Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI17545 Sapria himalayana HOM05D006564 ORTHO05D007772 3.4e-155 551.6 275 100.0
Thecc.02G252200 Theobroma cacao HOM05D006564 ORTHO05D007772 5.9e-30 135.6 108 63.9
Gorai.010G099700 Gossypium raimondii HOM05D006564 ORTHO05D007772 9.4e-28 128.3 108 59.3
Gohir.A06G086900 Gossypium hirsutum HOM05D006564 ORTHO05D007772 1.2e-27 127.9 108 59.3
QL03p059806 Quercus lobata HOM05D006564 ORTHO05D007772 3.6e-27 126.3 107 61.7
Gohir.D06G086400 Gossypium hirsutum HOM05D006564 ORTHO05D007772 4.6e-27 125.9 108 58.3
CiPaw.05G152600 Carya illinoinensis HOM05D006564 ORTHO05D007772 1.5e-25 120.9 108 58.3
Potri.010G041900 Populus trichocarpa HOM05D006564 ORTHO05D007772 5.7e-25 119.0 108 53.7
Sed0020482 Sechium edule HOM05D006564 ORTHO05D007772 2.2e-24 117.1 108 53.7
SHI32537 Sapria himalayana HOM05D000105 ORTHO05D003975 3.7e-24 116.3 78 82.1
RcHm_v2.0_Chr4g0443691 Rosa chinensis HOM05D006564 ORTHO05D007772 2.4e-23 113.6 108 54.6
Actinidia01701 Actinidia chinensis HOM05D006564 ORTHO05D007772 3.1e-23 113.2 115 53.0
TAR622G0653 Trochodendron aralioides HOM05D006564 ORTHO05D007772 3.1e-23 113.2 108 51.9
FvH4_4g34230 Fragaria vesca HOM05D006564 ORTHO05D007772 1.2e-22 111.3 108 50.9
Cpa.g.sc69.59 Carica papaya HOM05D006564 ORTHO05D007772 5.9e-22 109.0 108 50.0
FAN17G1546 Fragaria x ananassa HOM05D006564 ORTHO05D007772 1.7e-21 107.5 108 50.0
Dinv24837 Davidia involucrata HOM05D006564 ORTHO05D007772 8.5e-21 105.1 107 49.5
FAN07G0775 Fragaria x ananassa HOM05D006564 ORTHO05D007772 8.5e-21 105.1 108 49.1
Nn3g16844 Nelumbo nucifera HOM05D006564 ORTHO05D007772 1.4e-20 104.4 108 50.9
Aqoxy3G02914 Aquilegia oxysepala HOM05D006564 ORTHO05D007772 2.1e-19 100.5 109 45.0
Hma1.2p1_0536F.1_g173940 Hydrangea macrophylla HOM05D006564 ORTHO05D007772 7.9e-19 98.6 123 43.1
PGR119G0202 Punica granatum HOM05D006564 ORTHO05D007772 7.9e-19 98.6 107 48.6
GSVIVG01013762001 Vitis vinifera HOM05D006564 ORTHO05D007772 2.3e-18 97.1 119 44.5
MD16G1094900 Malus domestica HOM05D006564 ORTHO05D007772 6.7e-18 95.5 108 50.0
CANSAT01G1831 Cannabis sativa HOM05D006564 ORTHO05D007772 1.1e-17 94.7 108 47.2
Ciclev10033458m.g Citrus clementina HOM05D006564 ORTHO05D007772 2.0e-17 94.0 108 47.2
arahy.Tifrunner.gnm1.ann1.FI0FWQ Arachis hypogaea HOM05D006564 ORTHO05D007772 3.3e-17 93.2 107 43.0
arahy.Tifrunner.gnm1.ann1.T8BVJ1 Arachis hypogaea HOM05D006564 ORTHO05D007772 3.3e-17 93.2 107 43.0
COL.COLO4_24191 Corchorus olitorius HOM05D006564 ORTHO05D007772 5.7e-17 92.4 87 56.3
Psat2g104680 Pisum sativum HOM05D006564 ORTHO05D007772 5.7e-17 92.4 127 39.4
Prupe.1G251700 Prunus persica HOM05D006564 ORTHO05D007772 5.7e-17 92.4 107 46.7
