Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI16994 Sapria himalayana HOM05D001734 ORTHO05D003483 6.1e-109 397.5 202 100.0
ECA247G1446 Erigeron canadensis HOM05D001734 ORTHO05D003483 1.4e-33 147.1 130 59.2
GSVIVG01007755001 Vitis vinifera HOM05D001734 ORTHO05D003483 1.3e-31 140.6 130 58.5
Lalb_Chr08g0236501 Lupinus albus HOM05D001734 ORTHO05D003483 1.7e-31 140.2 132 56.1
MD06G1173700 Malus domestica HOM05D001734 ORTHO05D003483 2.3e-31 139.8 134 54.5
Dinv20652 Davidia involucrata HOM05D001734 ORTHO05D003483 3.0e-31 139.4 130 58.5
Gohir.D09G167401 Gossypium hirsutum HOM05D001734 ORTHO05D003483 3.9e-31 139.0 84 77.4
Gorai.006G189100 Gossypium raimondii HOM05D001734 ORTHO05D003483 3.9e-31 139.0 84 77.4
Atru.chr9.2479 Acer truncatum HOM05D001734 ORTHO05D003483 6.6e-31 138.3 134 54.5
Ciclev10018427m.g Citrus clementina HOM05D001734 ORTHO05D003483 6.6e-31 138.3 135 52.6
Migut.I00009 Erythranthe guttata HOM05D001734 ORTHO05D003483 8.7e-31 137.9 130 55.4
Gohir.A09G171700 Gossypium hirsutum HOM05D001734 ORTHO05D003483 8.7e-31 137.9 84 77.4
Manes.06G105000 Manihot esculenta HOM05D001734 ORTHO05D003483 1.5e-30 137.1 130 53.8
arahy.Tifrunner.gnm1.ann1.0L1HI6 Arachis hypogaea HOM05D001734 ORTHO05D003483 1.9e-30 136.7 140 52.9
arahy.Tifrunner.gnm1.ann1.2D0TBT Arachis hypogaea HOM05D001734 ORTHO05D003483 2.5e-30 136.3 140 52.1
TAR629G1256 Trochodendron aralioides HOM05D001734 ORTHO05D003483 2.5e-30 136.3 123 59.3
Sabra15G0101700 Salix brachista HOM05D001734 ORTHO05D003483 3.3e-30 136.0 134 53.7
HanXRQChr02g0036361 Helianthus annuus HOM05D001734 ORTHO05D003483 4.3e-30 135.6 80 80.0
AUR62008208 Chenopodium quinoa HOM05D001734 ORTHO05D003483 9.6e-30 134.4 88 72.7
Prupe.5G173600 Prunus persica HOM05D001734 ORTHO05D003483 9.6e-30 134.4 130 53.8
Lj9A448G34 Lonicera japonica HOM05D001734 ORTHO05D003483 1.3e-29 134.0 84 76.2
Nn4g22757 Nelumbo nucifera HOM05D001734 ORTHO05D003483 1.3e-29 134.0 130 56.2
CiPaw.11G026100 Carya illinoinensis HOM05D001734 ORTHO05D003483 1.6e-29 133.7 130 54.6
AUR62030960 Chenopodium quinoa HOM05D001734 ORTHO05D003483 1.6e-29 133.7 88 71.6
Lsat_1_v5_gn_1_27061 Lactuca sativa HOM05D001734 ORTHO05D003483 1.6e-29 133.7 81 76.5
Oeu016387.4 Olea europaea HOM05D001734 ORTHO05D003483 1.6e-29 133.7 147 51.7
Potri.015G076650 Populus trichocarpa HOM05D001734 ORTHO05D003483 2.1e-29 133.3 140 50.7
Actinidia19322 Actinidia chinensis HOM05D001734 ORTHO05D003483 2.8e-29 132.9 80 76.2
EL10Ac5g10743 Beta vulgaris HOM05D001734 ORTHO05D003483 2.8e-29 132.9 80 75.0
Duzib084G0583 Durio zibethinus HOM05D001734 ORTHO05D003483 3.6e-29 132.5 84 73.8
FvH4_2g11670 Fragaria vesca HOM05D001734 ORTHO05D003483 3.6e-29 132.5 80 73.8
Glyma.04G182900 Glycine max HOM05D001734 ORTHO05D003483 4.8e-29 132.1 132 54.5
TWI14G0283 Tripterygium wilfordii HOM05D001734 ORTHO05D003483 6.2e-29 131.7 138 50.7
