Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI18110 Sapria himalayana HOM05D000246 ORTHO05D007179 1.1e-84 316.6 159 100.0
Manes.08G118800 Manihot esculenta HOM05D000246 ORTHO05D007179 1.1e-25 120.6 171 41.5
Gohir.A11G267000 Gossypium hirsutum HOM05D000246 ORTHO05D007179 3.6e-24 115.5 151 49.7
Gorai.007G299200 Gossypium raimondii HOM05D000246 ORTHO05D007179 6.2e-24 114.8 151 49.7
Duzib177G0836 Durio zibethinus HOM05D000246 ORTHO05D007179 5.2e-23 111.7 170 44.7
Gohir.D11G277100 Gossypium hirsutum HOM05D000246 ORTHO05D007179 1.5e-22 110.2 151 47.7
Haze_04155 Corylus avellana HOM05D000246 ORTHO05D007179 1.3e-21 107.1 129 44.2
Atru.chr2.19 Acer truncatum HOM05D000246 ORTHO05D007179 2.9e-21 105.9 187 40.1
Sabra05G0031700 Salix brachista HOM05D000359 ORTHO05D007179 4.9e-21 105.1 151 44.4
CiPaw.08G162700 Carya illinoinensis HOM05D000246 ORTHO05D007179 8.4e-21 104.4 177 40.7
Cfa006619 Carpinus fangiana HOM05D000246 ORTHO05D007179 1.1e-20 104.0 142 42.3
vmacro04965 Vaccinium macrocarpon HOM05D000246 ORTHO05D007179 1.4e-20 103.6 183 38.3
Thecc.05G311900 Theobroma cacao HOM05D000246 ORTHO05D007179 7.1e-20 101.3 166 40.4
TWI56G0873 Tripterygium wilfordii HOM05D000246 ORTHO05D007179 9.3e-20 100.9 124 46.8
Lsat_1_v5_gn_9_123801 Lactuca sativa HOM05D000246 ORTHO05D007179 2.1e-19 99.8 119 47.1
FAN05G3600 Fragaria x ananassa HOM05D000246 ORTHO05D007179 3.5e-19 99.0 97 49.5
FAN14G0626 Fragaria x ananassa HOM05D000246 ORTHO05D007179 3.5e-19 99.0 97 49.5
FAN02G0914 Fragaria x ananassa HOM05D000246 ORTHO05D007179 4.6e-19 98.6 97 49.5
PGR031G3950 Punica granatum HOM05D000246 ORTHO05D007179 4.6e-19 98.6 176 35.2
RcHm_v2.0_Chr3g0455521 Rosa chinensis HOM05D000246 ORTHO05D007179 4.6e-19 98.6 97 49.5
TAR633G0108 Trochodendron aralioides HOM05D000246 ORTHO05D007179 4.6e-19 98.6 169 39.1
QL03p021621 Quercus lobata HOM05D000246 ORTHO05D007179 7.8e-19 97.8 94 52.1
QL03p021635 Quercus lobata HOM05D000246 ORTHO05D007179 7.8e-19 97.8 94 52.1
arahy.Tifrunner.gnm1.ann1.JYY4I0 Arachis hypogaea HOM05D000246 ORTHO05D007179 1.0e-18 97.4 123 42.3
arahy.Tifrunner.gnm1.ann1.K95L4M Arachis hypogaea HOM05D000246 ORTHO05D007179 1.0e-18 97.4 123 42.3
ECA240G0991 Erigeron canadensis HOM05D000246 ORTHO05D007179 1.3e-18 97.1 118 45.8
Eucgr.L01168 Eucalyptus grandis HOM05D000246 ORTHO05D007179 1.7e-18 96.7 115 48.7
FvH4_6g06440 Fragaria vesca HOM05D000246 ORTHO05D007179 3.0e-18 95.9 97 48.5
Potri.005G026400 Populus trichocarpa HOM05D000246 ORTHO05D007179 3.9e-18 95.5 164 39.0
MD04G1201600 Malus domestica HOM05D000246 ORTHO05D007179 5.1e-18 95.1 123 43.1
ClCG02G015470 Citrullus lanatus HOM05D000246 ORTHO05D007179 6.6e-18 94.7 131 42.0
Rhsim07G0187000 Rhododendron simsii HOM05D000246 ORTHO05D007179 6.6e-18 94.7 109 49.5
