Aquilegia oxysepala HOM05D003889 ORTHO05D004407 7.1e-57 224.6 193 60.1
Eucgr.C02886 Eucalyptus grandis HOM05D003889 ORTHO05D004407 7.1e-57 224.6 193 60.6
Medtr1g008600 Medicago truncatula HOM05D003889 ORTHO05D004407 9.3e-57 224.2 193 59.1
Cpa.g.sc205.2 Carica papaya HOM05D003889 ORTHO05D004407 1.2e-56 223.8 193 60.1
TPR.G12075 Trifolium pratense HOM05D003889 ORTHO05D004407 1.2e-56 223.8 193 59.1
ClCG08G012400 Citrullus lanatus HOM05D003889 ORTHO05D004407 1.6e-56 223.4 193 60.6
PSO782G2669 Papaver somniferum HOM05D003889 ORTHO05D004407 1.6e-56 223.4 193 60.1
Solyc08g068120.3 Solanum lycopersicum HOM05D003889 ORTHO05D004407 1.6e-56 223.4 193 58.0
Sopen08g021990 Solanum pennellii HOM05D003889 ORTHO05D004407 1.6e-56 223.4 193 58.0
MBI04_g19381_MAGBIO Magnolia biondii HOM05D003889 ORTHO05D004407 2.1e-56 223.0 193 58.5
Psat6g033880 Pisum sativum HOM05D003889 ORTHO05D004407 2.1e-56 223.0 193 59.1
Sed0021057 Sechium edule HOM05D003889 ORTHO05D004407 2.1e-56 223.0 195 59.0
EL10Ac2g04091 Beta vulgaris HOM05D003889 ORTHO05D004407 3.5e-56 222.2 193 59.6
Phvul.008G158500 Phaseolus vulgaris HOM05D003889 ORTHO05D004407 3.5e-56 222.2 193 59.6
Thecc.09G038600 Theobroma cacao HOM05D003889 ORTHO05D004407 3.5e-56 222.2 193 58.5
Ah.10g035410 Amaranthus hybridus HOM05D003889 ORTHO05D004407 6.0e-56 221.5 193 58.0
Lj1g0022555 Lotus japonicus HOM05D003889 ORTHO05D004407 6.0e-56 221.5 193 59.1
AUR62023039 Chenopodium quinoa HOM05D003889 ORTHO05D004407 7.9e-56 221.1 193 59.1
FAN20G0810 Fragaria x ananassa HOM05D003889 ORTHO05D004407 1.0e-55 220.7 193 60.6
Gorai.013G218600 Gossypium raimondii HOM05D003889 ORTHO05D004407 1.0e-55 220.7 193 57.5
MELO3C011159.2 Cucumis melo HOM05D003889 ORTHO05D004407 1.3e-55 220.3 193 60.1
Gohir.D13G192600 Gossypium hirsutum HOM05D003889 ORTHO05D004407 1.8e-55 219.9 193 57.5
COL.COLO4_18706 Corchorus olitorius HOM05D003889 ORTHO05D004407 2.3e-55 219.5 193 57.5
MD08G1120000 Malus domestica HOM05D003889 ORTHO05D004407 2.3e-55 219.5 193 58.5
FvH4_2g36240 Fragaria vesca HOM05D003889 ORTHO05D004407 3.0e-55 219.2 193 59.1
CsaV3_2G031090 Cucumis sativus L. HOM05D003889 ORTHO05D004407 5.1e-55 218.4 193 60.1
AUR62009357 Chenopodium quinoa HOM05D003889 ORTHO05D004407 6.7e-55 218.0 193 58.5
Dinv30246 Davidia involucrata HOM05D003889 ORTHO05D004407 6.7e-55 218.0 193 58.5
Prupe.1G453900 Prunus persica HOM05D003889 ORTHO05D004407 6.7e-55 218.0 193 58.0
HanXRQChr14g0435171 Helianthus annuus HOM05D003889 ORTHO05D004407 8.7e-55 217.6 193 57.5
FAN27G2633 Fragaria x ananassa HOM05D003889 ORTHO05D004407 1.1e-54 217.2 193 58.0
SGA_v2.0_scaffold243G44298 Striga asiatica HOM05D003889 ORTHO05D004407 1.5e-54 216.9 193 58.0
Os12g0291000 Oryza sativa ssp. japonica HOM05D003889 ORTHO05D004407 2.5e-54 216.1 193 58.0
DCAR_000737 Daucus carota HOM05D003889 ORTHO05D004407 3.3e-54 215.7 193 57.0