Eucgr.K02842 Eucalyptus grandis HOM05D001734 ORTHO05D003483 1.1e-28 131.0 85 69.4
FAN15G3378 Fragaria x ananassa HOM05D001734 ORTHO05D003483 1.1e-28 131.0 140 51.4
Psat5g114800 Pisum sativum HOM05D001734 ORTHO05D003483 1.1e-28 131.0 135 51.9
Cpa.g.sc76.54 Carica papaya HOM05D001734 ORTHO05D003483 1.4e-28 130.6 133 52.6
COL.COLO4_30039 Corchorus olitorius HOM05D001734 ORTHO05D003483 1.4e-28 130.6 131 51.1
Lj1g0011912 Lotus japonicus HOM05D001734 ORTHO05D003483 1.4e-28 130.6 127 55.1
Medtr3g077860 Medicago truncatula HOM05D001734 ORTHO05D003483 1.4e-28 130.6 84 71.4
Cfa019134 Carpinus fangiana HOM05D001734 ORTHO05D003483 1.8e-28 130.2 130 53.1
DCAR_026136 Daucus carota HOM05D001734 ORTHO05D003483 1.8e-28 130.2 79 78.5
Sc04g0001800 Simmondsia chinensis HOM05D001734 ORTHO05D003483 1.8e-28 130.2 133 52.6
SGA_v2.0_scaffold90G27914 Striga asiatica HOM05D001734 ORTHO05D003483 1.8e-28 130.2 147 50.3
Thecc.03G012800 Theobroma cacao HOM05D001734 ORTHO05D003483 1.8e-28 130.2 84 71.4
RcHm_v2.0_Chr6g0271131 Rosa chinensis HOM05D001734 ORTHO05D003483 2.4e-28 129.8 130 52.3
CANSAT80G1574 Cannabis sativa HOM05D001734 ORTHO05D003483 5.3e-28 128.6 80 73.8
Peaxi162Scf00009g00114 Petunia axillaris HOM05D001734 ORTHO05D003483 5.3e-28 128.6 83 71.1
PGR044G0033 Punica granatum HOM05D001734 ORTHO05D003483 5.3e-28 128.6 85 71.8
VMungo1309G0494 Vigna mungo HOM05D001734 ORTHO05D003483 5.3e-28 128.6 137 51.8
Aqoxy3G02937 Aquilegia oxysepala HOM05D001734 ORTHO05D003483 6.9e-28 128.3 130 56.9
QL10p011601 Quercus lobata HOM05D001734 ORTHO05D003483 6.9e-28 128.3 130 53.1
Haze_07473 Corylus avellana HOM05D001734 ORTHO05D003483 9.0e-28 127.9 80 72.5
Phvul.009G178400 Phaseolus vulgaris HOM05D001734 ORTHO05D003483 9.0e-28 127.9 84 72.6
TPR.G6034 Trifolium pratense HOM05D001734 ORTHO05D003483 1.5e-27 127.1 91 65.9
MELO3C017087.2 Cucumis melo HOM05D001734 ORTHO05D003483 2.6e-27 126.3 84 70.2
CsaV3_1G001470 Cucumis sativus L. HOM05D001734 ORTHO05D003483 2.6e-27 126.3 84 70.2
Solyc03g112950.4 Solanum lycopersicum HOM05D001734 ORTHO05D003483 2.6e-27 126.3 130 52.3
Sopen03g032020 Solanum pennellii HOM05D001734 ORTHO05D003483 2.6e-27 126.3 130 52.3
FAN20G1266 Fragaria x ananassa HOM05D001734 ORTHO05D003483 3.4e-27 125.9 80 70.0
Hund02744 Selenicereus undatus HOM05D001734 ORTHO05D003483 5.8e-27 125.2 95 63.2
ATR0730G231 Amborella trichopoda HOM05D001734 ORTHO05D003483 7.6e-27 124.8 87 67.8
CAN.G1305.19 Capsicum annuum HOM05D001734 ORTHO05D003483 7.6e-27 124.8 130 52.3
Nitab4.5_0000984g0090 Nicotiana tabacum HOM05D001734 ORTHO05D003483 7.6e-27 124.8 82 70.7
MSTRG.11455 Avicennia marina HOM05D001734 ORTHO05D003483 1.7e-26 123.6 130 52.3
Sed0023277 Sechium edule HOM05D001734 ORTHO05D003483 1.7e-26 123.6 130 53.8
HPP92_004868 Vanilla planifolia HOM05D001734 ORTHO05D003483 1.7e-26 123.6 80 67.5