GSVIVG01031124001 Vitis vinifera HOM05D001472 ORTHO05D002655 6.6e-18 94.7 121 43.8
Aa31LG11G9420 Aethionema arabicum HOM05D000246 ORTHO05D007179 8.7e-18 94.4 99 46.5
CSS0043712 Camellia sinensis var. sinensis HOM05D000246 ORTHO05D007179 8.7e-18 94.4 118 43.2
Dinv40318 Davidia involucrata HOM05D000246 ORTHO05D007179 8.7e-18 94.4 104 51.9
CANSAT54G2417 Cannabis sativa HOM05D000246 ORTHO05D007179 1.5e-17 93.6 120 45.0
arahy.Tifrunner.gnm1.ann1.G0LK44 Arachis hypogaea HOM05D000246 ORTHO05D007179 2.5e-17 92.8 128 43.0
Prupe.6G321800 Prunus persica HOM05D000246 ORTHO05D007179 2.5e-17 92.8 134 41.8
CDE01G0473 Ceratophyllum demersum HOM05D000246 ORTHO05D007179 3.3e-17 92.4 111 51.4
CSS0044658 Camellia sinensis var. sinensis HOM05D000246 ORTHO05D007179 5.6e-17 91.7 71 59.2
Migut.B01029 Erythranthe guttata HOM05D000246 ORTHO05D007179 5.6e-17 91.7 119 44.5
Oeu012115.1 Olea europaea HOM05D000246 ORTHO05D007179 7.3e-17 91.3 82 51.2
Ciclev10000234m.g Citrus clementina HOM05D000246 ORTHO05D007179 9.6e-17 90.9 124 41.9
CsaV3_2G006600 Cucumis sativus L. HOM05D000246 ORTHO05D007179 1.3e-16 90.5 162 36.4
Lj5A431G15 Lonicera japonica HOM05D000246 ORTHO05D007179 1.6e-16 90.1 188 34.6
Actinidia05681 Actinidia chinensis HOM05D000246 ORTHO05D007179 2.1e-16 89.7 136 38.2
Aqoxy2G02800 Aquilegia oxysepala HOM05D000246 ORTHO05D007179 2.8e-16 89.4 70 61.4
Cc00_g10440 Coffea canephora HOM05D000246 ORTHO05D007179 2.8e-16 89.4 122 44.3
Lalb_Chr21g0310621 Lupinus albus HOM05D000246 ORTHO05D007179 3.6e-16 89.0 127 40.2
Nitab4.5_0008329g0030 Nicotiana tabacum HOM05D000246 ORTHO05D007179 3.6e-16 89.0 122 37.7
Sp2g20840 Schrenkiella parvula HOM05D000246 ORTHO05D007179 3.6e-16 89.0 77 58.4
A06p37370 Brassica napus HOM05D000246 ORTHO05D007179 4.8e-16 88.6 154 39.0
FvH4_6g06441 Fragaria vesca HOM05D000246 ORTHO05D007179 4.8e-16 88.6 125 42.4
Lj5A421T62 Lonicera japonica HOM05D000246 ORTHO05D007179 4.8e-16 88.6 157 38.2
Nn3g21421 Nelumbo nucifera HOM05D000246 ORTHO05D007179 4.8e-16 88.6 102 51.0
C07p41090 Brassica napus HOM05D000246 ORTHO05D007179 6.2e-16 88.2 84 56.0
BolC7t44636H Brassica oleracea HOM05D000246 ORTHO05D007179 6.2e-16 88.2 84 56.0
COL.COLO4_10505 Corchorus olitorius HOM05D000246 ORTHO05D007179 6.2e-16 88.2 186 36.6
Nitab4.5_0002344g0100 Nicotiana tabacum HOM05D000246 ORTHO05D007179 6.2e-16 88.2 122 39.3
Sed0014533 Sechium edule HOM05D000246 ORTHO05D007179 6.2e-16 88.2 123 42.3
BraA06t26661Z Brassica rapa HOM05D000246 ORTHO05D007179 8.1e-16 87.8 84 56.0
CAN.G1652.4 Capsicum annuum HOM05D000246 ORTHO05D007179 1.4e-15 87.0 119 38.7
AUR62000778 Chenopodium quinoa HOM05D000246 ORTHO05D007179 3.1e-15 85.9 102 46.1
HanXRQChr03g0072511 Helianthus annuus HOM05D000246 ORTHO05D007179 3.1e-15 85.9 120 41.7
MBI19_g18874_MAGBIO Magnolia biondii HOM05D000246 ORTHO05D007179 3.1e-15 85.9 104 46.2