Lj2g0026051 Lotus japonicus HOM05D006564 ORTHO05D007772 7.4e-17 92.0 107 43.9
SHI24241 Sapria himalayana HOM05D007305 ORTHO05D003975 1.7e-16 90.9 107 57.0
SHI08195 Sapria himalayana HOM05D007305 ORTHO05D003975 2.2e-16 90.5 97 57.7
Glyma.01G029900 Glycine max HOM05D006564 ORTHO05D007772 2.8e-16 90.1 107 42.1
TPR.G21085 Trifolium pratense HOM05D006564 ORTHO05D007772 2.8e-16 90.1 123 42.3
Medtr5g034180 Medicago truncatula HOM05D006564 ORTHO05D007772 3.7e-16 89.7 107 42.1
SHI09067 Sapria himalayana HOM05D007305 ORTHO05D003975 6.3e-16 89.0 133 45.9
SHI13420 Sapria himalayana HOM05D007305 ORTHO05D003975 8.2e-16 88.6 48 91.7
SHI14995 Sapria himalayana HOM05D007305 ORTHO05D009886 8.2e-16 88.6 76 61.8
Sp2g04270 Schrenkiella parvula HOM05D006564 ORTHO05D007772 1.1e-15 88.2 109 45.0
THA.LOC104827560 Tarenaya hassleriana HOM05D006564 ORTHO05D007772 1.4e-15 87.8 129 43.4
PSO832G2728 Papaver somniferum HOM05D006564 ORTHO05D007772 1.8e-15 87.4 108 42.6
AT1G60460 Arabidopsis thaliana HOM05D006564 ORTHO05D007772 2.4e-15 87.0 108 46.3
AUR62005394 Chenopodium quinoa HOM05D006564 ORTHO05D007772 2.4e-15 87.0 144 36.8
AL2G16230 Arabidopsis lyrata HOM05D006564 ORTHO05D007772 3.1e-15 86.7 108 46.3
Thhalv10023451m.g Eutrema salsugineum HOM05D006564 ORTHO05D007772 3.1e-15 86.7 110 44.5
SHI29161 Sapria himalayana HOM05D000002 ORTHO05D000001 4.1e-15 86.3 65 69.2
SHI32516 Sapria himalayana HOM05D000023 ORTHO05D000014 4.1e-15 86.3 77 63.6
SHI04012 Sapria himalayana HOM05D000105 ORTHO05D003975 5.3e-15 85.9 45 93.3
SHI04758 Sapria himalayana HOM05D007305 ORTHO05D003975 5.3e-15 85.9 45 93.3
SHI07315 Sapria himalayana HOM05D007305 ORTHO05D003975 5.3e-15 85.9 86 58.1
SHI08645 Sapria himalayana HOM05D007305 ORTHO05D003975 5.3e-15 85.9 45 93.3
SHI15399 Sapria himalayana HOM05D001484 ORTHO05D003975 5.3e-15 85.9 45 93.3
SHI15904 Sapria himalayana HOM05D000024 ORTHO05D000007 5.3e-15 85.9 45 93.3
SHI17043 Sapria himalayana HOM05D004647 ORTHO05D005349 5.3e-15 85.9 45 93.3
SHI20280 Sapria himalayana HOM05D006954 ORTHO05D008729 5.3e-15 85.9 45 93.3
SHI21396 Sapria himalayana HOM05D000002 ORTHO05D009653 5.3e-15 85.9 45 93.3
SHI21687 Sapria himalayana HOM05D007305 ORTHO05D003975 5.3e-15 85.9 45 93.3
SHI22767 Sapria himalayana HOM05D004573 ORTHO05D003975 5.3e-15 85.9 45 93.3
SHI23199 Sapria himalayana HOM05D007305 ORTHO05D003975 5.3e-15 85.9 45 93.3
SHI30681 Sapria himalayana HOM05D000002 ORTHO05D000001 5.3e-15 85.9 45 93.3
SHI50806 Sapria himalayana HOM05D002447 ORTHO05D001298 5.3e-15 85.9 45 93.3
SHI18999 Sapria himalayana HOM05D007305 ORTHO05D003975 7.0e-15 85.5 45 91.1
A01p29270 Brassica napus HOM05D006564 ORTHO05D007772 9.1e-15 85.1 110 45.5