Ca_16176_v3 Cicer arietinum L. HOM05D001734 ORTHO05D003483 2.2e-26 123.2 80 68.8
THA.LOC104818218 Tarenaya hassleriana HOM05D001734 ORTHO05D003483 4.9e-26 122.1 88 63.6
unitig_0.g1441 Utricularia gibba HOM05D001734 ORTHO05D003483 1.1e-25 120.9 87 65.5
PSO063G0326 Papaver somniferum HOM05D001734 ORTHO05D003483 1.4e-25 120.6 80 71.2
PSO063G7150 Papaver somniferum HOM05D001734 ORTHO05D003483 1.4e-25 120.6 80 71.2
arahy.Tifrunner.gnm1.ann1.VRLT2G Arachis hypogaea HOM05D000411 ORTHO05D003483 9.3e-25 117.9 89 65.2
Carub.0005s1431 Capsella rubella HOM05D001734 ORTHO05D003483 1.6e-24 117.1 95 55.8
CDE07G1059 Ceratophyllum demersum HOM05D001734 ORTHO05D003483 3.5e-24 115.9 92 59.8
SEGI_27751 Sequoiadendron giganteum HOM05D001734 ORTHO05D003483 6.0e-24 115.2 75 70.7
AL5G27530 Arabidopsis lyrata HOM05D001734 ORTHO05D003483 7.9e-24 114.8 84 60.7
AT3G48190 Arabidopsis thaliana HOM05D001734 ORTHO05D003483 7.9e-24 114.8 95 54.7
CARHR156920 Cardamine hirsuta HOM05D001734 ORTHO05D003483 1.0e-23 114.4 84 60.7
FAN24G1896 Fragaria x ananassa HOM05D001734 ORTHO05D003483 1.3e-23 114.0 117 50.4
A06p27460 Brassica napus HOM05D001734 ORTHO05D003483 3.0e-23 112.8 95 52.6
BraA06t25687Z Brassica rapa HOM05D001734 ORTHO05D003483 3.0e-23 112.8 95 52.6
Thhalv10010050m.g Eutrema salsugineum HOM05D001734 ORTHO05D003483 3.9e-23 112.5 95 52.6
SalBow5G1563 Salvia bowleyana HOM05D001734 ORTHO05D003483 3.9e-23 112.5 130 49.2
Sp5g13840 Schrenkiella parvula HOM05D001734 ORTHO05D003483 3.9e-23 112.5 84 59.5
C03p66700 Brassica napus HOM05D001734 ORTHO05D003483 8.7e-23 111.3 95 51.6
Mapoly0081s0051 Marchantia polymorpha HOM05D001734 ORTHO05D003483 8.7e-23 111.3 80 62.5
Pp3c2_23700 Physcomitrium patens HOM05D001734 ORTHO05D003483 4.8e-21 105.5 80 58.8
BolC3t18938H Brassica oleracea HOM05D001734 ORTHO05D003483 6.2e-21 105.1 113 44.2
FAN20G1174 Fragaria x ananassa HOM05D001734 ORTHO05D003483 1.4e-20 104.0 62 72.6
SMO298G0008 Selaginella moellendorffii HOM05D001734 ORTHO05D003483 1.4e-20 104.0 82 58.5
AagrBONN_evm.TU.Sc2ySwM_117.1596 Anthoceros agrestis HOM05D001734 ORTHO05D003483 3.1e-20 102.8 132 43.9
Aa31LG4G16790 Aethionema arabicum HOM05D001734 ORTHO05D003483 6.9e-20 101.7 120 43.3
Zm00001eb126710 Zea mays HOM05D001734 ORTHO05D003483 7.6e-19 98.2 92 51.1
Os01g0106700 Oryza sativa ssp. japonica HOM05D001734 ORTHO05D003483 7.1e-17 91.7 92 50.0
CBR_g292 Chara braunii HOM05D001734 ORTHO05D003483 1.3e-15 87.4 79 49.4
Nitab4.5_0000785g0010 Nicotiana tabacum HOM05D001734 ORTHO05D003483 2.3e-15 86.7 53 66.0
ClCG06G017040 Citrullus lanatus HOM05D001734 ORTHO05D003483 1.0e-07 61.2 79 45.6
Rhsim02G0102500 Rhododendron simsii HOM05D001734 ORTHO05D003483 1.3e-07 60.8 50 58.0
QL05p026262 Quercus lobata HOM05D001734 ORTHO05D003483 9.7e-06 54.7 80 42.5


User provided reference genes

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