Actinidia13307 Actinidia chinensis HOM05D003889 ORTHO05D004407 4.3e-54 215.3 193 58.5
GSVIVG01035684001 Vitis vinifera HOM05D003889 ORTHO05D004407 4.3e-54 215.3 193 58.0
Aa31LG2G16920 Aethionema arabicum HOM05D003889 ORTHO05D004407 5.6e-54 214.9 193 56.5
THA.LOC104818599 Tarenaya hassleriana HOM05D003889 ORTHO05D004407 5.6e-54 214.9 193 56.0
FAN15G2018 Fragaria x ananassa HOM05D003889 ORTHO05D004407 7.4e-54 214.5 193 58.0
A08p18050 Brassica napus HOM05D003889 ORTHO05D004407 9.6e-54 214.2 193 55.4
Rhsim02G0183600 Rhododendron simsii HOM05D003889 ORTHO05D004407 9.6e-54 214.2 193 58.0
RcHm_v2.0_Chr6g0305641 Rosa chinensis HOM05D003889 ORTHO05D004407 9.6e-54 214.2 193 58.0
BraA08t33755Z Brassica rapa HOM05D003889 ORTHO05D004407 1.3e-53 213.8 193 54.9
Lsat_1_v5_gn_6_11181 Lactuca sativa HOM05D003889 ORTHO05D004407 1.3e-53 213.8 193 56.5
AT4G32700 Arabidopsis thaliana HOM05D003889 ORTHO05D004407 1.6e-53 213.4 193 54.9
ECA233G2562 Erigeron canadensis HOM05D003889 ORTHO05D004407 1.6e-53 213.4 193 56.5
PGR044G0516 Punica granatum HOM05D003889 ORTHO05D004407 1.6e-53 213.4 193 56.5
BcaC09g52063 Brassica carinata HOM05D003889 ORTHO05D004407 2.1e-53 213.0 193 54.9
A01p05650 Brassica napus HOM05D003889 ORTHO05D004407 2.8e-53 212.6 193 55.4
C03p87160 Brassica napus HOM05D003889 ORTHO05D004407 3.7e-53 212.2 193 54.9
BolC3t21018H Brassica oleracea HOM05D003889 ORTHO05D004407 3.7e-53 212.2 193 54.9
Oeu018088.1 Olea europaea HOM05D003889 ORTHO05D004407 4.8e-53 211.8 193 56.5
Oeu031571.1 Olea europaea HOM05D003889 ORTHO05D004407 4.8e-53 211.8 193 56.5
Hund03446 Selenicereus undatus HOM05D003889 ORTHO05D004407 4.8e-53 211.8 191 56.5
C01p06220 Brassica napus HOM05D003889 ORTHO05D004407 6.2e-53 211.5 193 54.9
BraA01t00535Z Brassica rapa HOM05D003889 ORTHO05D004407 6.2e-53 211.5 193 54.9
Cc08_g08480 Coffea canephora HOM05D003889 ORTHO05D004407 6.2e-53 211.5 193 56.0
Thhalv10024191m.g Eutrema salsugineum HOM05D003889 ORTHO05D004407 6.2e-53 211.5 193 54.4
Sp7g30460 Schrenkiella parvula HOM05D003889 ORTHO05D004407 6.2e-53 211.5 193 54.4
Carub.0007s0783 Capsella rubella HOM05D003889 ORTHO05D004407 1.4e-52 210.3 193 53.4
ATR0916G001 Amborella trichopoda HOM05D003889 ORTHO05D004407 3.1e-52 209.1 193 57.0
SalBow4G0524 Salvia bowleyana HOM05D003889 ORTHO05D004407 3.1e-52 209.1 193 55.4
CARHR240680 Cardamine hirsuta HOM05D003889 ORTHO05D004407 4.0e-52 208.8 193 53.9
AL7G19040 Arabidopsis lyrata HOM05D003889 ORTHO05D004407 5.3e-52 208.4 193 53.9
Migut.A00236 Erythranthe guttata HOM05D003889 ORTHO05D004407 2.0e-51 206.5 193 55.4
Zm00001eb409880 Zea mays HOM05D003889 ORTHO05D004407 7.6e-51 204.5 193 53.9
Lj7C708G10 Lonicera japonica HOM05D003889 ORTHO05D004407 1.3e-50 203.8 179 58.1
Sc23g0005860 Simmondsia chinensis HOM05D003889 ORTHO05D004407 4.9e-50 201.8 193 54.9
BcaB03g12757 Brassica carinata HOM05D003889 ORTHO05D004407 5.7e-46 188.3 193 52.3
