Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI17000 Sapria himalayana HOM05D001734 ORTHO05D033929 1.2e-112 409.8 200 100.0
Potri.015G076650 Populus trichocarpa HOM05D001734 ORTHO05D003483 7.3e-22 108.2 193 37.8
Sabra15G0101700 Salix brachista HOM05D001734 ORTHO05D003483 7.3e-22 108.2 193 37.3
Manes.06G105000 Manihot esculenta HOM05D001734 ORTHO05D003483 1.5e-19 100.5 193 33.2
RcHm_v2.0_Chr6g0271131 Rosa chinensis HOM05D001734 ORTHO05D003483 2.6e-19 99.8 198 34.8
QL10p011601 Quercus lobata HOM05D001734 ORTHO05D003483 5.8e-19 98.6 192 34.9
Atru.chr9.2479 Acer truncatum HOM05D001734 ORTHO05D003483 8.3e-18 94.7 191 34.0
Haze_07473 Corylus avellana HOM05D001734 ORTHO05D003483 8.3e-18 94.7 193 33.7
Prupe.5G173600 Prunus persica HOM05D001734 ORTHO05D003483 4.1e-17 92.4 191 31.9
Thecc.03G012800 Theobroma cacao HOM05D001734 ORTHO05D003483 4.1e-17 92.4 192 33.3
CSS0000775 Camellia sinensis var. sinensis HOM05D001734 ORTHO05D033929 5.4e-17 92.0 195 31.8
CiPaw.11G026100 Carya illinoinensis HOM05D001734 ORTHO05D003483 5.4e-17 92.0 192 31.8
PSO063G7150 Papaver somniferum HOM05D001734 ORTHO05D003483 5.4e-17 92.0 193 32.1
Cpa.g.sc76.53 Carica papaya HOM05D001734 ORTHO05D003483 7.1e-17 91.7 192 33.9
PSO063G0326 Papaver somniferum HOM05D001734 ORTHO05D003483 9.2e-17 91.3 193 32.1
Eucgr.K02842 Eucalyptus grandis HOM05D001734 ORTHO05D003483 1.6e-16 90.5 192 32.8
PGR044G0033 Punica granatum HOM05D001734 ORTHO05D003483 2.1e-16 90.1 191 32.5
Dinv20652 Davidia involucrata HOM05D001734 ORTHO05D003483 2.7e-16 89.7 192 31.8
FAN15G3378 Fragaria x ananassa HOM05D001734 ORTHO05D003483 3.5e-16 89.4 194 32.5
FvH4_2g11670 Fragaria vesca HOM05D001734 ORTHO05D003483 4.6e-16 89.0 194 32.5
MD06G1173700 Malus domestica HOM05D001734 ORTHO05D003483 4.6e-16 89.0 192 31.8
Duzib084G0583 Durio zibethinus HOM05D001734 ORTHO05D003483 6.0e-16 88.6 192 31.8
COL.COLO4_30039 Corchorus olitorius HOM05D001734 ORTHO05D003483 7.8e-16 88.2 192 32.8
TAR629G1256 Trochodendron aralioides HOM05D001734 ORTHO05D003483 2.3e-15 86.7 193 32.1
FAN05G4580 Fragaria x ananassa HOM05D001734 ORTHO05D003483 3.9e-15 85.9 194 32.0
TWI14G0283 Tripterygium wilfordii HOM05D001734 ORTHO05D003483 3.9e-15 85.9 195 31.3
Gorai.006G189100 Gossypium raimondii HOM05D001734 ORTHO05D003483 1.1e-14 84.3 199 33.7
Gohir.A09G171700 Gossypium hirsutum HOM05D001734 ORTHO05D003483 3.3e-14 82.8 195 33.8
arahy.Tifrunner.gnm1.ann1.2D0TBT Arachis hypogaea HOM05D001734 ORTHO05D003483 4.3e-14 82.4 193 33.2
Actinidia19322 Actinidia chinensis HOM05D001734 ORTHO05D003483 7.3e-14 81.6 193 30.1
Carub.0005s1431 Capsella rubella HOM05D001734 ORTHO05D003483 1.2e-13 80.9 192 33.9
Cfa019134 Carpinus fangiana HOM05D001734 ORTHO05D003483 1.2e-13 80.9 166 32.5
Gohir.D09G167401 Gossypium hirsutum HOM05D001734 ORTHO05D003483 2.8e-13 79.7 195 33.3
Hund02744 Selenicereus undatus HOM05D001734 ORTHO05D003483 2.8e-13 79.7 192 29.2
ClCG06G017040 Citrullus lanatus HOM05D001734 ORTHO05D003483 3.6e-13 79.3 192 29.2
MELO3C017087.2 Cucumis melo HOM05D001734 ORTHO05D003483 3.6e-13 79.3 191 29.8
Sc04g0001800 Simmondsia chinensis HOM05D001734 ORTHO05D003483 1.1e-12 77.8 192 32.8
Aqoxy3G02937 Aquilegia oxysepala HOM05D001734 ORTHO05D003483 1.4e-12 77.4 193 30.6