Carub.0002s0487 Capsella rubella HOM05D006564 ORTHO05D007772 9.1e-15 85.1 110 46.4
AUR62014056 Chenopodium quinoa HOM05D006564 ORTHO05D007772 9.1e-15 85.1 139 38.1
Peaxi162Scf00075g02124 Petunia axillaris HOM05D006564 ORTHO05D007772 9.1e-15 85.1 106 41.5
SHI17549 Sapria himalayana HOM05D007305 ORTHO05D003975 9.1e-15 85.1 45 93.3
SHI27666 Sapria himalayana HOM05D000642 ORTHO05D000483 9.1e-15 85.1 45 93.3
BcaB04g20267 Brassica carinata HOM05D006564 ORTHO05D007772 1.2e-14 84.7 122 44.3
SHI13170 Sapria himalayana HOM05D000002 ORTHO05D001544 1.2e-14 84.7 45 91.1
BolC1t03666H Brassica oleracea HOM05D006564 ORTHO05D007772 1.6e-14 84.3 110 46.4
BraA01t03060Z Brassica rapa HOM05D006564 ORTHO05D007772 1.6e-14 84.3 110 44.5
SHI07194 Sapria himalayana HOM05D002539 ORTHO05D002876 1.6e-14 84.3 45 91.1
SHI09311 Sapria himalayana HOM05D004831 ORTHO05D003975 1.6e-14 84.3 45 91.1
SHI12413 Sapria himalayana HOM05D003943 ORTHO05D004753 1.6e-14 84.3 45 91.1
SHI12954 Sapria himalayana HOM05D007305 ORTHO05D003975 1.6e-14 84.3 44 93.2
SHI14099 Sapria himalayana HOM05D007305 ORTHO05D003975 1.6e-14 84.3 45 91.1
SHI26855 Sapria himalayana HOM05D007305 ORTHO05D003975 1.6e-14 84.3 45 91.1
SHI41656 Sapria himalayana HOM05D000002 ORTHO05D000001 1.6e-14 84.3 44 93.2
SHI21384 Sapria himalayana HOM05D000003 ORTHO05D000126 2.0e-14 84.0 45 91.1
CARHR052570 Cardamine hirsuta HOM05D006564 ORTHO05D007772 2.6e-14 83.6 110 44.5
SHI01057 Sapria himalayana HOM05D007349 ORTHO05D009317 2.6e-14 83.6 45 91.1
BcaC09g49405 Brassica carinata HOM05D006564 ORTHO05D007772 3.5e-14 83.2 110 46.4
C01p37040 Brassica napus HOM05D006564 ORTHO05D007772 3.5e-14 83.2 110 46.4
Nitab4.5_0004611g0020 Nicotiana tabacum HOM05D006564 ORTHO05D007772 3.5e-14 83.2 105 42.9
SHI38648 Sapria himalayana HOM05D000035 ORTHO05D000031 3.5e-14 83.2 68 69.1
Aa31LG2G9990 Aethionema arabicum HOM05D006564 ORTHO05D007772 4.5e-14 82.8 109 45.0
ECA234G3669 Erigeron canadensis HOM05D006564 ORTHO05D007772 4.5e-14 82.8 108 38.9
SalBow1G6981 Salvia bowleyana HOM05D006564 ORTHO05D007772 4.5e-14 82.8 112 45.5
SHI12698 Sapria himalayana HOM05D007305 ORTHO05D003975 4.5e-14 82.8 45 91.1
SHI13090 Sapria himalayana HOM05D007305 ORTHO05D001544 4.5e-14 82.8 45 91.1
SHI33703 Sapria himalayana HOM05D000024 ORTHO05D000007 4.5e-14 82.8 45 91.1
SHI38445 Sapria himalayana HOM05D000024 ORTHO05D000007 4.5e-14 82.8 45 91.1
TWI75G0104 Tripterygium wilfordii HOM05D006564 ORTHO05D007772 4.5e-14 82.8 118 39.0
SHI28529 Sapria himalayana HOM05D007305 ORTHO05D003975 5.9e-14 82.4 45 88.9
SHI29777 Sapria himalayana HOM05D000002 ORTHO05D000001 5.9e-14 82.4 45 91.1
Migut.E00581 Erythranthe guttata HOM05D006564 ORTHO05D007772 7.7e-14 82.0 108 44.4