Nitab4.5_0000250g0220 Nicotiana tabacum HOM05D003889 ORTHO05D004407 2.1e-45 186.4 119 72.3
HPP92_002908 Vanilla planifolia HOM05D003889 ORTHO05D004407 2.1e-45 186.4 193 51.8
arahy.Tifrunner.gnm1.ann1.NKLE2F Arachis hypogaea HOM05D003889 ORTHO05D004407 3.4e-43 179.1 119 69.7
arahy.Tifrunner.gnm1.ann1.D2VLN9 Arachis hypogaea HOM05D003889 ORTHO05D004407 7.6e-43 177.9 119 68.9
Atru.chr7.2176 Acer truncatum HOM05D003889 ORTHO05D004407 5.0e-42 175.3 120 65.8
AagrBONN_evm.TU.Sc2ySwM_117.2429 Anthoceros agrestis HOM05D003889 ORTHO05D004407 8.5e-42 174.5 193 47.2
Mapoly0097s0045 Marchantia polymorpha HOM05D003889 ORTHO05D004407 1.1e-41 174.1 193 45.6
Pp3c5_12930 Physcomitrium patens HOM05D003889 ORTHO05D004407 9.3e-41 171.0 193 47.7
RhsimUnG0237900 Rhododendron simsii HOM05D003889 ORTHO05D004407 1.1e-38 164.1 120 65.8
SEGI_21359 Sequoiadendron giganteum HOM05D003889 ORTHO05D004407 1.5e-38 163.7 132 61.4
Rhsim01G0105400 Rhododendron simsii HOM05D003889 ORTHO05D004407 7.4e-38 161.4 120 65.0
Rhsim01G0106100 Rhododendron simsii HOM05D003889 ORTHO05D004407 9.7e-38 161.0 121 62.8
Rhsim01G0104800 Rhododendron simsii HOM05D003889 ORTHO05D004407 2.2e-37 159.8 119 64.7
CBR_g1000 Chara braunii HOM05D003889 ORTHO05D000353 2.8e-37 159.5 191 45.5
Lsat_1_v5_gn_4_168341 Lactuca sativa HOM05D003889 ORTHO05D004407 3.1e-36 156.0 112 64.3
unitig_37.g12219 Utricularia gibba HOM05D003889 ORTHO05D004407 1.2e-35 154.1 119 61.3
Rhsim01G0105200 Rhododendron simsii HOM05D003889 ORTHO05D004407 6.7e-31 138.3 115 60.9
Lsat_1_v5_gn_5_11300 Lactuca sativa HOM05D003889 ORTHO05D004407 1.7e-29 133.7 108 58.3
Lsat_1_v5_gn_9_62720 Lactuca sativa HOM05D003889 ORTHO05D004407 3.7e-29 132.5 101 60.4
Lsat_1_v5_gn_6_18580 Lactuca sativa HOM05D003889 ORTHO05D004407 4.8e-29 132.1 94 63.8
Cre16.g664301 Chlamydomonas reinhardtii HOM05D003889 ORTHO05D004407 1.9e-25 120.2 194 37.1
Ciclev10007228m.g Citrus clementina HOM05D003889 ORTHO05D004407 2.0e-19 100.1 108 52.8
MCO12G059 Micromonas commoda HOM05D003889 ORTHO05D004407 7.7e-19 98.2 193 36.3
Lsat_1_v5_gn_7_62921 Lactuca sativa HOM05D003889 ORTHO05D004407 7.2e-17 91.7 112 46.4
Cre06.g257800 Chlamydomonas reinhardtii HOM05D003889 ORTHO05D004407 1.6e-16 90.5 194 33.5
MCO01G257 Micromonas commoda HOM05D003889 ORTHO05D004407 4.7e-16 89.0 210 30.0
EL10Ac9g22330 Beta vulgaris HOM05D003889 ORTHO05D010903 1.8e-15 87.0 70 64.3
EL10Ac9g21162 Beta vulgaris HOM05D013081 ORTHO05D010903 3.0e-15 86.3 55 74.5
EL10Ac3g06398 Beta vulgaris HOM05D003889 ORTHO05D010903 4.0e-15 85.9 55 74.5
Cre17.g736150 Chlamydomonas reinhardtii HOM05D003889 ORTHO05D004407 4.5e-11 72.4 98 35.7
SEGI_02430 Sequoiadendron giganteum HOM05D003889 ORTHO05D004407 2.3e-07 60.1 45 66.7
Rhsim01G0105100 Rhododendron simsii HOM05D002735 ORTHO05D004407 8.8e-07 58.2 45 62.2


User provided reference genes

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