CARHR156920 Cardamine hirsuta HOM05D001734 ORTHO05D003483 1.8e-12 77.0 194 34.0
Ca_16176_v3 Cicer arietinum L. HOM05D001734 ORTHO05D003483 2.4e-12 76.6 191 28.8
Medtr3g077860 Medicago truncatula HOM05D001734 ORTHO05D003483 2.4e-12 76.6 192 30.2
Nn4g22757 Nelumbo nucifera HOM05D001734 ORTHO05D003483 3.1e-12 76.3 193 26.4
CANSAT80G1574 Cannabis sativa HOM05D001734 ORTHO05D003483 4.0e-12 75.9 193 29.5
Aa31LG4G16790 Aethionema arabicum HOM05D001734 ORTHO05D003483 5.2e-12 75.5 191 31.4
CsaV3_1G001470 Cucumis sativus L. HOM05D001734 ORTHO05D003483 5.2e-12 75.5 191 28.8
Psat5g114800 Pisum sativum HOM05D001734 ORTHO05D003483 1.2e-11 74.3 192 29.7
Sp5g13840 Schrenkiella parvula HOM05D001734 ORTHO05D003483 1.2e-11 74.3 192 33.3
A06p27460 Brassica napus HOM05D001734 ORTHO05D003483 2.0e-11 73.6 191 31.4
C03p66700 Brassica napus HOM05D001734 ORTHO05D003483 2.0e-11 73.6 191 31.4
BraA06t25686Z Brassica rapa HOM05D001734 ORTHO05D003483 2.0e-11 73.6 191 31.4
AT3G48190 Arabidopsis thaliana HOM05D001734 ORTHO05D003483 2.6e-11 73.2 191 30.9
CSS0041674 Camellia sinensis var. sinensis HOM05D001734 ORTHO05D033929 2.6e-11 73.2 196 31.1
Lsat_1_v5_gn_1_27061 Lactuca sativa HOM05D001734 ORTHO05D003483 4.4e-11 72.4 194 27.8
BolC3t18938H Brassica oleracea HOM05D001734 ORTHO05D003483 5.8e-11 72.0 191 31.4
Thhalv10010050m.g Eutrema salsugineum HOM05D001734 ORTHO05D003483 9.9e-11 71.2 192 32.8
HanXRQChr02g0036361 Helianthus annuus HOM05D001734 ORTHO05D003483 9.9e-11 71.2 193 28.0
Sed0023277 Sechium edule HOM05D001734 ORTHO05D003483 9.9e-11 71.2 194 27.8
DCAR_026136 Daucus carota HOM05D001734 ORTHO05D003483 1.7e-10 70.5 191 31.4
Lalb_Chr08g0236501 Lupinus albus HOM05D001734 ORTHO05D003483 1.7e-10 70.5 191 28.3
AL5G27530 Arabidopsis lyrata HOM05D001734 ORTHO05D003483 2.2e-10 70.1 191 30.9
AUR62030960 Chenopodium quinoa HOM05D001734 ORTHO05D003483 2.2e-10 70.1 197 29.4
THA.LOC104818218 Tarenaya hassleriana HOM05D001734 ORTHO05D003483 2.2e-10 70.1 193 31.6
Lj1g0011912 Lotus japonicus HOM05D001734 ORTHO05D003483 2.9e-10 69.7 192 28.6
Ciclev10018427m.g Citrus clementina HOM05D001734 ORTHO05D003483 1.4e-09 67.4 166 28.9
arahy.Tifrunner.gnm1.ann1.0L1HI6 Arachis hypogaea HOM05D001734 ORTHO05D003483 3.2e-09 66.2 191 28.3
EL10Ac5g10743 Beta vulgaris HOM05D001734 ORTHO05D003483 3.2e-09 66.2 192 28.6
AUR62008208 Chenopodium quinoa HOM05D001734 ORTHO05D003483 3.2e-09 66.2 192 29.2
Glyma.04G182900 Glycine max HOM05D001734 ORTHO05D003483 4.1e-09 65.9 192 28.6
ATR0730G231 Amborella trichopoda HOM05D001734 ORTHO05D003483 9.2e-09 64.7 192 27.6
FAN24G1896 Fragaria x ananassa HOM05D001734 ORTHO05D003483 2.7e-08 63.2 66 50.0
Phvul.009G178400 Phaseolus vulgaris HOM05D001734 ORTHO05D003483 3.5e-08 62.8 192 28.1
vmacro19388 Vaccinium macrocarpon HOM05D001734 ORTHO05D003483 6.0e-08 62.0 75 45.3
ECA247G1446 Erigeron canadensis HOM05D001734 ORTHO05D003483 7.8e-08 61.6 193 26.4
GSVIVG01007755001 Vitis vinifera HOM05D001734 ORTHO05D003483 1.0e-07 61.2 74 41.9
Oeu016387.4 Olea europaea HOM05D001734 ORTHO05D003483 2.3e-07 60.1 197 27.9
FAN20G1174 Fragaria x ananassa HOM05D001734 ORTHO05D003483 7.3e-06 55.1 74 40.5


User provided reference genes

Program Settings