SHI00336 Sapria himalayana HOM05D007305 ORTHO05D003975 7.7e-14 82.0 45 88.9
SHI08161 Sapria himalayana HOM05D003992 ORTHO05D004329 7.7e-14 82.0 45 88.9
SHI32977 Sapria himalayana HOM05D000002 ORTHO05D000001 7.7e-14 82.0 88 56.8
Hund06002 Selenicereus undatus HOM05D006564 ORTHO05D007772 7.7e-14 82.0 111 42.3
SHI06089 Sapria himalayana HOM05D007305 ORTHO05D003975 1.0e-13 81.6 45 91.1
SHI06173 Sapria himalayana HOM05D004020 ORTHO05D003975 1.0e-13 81.6 44 90.9
SHI26732 Sapria himalayana HOM05D000117 ORTHO05D000070 1.0e-13 81.6 45 88.9
SHI39861 Sapria himalayana HOM05D000035 ORTHO05D000031 1.0e-13 81.6 44 93.2
Haze_12197 Corylus avellana HOM05D006564 ORTHO05D007772 1.3e-13 81.3 94 45.7
SHI32091 Sapria himalayana HOM05D000107 ORTHO05D000062 1.3e-13 81.3 45 88.9
SHI50599 Sapria himalayana HOM05D000035 ORTHO05D003975 1.3e-13 81.3 80 60.0
SHI04553 Sapria himalayana HOM05D000024 ORTHO05D000007 1.7e-13 80.9 45 86.7
SHI26958 Sapria himalayana HOM05D007305 ORTHO05D003975 1.7e-13 80.9 45 86.7
SHI34242 Sapria himalayana HOM05D004560 ORTHO05D005540 1.7e-13 80.9 44 90.9
SHI09653 Sapria himalayana HOM05D007305 ORTHO05D003975 2.2e-13 80.5 45 88.9
SHI14031 Sapria himalayana HOM05D007305 ORTHO05D003975 2.9e-13 80.1 44 90.9
SHI27839 Sapria himalayana HOM05D000105 ORTHO05D000023 2.9e-13 80.1 45 86.7
Atru.chr11.2047 Acer truncatum HOM05D006564 ORTHO05D007772 3.8e-13 79.7 81 51.9
SHI10685 Sapria himalayana HOM05D000023 ORTHO05D000014 3.8e-13 79.7 71 66.2
SHI14039 Sapria himalayana HOM05D000002 ORTHO05D000001 3.8e-13 79.7 45 88.9
SHI17753 Sapria himalayana HOM05D000099 ORTHO05D000205 3.8e-13 79.7 58 70.7
SHI24314 Sapria himalayana HOM05D007305 ORTHO05D003975 5.0e-13 79.3 73 60.3
SHI28533 Sapria himalayana HOM05D000105 ORTHO05D000023 5.0e-13 79.3 68 60.3
SHI38650 Sapria himalayana HOM05D000035 ORTHO05D000031 5.0e-13 79.3 45 88.9
PSO063G0329 Papaver somniferum HOM05D006564 ORTHO05D007772 6.5e-13 79.0 107 42.1
SHI14194 Sapria himalayana HOM05D007305 ORTHO05D003975 6.5e-13 79.0 43 90.7
SHI22840 Sapria himalayana HOM05D007305 ORTHO05D003975 8.5e-13 78.6 45 86.7
SHI40705 Sapria himalayana HOM05D007305 ORTHO05D003975 8.5e-13 78.6 80 58.8
SHI09109 Sapria himalayana HOM05D000726 ORTHO05D000799 1.1e-12 78.2 44 90.9
SHI17939 Sapria himalayana HOM05D007305 ORTHO05D003975 1.5e-12 77.8 45 86.7
SHI46130 Sapria himalayana HOM05D000035 ORTHO05D003975 1.9e-12 77.4 68 64.7
VMungo1215G0480 Vigna mungo HOM05D006564 ORTHO05D007772 2.5e-12 77.0 108 39.8
SHI16572 Sapria himalayana HOM05D000347 ORTHO05D000694 3.2e-12 76.6 45 84.4
SHI17081 Sapria himalayana HOM05D000002 ORTHO05D001544 3.2e-12 76.6 44 86.4
SHI21071 Sapria himalayana HOM05D007305 ORTHO05D003975 5.5e-12 75.9 44 84.1