AL6G39350 Arabidopsis lyrata HOM05D000246 ORTHO05D007179 4.0e-15 85.5 62 66.1
Ca_10124_v3 Cicer arietinum L. HOM05D000246 ORTHO05D007179 4.0e-15 85.5 124 37.9
Psat6g150320 Pisum sativum HOM05D000246 ORTHO05D007179 5.3e-15 85.1 125 40.8
MELO3C004226.2 Cucumis melo HOM05D000246 ORTHO05D007179 6.9e-15 84.7 122 43.4
AT5G27680 Arabidopsis thaliana HOM05D000246 ORTHO05D007179 9.0e-15 84.3 62 64.5
Hund21703 Selenicereus undatus HOM05D000246 ORTHO05D007179 9.0e-15 84.3 149 37.6
Sopen01g043000 Solanum pennellii HOM05D000246 ORTHO05D007179 9.0e-15 84.3 118 39.0
AUR62005191 Chenopodium quinoa HOM05D000246 ORTHO05D007179 1.2e-14 84.0 120 40.8
Thhalv10003644m.g Eutrema salsugineum HOM05D000246 ORTHO05D007179 1.2e-14 84.0 79 53.2
Aqoxy2G03005 Aquilegia oxysepala HOM05D000246 ORTHO05D007179 1.5e-14 83.6 101 49.5
Glyma.20G236000 Glycine max HOM05D000246 ORTHO05D007179 1.5e-14 83.6 127 36.2
FAN05G4756 Fragaria x ananassa HOM05D000246 ORTHO05D007179 2.0e-14 83.2 127 40.9
Solyc01g099470.3 Solanum lycopersicum HOM05D000246 ORTHO05D007179 2.6e-14 82.8 98 44.9
TPR.G6096 Trifolium pratense HOM05D000246 ORTHO05D007179 2.6e-14 82.8 129 38.0
Cpa.g.sc48.83 Carica papaya HOM05D000246 ORTHO05D007179 3.4e-14 82.4 86 53.5
Phvul.007G196600 Phaseolus vulgaris HOM05D000246 ORTHO05D007179 7.6e-14 81.3 126 38.9
Carub.0006s2490 Capsella rubella HOM05D000246 ORTHO05D007179 1.3e-13 80.5 64 57.8
CARHR186200 Cardamine hirsuta HOM05D000246 ORTHO05D007179 2.2e-13 79.7 62 61.3
Lj5g0018456 Lotus japonicus HOM05D000246 ORTHO05D007179 2.9e-13 79.3 110 43.6
ATR0210G017 Amborella trichopoda HOM05D000246 ORTHO05D007179 3.8e-13 79.0 103 45.6
PSO170G0679 Papaver somniferum HOM05D000246 ORTHO05D007179 8.4e-13 77.8 122 40.2
EL10Ac4g09931 Beta vulgaris HOM05D000246 ORTHO05D007179 1.1e-12 77.4 98 46.9
Peaxi162Scf00037g00932 Petunia axillaris HOM05D000246 ORTHO05D007179 1.1e-12 77.4 102 44.1
DCAR_003348 Daucus carota HOM05D000246 ORTHO05D007179 1.4e-12 77.0 58 58.6
Medtr1g083250 Medicago truncatula HOM05D000246 ORTHO05D007179 5.4e-12 75.1 123 36.6
HPP92_010691 Vanilla planifolia HOM05D000246 ORTHO05D007179 1.2e-11 73.9 101 42.6
Zm00001eb354210 Zea mays HOM05D000246 ORTHO05D007179 7.9e-11 71.2 114 37.7
PSO210G2254 Papaver somniferum HOM05D000246 ORTHO05D007179 1.3e-10 70.5 122 39.3
Solyc02g088430.1 Solanum lycopersicum HOM05D000246 ORTHO05D007179 1.5e-09 67.0 77 40.3
VMungo0720G1388 Vigna mungo HOM05D000246 ORTHO05D007179 4.3e-09 65.5 122 36.1
BcaNung04538 Brassica carinata HOM05D005214 ORTHO05D005861 5.3e-07 58.5 51 56.9
SEGI_40367 Sequoiadendron giganteum HOM05D000246 ORTHO05D007179 5.3e-07 58.5 106 42.5
C07p40980 Brassica napus HOM05D008896 ORTHO05D011108 3.4e-06 55.8 48 58.3


User provided reference genes

Program Settings