SHI33179 Sapria himalayana HOM05D007305 ORTHO05D003975 7.2e-12 75.5 45 84.4
HPP92_021828 Vanilla planifolia HOM05D006564 ORTHO05D007772 9.4e-12 75.1 112 42.0
SHI11922 Sapria himalayana HOM05D000002 ORTHO05D003034 1.2e-11 74.7 45 84.4
SHI12251 Sapria himalayana HOM05D006202 ORTHO05D008227 1.2e-11 74.7 45 82.2
SHI10179 Sapria himalayana HOM05D000002 ORTHO05D000001 2.1e-11 73.9 45 82.2
SHI47930 Sapria himalayana HOM05D000035 ORTHO05D000031 2.1e-11 73.9 44 84.1
Solyc06g065620.2 Solanum lycopersicum HOM05D006564 ORTHO05D007772 2.1e-11 73.9 97 41.2
CsaV3_2G024630 Cucumis sativus L. HOM05D006564 ORTHO05D007772 2.7e-11 73.6 93 43.0
Gohir.D06G182100 Gossypium hirsutum HOM05D006564 ORTHO05D007772 2.7e-11 73.6 59 61.0
MBI16_g27088_MAGBIO Magnolia biondii HOM05D006564 ORTHO05D007772 2.7e-11 73.6 121 38.0
SHI27979 Sapria himalayana HOM05D000105 ORTHO05D000023 3.6e-11 73.2 44 84.1
SHI44604 Sapria himalayana HOM05D000035 ORTHO05D000031 3.6e-11 73.2 45 82.2
ClCG08G017970 Citrullus lanatus HOM05D006564 ORTHO05D007772 6.1e-11 72.4 92 42.4
MELO3C010665.2 Cucumis melo HOM05D006564 ORTHO05D007772 1.0e-10 71.6 159 32.1
SHI03242 Sapria himalayana HOM05D004574 ORTHO05D005612 1.0e-10 71.6 44 84.1
SHI29301 Sapria himalayana HOM05D008814 ORTHO05D010812 1.0e-10 71.6 44 84.1
Rhsim12G0044200 Rhododendron simsii HOM05D006564 ORTHO05D007772 1.4e-10 71.2 88 44.3
SHI03791 Sapria himalayana HOM05D000030 ORTHO05D007344 3.0e-10 70.1 44 79.5
SHI11815 Sapria himalayana HOM05D007305 ORTHO05D003975 6.7e-10 68.9 45 71.1
Os06g0708200 Oryza sativa ssp. japonica HOM05D006564 ORTHO05D007772 8.8e-10 68.6 114 39.5
SGA_v2.0_scaffold276G46631 Striga asiatica HOM05D006564 ORTHO05D007772 8.8e-10 68.6 109 34.9
SHI29910 Sapria himalayana HOM05D000105 ORTHO05D000023 1.1e-09 68.2 98 51.0
SHI05083 Sapria himalayana HOM05D000002 ORTHO05D000001 2.6e-09 67.0 42 78.6
EL10Ac6g13691 Beta vulgaris HOM05D006564 ORTHO05D007772 7.5e-09 65.5 116 33.6
SHI03487 Sapria himalayana HOM05D002033 ORTHO05D003975 7.5e-09 65.5 42 76.2
SHI28769 Sapria himalayana HOM05D007305 ORTHO05D003975 1.3e-08 64.7 36 88.9
Oeu056406.1 Olea europaea HOM05D006564 ORTHO05D007772 1.7e-08 64.3 63 47.6
SHI21765 Sapria himalayana HOM05D000002 ORTHO05D003975 2.8e-08 63.5 43 76.7
Cc11_g15240 Coffea canephora HOM05D006564 ORTHO05D007772 3.7e-08 63.2 83 42.2
SHI38313 Sapria himalayana HOM05D000616 ORTHO05D000233 1.4e-07 61.2 93 46.2
Sopen06g024060 Solanum pennellii HOM05D006564 ORTHO05D007772 1.8e-07 60.8 70 42.9
SHI34882 Sapria himalayana HOM05D000392 ORTHO05D000610 3.1e-07 60.1 52 63.5
Lalb_Chr05g0216821 Lupinus albus HOM05D006564 ORTHO05D007772 1.6e-06 57.8 121 29.8


User provided reference genes

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